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The map label for this gene is yqjF [H]

Identifier: 94313021

GI number: 94313021

Start: 662912

End: 663334

Strand: Direct

Name: yqjF [H]

Synonym: Rmet_4094

Alternate gene names: 94313021

Gene position: 662912-663334 (Clockwise)

Preceding gene: 94313020

Following gene: 94313022

Centisome position: 25.69

GC content: 61.7

Gene sequence:

>423_bases
ATGGAACACAACAAGTACTACCCGCTACTCGGCCGCATCATGCTCGGTGCGCCATTTCTCATGAGCGGTCTCGGAAAACT
GGCCGCATATGGCGGCACCGTTGGCTATATTTCCGCAGTCGGCCTGCCTGTGGCACCGCTGGCGTACCTGATCGCGGTGG
CGGTCGAGGTGGGCGGCGGCATGATGCTGTTGTCGGGCTATCAGGTGCGTGCGGCGTCGCTAGTGATGGCGGCATTCTGC
GTGGCGACAGCCGTTTTCTTCCATCACAACTTCGCCGATCAGAATCAGATGATTCACTTCCTGAAGAACCTGATGATCGC
GGGCGGCCTTTTGCAGATCGCCAGCTTTGGCGCGGGCGCATGGAGCCTGGACGCGCGTCTTGCGGGGCCGGCGTCGCACA
AGACGGCGTTGCGGGCGAACTGA

Upstream 100 bases:

>100_bases
GTCGCGGCGCTTGAACACTCTGAACTGGTGATGGTGGAAACCCGTTGAGAGTCACTTGATCCATCCACCTCGAAGCATTT
TCGTCTGAAAGGACATGACC

Downstream 100 bases:

>100_bases
TATCGGCGATTGCTTGGCAAGCATGACGAATTGCCTGCAGGAGGCAACCAATGCAGAACAGTATTCCAACGCTGTTGCGG
CGCAATCTTGAAGAGGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MEHNKYYPLLGRIMLGAPFLMSGLGKLAAYGGTVGYISAVGLPVAPLAYLIAVAVEVGGGMMLLSGYQVRAASLVMAAFC
VATAVFFHHNFADQNQMIHFLKNLMIAGGLLQIASFGAGAWSLDARLAGPASHKTALRAN

Sequences:

>Translated_140_residues
MEHNKYYPLLGRIMLGAPFLMSGLGKLAAYGGTVGYISAVGLPVAPLAYLIAVAVEVGGGMMLLSGYQVRAASLVMAAFC
VATAVFFHHNFADQNQMIHFLKNLMIAGGLLQIASFGAGAWSLDARLAGPASHKTALRAN
>Mature_140_residues
MEHNKYYPLLGRIMLGAPFLMSGLGKLAAYGGTVGYISAVGLPVAPLAYLIAVAVEVGGGMMLLSGYQVRAASLVMAAFC
VATAVFFHHNFADQNQMIHFLKNLMIAGGLLQIASFGAGAWSLDARLAGPASHKTALRAN

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI87082210, Length=121, Percent_Identity=40.495867768595, Blast_Score=84, Evalue=2e-18,
Organism=Escherichia coli, GI145693171, Length=123, Percent_Identity=35.7723577235772, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14656; Mature: 14656

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHNKYYPLLGRIMLGAPFLMSGLGKLAAYGGTVGYISAVGLPVAPLAYLIAVAVEVGGG
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCC
MMLLSGYQVRAASLVMAAFCVATAVFFHHNFADQNQMIHFLKNLMIAGGLLQIASFGAGA
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
WSLDARLAGPASHKTALRAN
EECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEHNKYYPLLGRIMLGAPFLMSGLGKLAAYGGTVGYISAVGLPVAPLAYLIAVAVEVGGG
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCC
MMLLSGYQVRAASLVMAAFCVATAVFFHHNFADQNQMIHFLKNLMIAGGLLQIASFGAGA
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
WSLDARLAGPASHKTALRAN
EECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]