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The map label for this gene is caiA [C]

Identifier: 94313003

GI number: 94313003

Start: 643250

End: 644245

Strand: Direct

Name: caiA [C]

Synonym: Rmet_4075

Alternate gene names: 94313003

Gene position: 643250-644245 (Clockwise)

Preceding gene: 94313002

Following gene: 291481508

Centisome position: 24.93

GC content: 66.47

Gene sequence:

>996_bases
ATGTACAACGAATACTCGGAAGCACTGGAAGTGCTACTGCGCGATCACTGCACGCCCGCTGTCGTGCGACAGATCGAGTC
CGGCGGCAGTGGCGCGGATCTCTGGCGCTTGCTCGATGAAAGCGGCTTCGCGGACAGCTTGCTGCCGGAAGCCGGGTTGA
GCCTGGCGGACGTCGCGCCGATGCTGTTCGTGATGGGCCGGCATGTGCTCCCGGTGCCGTTGGCGCAGACGATGTTTGCG
CGGGCCGTGCTGCGGATGGCGGGCGTCGAGGTGCCGGAGGGGCGGGAGGGGCCGGAAGGGTCTATTGCGCTGGCCGATCT
CGATGGTGCGCAACGCACGCATGTGCCGTGCGGCGCCACAGCAACGTGGTTTCTGGTGCAGGACGGCGCCCAGGCGGCGC
TCGTCCATCGCGATGCCGTGGCGCTTTCGCCCACTGGCGTGCGGGATGACCTGACGCTGTCGCTCGGGGAAATTGGCATG
CAACGTTTCCCGCAGCGCTTCCCATTGCCGGCAGGGCTGTTGCGTTCGGTGGGCGCGTGCCTGCACGCAGTGCAAATGGC
AGGTGCGATGTCGAGCGTGTTCGACTTGACGCTGCAATACGCCAATGACCGGGTGCAGTTCGGTCGCAACATCGGCAAGT
TCCAGGCGATCCAGCATCAGATCAGCGTGATGGCGGAGCAGGTGGCGGCGGTGCGCATGGCGGCACAGATCGCTTGCGCG
GCCGATGGCTGGCAACCTGACCGGCTGCGCGCGGCCATCGGAAAGTTCAATGCGAGTGATGCAGTGACGGCCGTGACGTC
GATCGCTCACGCGGTGCATGGCGCGATTGGTGTGACGGCGGAATACGACCTGCAGCTCTATACGCGCCGGCTGCACGCGT
GGCGGCTGGCGGATGGGTCGGAGCGGTACTGGGCGCGCGAACTTGGCGAGGCGACCTGTGAGGCCGATGGCCTGACCGTG
GACCTGATACGCGAGTGGAGCGGCGAGGCAGCGTAG

Upstream 100 bases:

>100_bases
CCAGAACCGCTTCGCTTCAATTTGATAGCGCCTCTAAGGGACACAGGGATGCAGGGACGCTAGTGATGCTGCGGGACGCT
TAAGGGATTAAGGAAGCACC

Downstream 100 bases:

>100_bases
TCGCAGGGACGGCCACGGCCCTCTCCACGCGGGAGCGGGCCGTCGTCGATCCTTGGTGTGCGTTACACGATCGTGTCGAC
CACACCGCCGTCAACGCGCA

Product: acyl-CoA dehydrogenase-like protein

Products: gamma-butyrobetaine; Acceptor; gamma-butyrobetainyl-CoA [C]

Alternate protein names: Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase C-Terminal; Acyl-CoA Dehydrogenase Domain Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase FadE; Acyl-CoA Dehydrogenase-Like Protein; Acyl-CoA Dehydrogenase C-Terminal Domain-Containing; Pimeloyl-CoA Dehydrogenase Small Subunit; Acyl-CoA Dehydrogenase Family Protein; Acyl-CoA Dehydrogenase Type 2 Domain-Containing Protein; Acyl-CoA Dehydrogenase N-Terminal Domain-Containing; Acyl-CoA Dehydrogenase C-; Acetyl-CoA Acetyltransferase; Acyl-CoA Dehydrogenase C-Terminal Domain Protein

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MYNEYSEALEVLLRDHCTPAVVRQIESGGSGADLWRLLDESGFADSLLPEAGLSLADVAPMLFVMGRHVLPVPLAQTMFA
RAVLRMAGVEVPEGREGPEGSIALADLDGAQRTHVPCGATATWFLVQDGAQAALVHRDAVALSPTGVRDDLTLSLGEIGM
QRFPQRFPLPAGLLRSVGACLHAVQMAGAMSSVFDLTLQYANDRVQFGRNIGKFQAIQHQISVMAEQVAAVRMAAQIACA
ADGWQPDRLRAAIGKFNASDAVTAVTSIAHAVHGAIGVTAEYDLQLYTRRLHAWRLADGSERYWARELGEATCEADGLTV
DLIREWSGEAA

Sequences:

>Translated_331_residues
MYNEYSEALEVLLRDHCTPAVVRQIESGGSGADLWRLLDESGFADSLLPEAGLSLADVAPMLFVMGRHVLPVPLAQTMFA
RAVLRMAGVEVPEGREGPEGSIALADLDGAQRTHVPCGATATWFLVQDGAQAALVHRDAVALSPTGVRDDLTLSLGEIGM
QRFPQRFPLPAGLLRSVGACLHAVQMAGAMSSVFDLTLQYANDRVQFGRNIGKFQAIQHQISVMAEQVAAVRMAAQIACA
ADGWQPDRLRAAIGKFNASDAVTAVTSIAHAVHGAIGVTAEYDLQLYTRRLHAWRLADGSERYWARELGEATCEADGLTV
DLIREWSGEAA
>Mature_331_residues
MYNEYSEALEVLLRDHCTPAVVRQIESGGSGADLWRLLDESGFADSLLPEAGLSLADVAPMLFVMGRHVLPVPLAQTMFA
RAVLRMAGVEVPEGREGPEGSIALADLDGAQRTHVPCGATATWFLVQDGAQAALVHRDAVALSPTGVRDDLTLSLGEIGM
QRFPQRFPLPAGLLRSVGACLHAVQMAGAMSSVFDLTLQYANDRVQFGRNIGKFQAIQHQISVMAEQVAAVRMAAQIACA
ADGWQPDRLRAAIGKFNASDAVTAVTSIAHAVHGAIGVTAEYDLQLYTRRLHAWRLADGSERYWARELGEATCEADGLTV
DLIREWSGEAA

Specific function: Catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.- [C]

Molecular weight: Translated: 35547; Mature: 35547

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNEYSEALEVLLRDHCTPAVVRQIESGGSGADLWRLLDESGFADSLLPEAGLSLADVAP
CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH
MLFVMGRHVLPVPLAQTMFARAVLRMAGVEVPEGREGPEGSIALADLDGAQRTHVPCGAT
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
ATWFLVQDGAQAALVHRDAVALSPTGVRDDLTLSLGEIGMQRFPQRFPLPAGLLRSVGAC
EEEEEEECCCCEEHEECCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LHAVQMAGAMSSVFDLTLQYANDRVQFGRNIGKFQAIQHQISVMAEQVAAVRMAAQIACA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADGWQPDRLRAAIGKFNASDAVTAVTSIAHAVHGAIGVTAEYDLQLYTRRLHAWRLADGS
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCC
ERYWARELGEATCEADGLTVDLIREWSGEAA
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MYNEYSEALEVLLRDHCTPAVVRQIESGGSGADLWRLLDESGFADSLLPEAGLSLADVAP
CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH
MLFVMGRHVLPVPLAQTMFARAVLRMAGVEVPEGREGPEGSIALADLDGAQRTHVPCGAT
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
ATWFLVQDGAQAALVHRDAVALSPTGVRDDLTLSLGEIGMQRFPQRFPLPAGLLRSVGAC
EEEEEEECCCCEEHEECCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LHAVQMAGAMSSVFDLTLQYANDRVQFGRNIGKFQAIQHQISVMAEQVAAVRMAAQIACA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADGWQPDRLRAAIGKFNASDAVTAVTSIAHAVHGAIGVTAEYDLQLYTRRLHAWRLADGS
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCC
ERYWARELGEATCEADGLTVDLIREWSGEAA
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: crotono-betaine; reduced acceptor; crotonobetainyl-CoA [C]

Specific reaction: reduced acceptor + crotono-betaine = Acceptor + gamma-butyrobetaine reduced acceptor + crotonobetainyl-CoA = Acceptor + gamma-butyrobetainyl-CoA [C]

General reaction: Oxidoreductases; Acting on the CH-CH group of donors; With other acceptors [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA