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The map label for this gene is pcaH [H]

Identifier: 94312941

GI number: 94312941

Start: 583645

End: 584358

Strand: Direct

Name: pcaH [H]

Synonym: Rmet_4013

Alternate gene names: 94312941

Gene position: 583645-584358 (Clockwise)

Preceding gene: 291481505

Following gene: 94312942

Centisome position: 22.62

GC content: 64.85

Gene sequence:

>714_bases
ATGCCCCCACGCTCCGCCCGCCCGGACCAGTACCGTCGGCCGTACTGGAACACCCAGCCCGAGTACCGTTTCGATCCGTA
TGCCTCGACGCAACTCCGCTCGCCGAGCCAGTCGCTGATCGCCTTGCCGCAATCGCTTTCCGAGGTCACCGGCCCGACCT
TTGGCCCCGAGTTTGTCCGTGAGGGCGATAACGACCTGACCGTAGGCAACGGTGGCGAGCCGATCGGCGAACGTATCCTG
GTGACAGGCCGCGTGCTCGATGAAAACGGCCACCCGGTGCCGAATGCGCTGATCGAGGTCTGGCAAGCCAACGCCGCCGG
TCGTTACGTGCACAAGCGCGACCAGCACGATGCGCCGCTCGACCCGCACTTCTCGGGCCAGGGCCGCACCATCACGGATG
CCGACGGCCGCTACCAGTTCAAGACGATCAAGCCCGGCGCCTATCCGTGGCGCAACCACCATAACGCCTGGCGGCCGCAG
CACATCCATTTCTCGTTGTTCGGCAACGCGTATGCCACGCGGCTGGTCACGCAGATGTACTTCCCCGGCGATCCGCTGCT
GCCGTTCGATCCGATCTTCAACTGCGTGCCGGACGAGAAGGCACGCAATCGGTTGATCTCGACCTTCGACTGGGAAAACA
CCGCCCCCGAGTACGCGCTCGGCTACCGTTTCGATATCGTGCTGCGCGGCCGCGATGCCACGCCGATGGAGTAA

Upstream 100 bases:

>100_bases
AAAATCATTCAAATTGCGGAAAAACTCAATTTACATGACTTATGGCGTTGAATACAGTCGAGCCCATTCACTCACACAAC
ACAACCACGGAGACAGCACG

Downstream 100 bases:

>100_bases
GGCCATGCTGTACGCCACCGCATCCCAGACCGTTGGACCCTACCTGCATATCGGCCTGGCCGGCCTGAACTGCGCCGACC
TGACCGCCGACGCGCCCGAC

Product: Protocatechuate (dihdydroxy benzoate) 3,4-dioxygenase subunit beta

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MPPRSARPDQYRRPYWNTQPEYRFDPYASTQLRSPSQSLIALPQSLSEVTGPTFGPEFVREGDNDLTVGNGGEPIGERIL
VTGRVLDENGHPVPNALIEVWQANAAGRYVHKRDQHDAPLDPHFSGQGRTITDADGRYQFKTIKPGAYPWRNHHNAWRPQ
HIHFSLFGNAYATRLVTQMYFPGDPLLPFDPIFNCVPDEKARNRLISTFDWENTAPEYALGYRFDIVLRGRDATPME

Sequences:

>Translated_237_residues
MPPRSARPDQYRRPYWNTQPEYRFDPYASTQLRSPSQSLIALPQSLSEVTGPTFGPEFVREGDNDLTVGNGGEPIGERIL
VTGRVLDENGHPVPNALIEVWQANAAGRYVHKRDQHDAPLDPHFSGQGRTITDADGRYQFKTIKPGAYPWRNHHNAWRPQ
HIHFSLFGNAYATRLVTQMYFPGDPLLPFDPIFNCVPDEKARNRLISTFDWENTAPEYALGYRFDIVLRGRDATPME
>Mature_236_residues
PPRSARPDQYRRPYWNTQPEYRFDPYASTQLRSPSQSLIALPQSLSEVTGPTFGPEFVREGDNDLTVGNGGEPIGERILV
TGRVLDENGHPVPNALIEVWQANAAGRYVHKRDQHDAPLDPHFSGQGRTITDADGRYQFKTIKPGAYPWRNHHNAWRPQH
IHFSLFGNAYATRLVTQMYFPGDPLLPFDPIFNCVPDEKARNRLISTFDWENTAPEYALGYRFDIVLRGRDATPME

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012785 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 27048; Mature: 26917

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRSARPDQYRRPYWNTQPEYRFDPYASTQLRSPSQSLIALPQSLSEVTGPTFGPEFVR
CCCCCCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
EGDNDLTVGNGGEPIGERILVTGRVLDENGHPVPNALIEVWQANAAGRYVHKRDQHDAPL
CCCCCEEECCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCC
DPHFSGQGRTITDADGRYQFKTIKPGAYPWRNHHNAWRPQHIHFSLFGNAYATRLVTQMY
CCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHC
FPGDPLLPFDPIFNCVPDEKARNRLISTFDWENTAPEYALGYRFDIVLRGRDATPME
CCCCCCCCCCHHHCCCCCHHHHHHHEEECCCCCCCCCEEECEEEEEEEECCCCCCCC
>Mature Secondary Structure 
PPRSARPDQYRRPYWNTQPEYRFDPYASTQLRSPSQSLIALPQSLSEVTGPTFGPEFVR
CCCCCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
EGDNDLTVGNGGEPIGERILVTGRVLDENGHPVPNALIEVWQANAAGRYVHKRDQHDAPL
CCCCCEEECCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCC
DPHFSGQGRTITDADGRYQFKTIKPGAYPWRNHHNAWRPQHIHFSLFGNAYATRLVTQMY
CCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHC
FPGDPLLPFDPIFNCVPDEKARNRLISTFDWENTAPEYALGYRFDIVLRGRDATPME
CCCCCCCCCCHHHCCCCCHHHHHHHEEECCCCCCCCCEEECEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2808303 [H]