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The map label for this gene is mmfR [H]

Identifier: 94312967

GI number: 94312967

Start: 605750

End: 606415

Strand: Direct

Name: mmfR [H]

Synonym: Rmet_4039

Alternate gene names: 94312967

Gene position: 605750-606415 (Clockwise)

Preceding gene: 94312966

Following gene: 94312968

Centisome position: 23.48

GC content: 62.16

Gene sequence:

>666_bases
ATGCGGGTATTGCTTGTCGAAGACGATCCCATGATCGGTGACGCGATCCAGGGCGCATTGAAGGATGCGTCCTACGCCGC
CGACTGGGTGAAGGACGGGCAGACGGCGCTCACCACGCTGGGCTGCCAGCATTACGACCTGGTGCTACTCGACCTCGGTC
TGCCCGGAAAGGATGGGCTGGAGGTGCTGGCCAGCATCCGAGCCAAGGACAACCCGGTTCCCCTGCTCATCATCACGGCT
CGCGATGGTCTGGATGATCGCCTGCGCGGCCTGGATGGCGGGGCCGACGACTATGTGTCCAAGCCCTTTCAGATGGCGGA
ACTGCTGGCCCGGATGCGCGCCGTCCTGAGGCGCAAAGGTGGCACGGCAGCTCCCGTGCTCAGCAACGGCGTGGTGACGC
TTGACCCGGCCACCAAAGAGGCTTGTGCCAATGATGGCCCCCAAGTGCAACTGTCCAACCGCGAGTTCTCGTTACTGCAA
GCCTTGCTGGTTCGGCCTGGTGCCATCCTTTCGCGCAGCGAACTGGAGGATCGCATCTATGGCTGGGGGGAAGAAGTCGA
AAGCAATGCCGTCGAATATCTAATCCACGCACTGCGGCGCAAGCTCGGTGGCGAGGTCATCAAGAACGTCAGGGGGGTCG
GATGGATGGTCTCAAAAGGCGCTTGA

Upstream 100 bases:

>100_bases
GCATCGGCCGCACTGTTGGCCTTCATGCTGACTGCGATCCTGCTGTTCAGGCAGAGAGCAGCCAGGACGGCACATTGAAC
AACGATTGAACGGAGGGGGA

Downstream 100 bases:

>100_bases
ACGAATCAGTTCAGCTCAAGCTGTCCTTCACCTTGTCGCTGGCCATCCTCGTGGTGGCCGTTGTGGCGGGCGTATTCTCG
TTCCTGTCCGCCTTCGATGA

Product: winged helix family two component transcriptional regulator (Tn6048)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRVLLVEDDPMIGDAIQGALKDASYAADWVKDGQTALTTLGCQHYDLVLLDLGLPGKDGLEVLASIRAKDNPVPLLIITA
RDGLDDRLRGLDGGADDYVSKPFQMAELLARMRAVLRRKGGTAAPVLSNGVVTLDPATKEACANDGPQVQLSNREFSLLQ
ALLVRPGAILSRSELEDRIYGWGEEVESNAVEYLIHALRRKLGGEVIKNVRGVGWMVSKGA

Sequences:

>Translated_221_residues
MRVLLVEDDPMIGDAIQGALKDASYAADWVKDGQTALTTLGCQHYDLVLLDLGLPGKDGLEVLASIRAKDNPVPLLIITA
RDGLDDRLRGLDGGADDYVSKPFQMAELLARMRAVLRRKGGTAAPVLSNGVVTLDPATKEACANDGPQVQLSNREFSLLQ
ALLVRPGAILSRSELEDRIYGWGEEVESNAVEYLIHALRRKLGGEVIKNVRGVGWMVSKGA
>Mature_221_residues
MRVLLVEDDPMIGDAIQGALKDASYAADWVKDGQTALTTLGCQHYDLVLLDLGLPGKDGLEVLASIRAKDNPVPLLIITA
RDGLDDRLRGLDGGADDYVSKPFQMAELLARMRAVLRRKGGTAAPVLSNGVVTLDPATKEACANDGPQVQLSNREFSLLQ
ALLVRPGAILSRSELEDRIYGWGEEVESNAVEYLIHALRRKLGGEVIKNVRGVGWMVSKGA

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=219, Percent_Identity=44.2922374429224, Blast_Score=187, Evalue=6e-49,
Organism=Escherichia coli, GI1790552, Length=217, Percent_Identity=41.9354838709677, Blast_Score=167, Evalue=7e-43,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=34.5454545454545, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=36.3636363636364, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=32, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1786599, Length=224, Percent_Identity=33.0357142857143, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=32.8947368421053, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1790860, Length=220, Percent_Identity=35.4545454545455, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=33.920704845815, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1786911, Length=203, Percent_Identity=35.9605911330049, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=33.6244541484716, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787229, Length=223, Percent_Identity=28.2511210762332, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=28.6343612334802, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=28.8135593220339, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788550, Length=162, Percent_Identity=27.1604938271605, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1790299, Length=108, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=108, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 23845; Mature: 23845

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLVEDDPMIGDAIQGALKDASYAADWVKDGQTALTTLGCQHYDLVLLDLGLPGKDGL
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCHHH
EVLASIRAKDNPVPLLIITARDGLDDRLRGLDGGADDYVSKPFQMAELLARMRAVLRRKG
HHHHHHHCCCCCCCEEEEECCCCCHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCC
GTAAPVLSNGVVTLDPATKEACANDGPQVQLSNREFSLLQALLVRPGAILSRSELEDRIY
CCCCHHHCCCEEEECCCCHHHHCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHH
GWGEEVESNAVEYLIHALRRKLGGEVIKNVRGVGWMVSKGA
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCC
>Mature Secondary Structure
MRVLLVEDDPMIGDAIQGALKDASYAADWVKDGQTALTTLGCQHYDLVLLDLGLPGKDGL
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCHHH
EVLASIRAKDNPVPLLIITARDGLDDRLRGLDGGADDYVSKPFQMAELLARMRAVLRRKG
HHHHHHHCCCCCCCEEEEECCCCCHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCC
GTAAPVLSNGVVTLDPATKEACANDGPQVQLSNREFSLLQALLVRPGAILSRSELEDRIY
CCCCHHHCCCEEEECCCCHHHHCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHH
GWGEEVESNAVEYLIHALRRKLGGEVIKNVRGVGWMVSKGA
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]