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The map label for this gene is ccmC [H]

Identifier: 94312986

GI number: 94312986

Start: 624657

End: 625436

Strand: Reverse

Name: ccmC [H]

Synonym: Rmet_4058

Alternate gene names: 94312986

Gene position: 625436-624657 (Counterclockwise)

Preceding gene: 94312987

Following gene: 291481506

Centisome position: 24.24

GC content: 68.33

Gene sequence:

>780_bases
ATGCAGCGCGACATTTCCCTCGACGCCAACGCCCATTCCCCACGCACCGCGCGGGCGCGCTGGCTGGCCTTTGCCGCGCC
AGTGCGCTTCTACCCGCTCGCGGGACGGCTTGCGCCCTGGTGTTTCGCCGTTGCGGCGCTGTTCCTGGCCCTCGGCCTGT
ACCTCGGATTCGTGGTGGCGCCCACCGATGCCCAGCAGGGCGAGGTCTACCGGATCATCTTCATCCACGTGCCGGCAGCG
TGGATGTCGATGTTCATCTACGTGGTCATGGCGGGCTGGTGTGCGCTGGCGCTGGTGCTGCGCACGCGGCTGTCCTCGAT
GATGGCGTCGGCGCTGGCGCCCACGGGCGCGATGTTCACGGTCATCGCGCTGTGGACCGGGGCACTCTGGGGCAAACCCA
CGTGGGGCACGTACTGGGTCTGGGACGCACGGCTGACGTCGGAGCTGATCCTGCTGTTCCTCTACCTCGGCTACATGGCG
CTGGAGGCGGCCATCGACGAGCCCCGTCGCGCCGAGCGCGCCTGCGCCGTGCTGGCGTTGGTCGGCGTGGCGAATGTGCC
AGTGATCTACTTTTCCGTGCAGTGGTGGAACACGCTGCACCAGGGCGCATCGGTCAGCCTGACCGCCGCGCCAACCATGG
CGGCCACGATGCTGGCCGGCATGTTGACGATGACGGTGGCCTGCTGGCTATACGCGATCGGCGTGGCGCTGGTGCGCCTG
CGCTGCATCCTGCGCGAGCGCGGCGAGATTGACACCGGCACCCTGGAGACCATGCCATGA

Upstream 100 bases:

>100_bases
ATCCCGCAATTTTCGCTACTCGGGGCCTGCCTGGCGCTATCGCTGTTCCTGTGTCCGCTGGCCACGGCGGCAGGCTTGCG
CATCGCCATGGAGTAACACG

Downstream 100 bases:

>100_bases
GCACGCTGAATCTCGACATGCTGGCCGGACACGCCGGCTATATCGCAAGCGCCTTCGGCATGACCTTCGTGCTAATCGCC
GCGGAACTGATCCTGCTCTG

Product: cytochrome C biogenesis protein; heme exporter protein

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MQRDISLDANAHSPRTARARWLAFAAPVRFYPLAGRLAPWCFAVAALFLALGLYLGFVVAPTDAQQGEVYRIIFIHVPAA
WMSMFIYVVMAGWCALALVLRTRLSSMMASALAPTGAMFTVIALWTGALWGKPTWGTYWVWDARLTSELILLFLYLGYMA
LEAAIDEPRRAERACAVLALVGVANVPVIYFSVQWWNTLHQGASVSLTAAPTMAATMLAGMLTMTVACWLYAIGVALVRL
RCILRERGEIDTGTLETMP

Sequences:

>Translated_259_residues
MQRDISLDANAHSPRTARARWLAFAAPVRFYPLAGRLAPWCFAVAALFLALGLYLGFVVAPTDAQQGEVYRIIFIHVPAA
WMSMFIYVVMAGWCALALVLRTRLSSMMASALAPTGAMFTVIALWTGALWGKPTWGTYWVWDARLTSELILLFLYLGYMA
LEAAIDEPRRAERACAVLALVGVANVPVIYFSVQWWNTLHQGASVSLTAAPTMAATMLAGMLTMTVACWLYAIGVALVRL
RCILRERGEIDTGTLETMP
>Mature_259_residues
MQRDISLDANAHSPRTARARWLAFAAPVRFYPLAGRLAPWCFAVAALFLALGLYLGFVVAPTDAQQGEVYRIIFIHVPAA
WMSMFIYVVMAGWCALALVLRTRLSSMMASALAPTGAMFTVIALWTGALWGKPTWGTYWVWDARLTSELILLFLYLGYMA
LEAAIDEPRRAERACAVLALVGVANVPVIYFSVQWWNTLHQGASVSLTAAPTMAATMLAGMLTMTVACWLYAIGVALVRL
RCILRERGEIDTGTLETMP

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=181, Percent_Identity=52.4861878453039, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 28499; Mature: 28499

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRDISLDANAHSPRTARARWLAFAAPVRFYPLAGRLAPWCFAVAALFLALGLYLGFVVA
CCCCCCCCCCCCCCCHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHEEC
PTDAQQGEVYRIIFIHVPAAWMSMFIYVVMAGWCALALVLRTRLSSMMASALAPTGAMFT
CCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VIALWTGALWGKPTWGTYWVWDARLTSELILLFLYLGYMALEAAIDEPRRAERACAVLAL
HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VGVANVPVIYFSVQWWNTLHQGASVSLTAAPTMAATMLAGMLTMTVACWLYAIGVALVRL
HHHCCCCEEEEEEHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCILRERGEIDTGTLETMP
HHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQRDISLDANAHSPRTARARWLAFAAPVRFYPLAGRLAPWCFAVAALFLALGLYLGFVVA
CCCCCCCCCCCCCCCHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHEEC
PTDAQQGEVYRIIFIHVPAAWMSMFIYVVMAGWCALALVLRTRLSSMMASALAPTGAMFT
CCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VIALWTGALWGKPTWGTYWVWDARLTSELILLFLYLGYMALEAAIDEPRRAERACAVLAL
HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VGVANVPVIYFSVQWWNTLHQGASVSLTAAPTMAATMLAGMLTMTVACWLYAIGVALVRL
HHHCCCCEEEEEEHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCILRERGEIDTGTLETMP
HHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]