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The map label for this gene is ycgB [H]

Identifier: 94312834

GI number: 94312834

Start: 452652

End: 454190

Strand: Direct

Name: ycgB [H]

Synonym: Rmet_3906

Alternate gene names: 94312834

Gene position: 452652-454190 (Clockwise)

Preceding gene: 94312833

Following gene: 94312837

Centisome position: 17.54

GC content: 59.58

Gene sequence:

>1539_bases
ATGGCCTATCTATCGACGGGCTCGGAGTGGACTTTCGAGCTCATCCAGCGCTACGACCGCGAGATCGCCCGCATTGCCGG
AGATTTCGGCCTCGACACTTACCCGAACCAGATCGAAATCATCACCGCCGAGCAGATGCTGGATGCCTATGCATCGTCGG
GTCTGCCGGTCGGCTACAACCATTGGTCGTACGGCAAGCACTTCCTGGCCTCGGAACGCGGATATCAGCGCGGGTACATG
GGGCTGGCCTACGAAATCGTGATCAACTCCAATCCATGCATCGCGTACTTGATGGAGGAGAACACGATGCCGATGCAGGC
GCTGACCATCGCGCACGCCTGCTATGGCCATAATTCGTTCTTCAAGGGCAACTACCTGTTCCGCACCTGGACCAACGCGG
ACGCCATCATTGACTACCTGCTGTTCGCCAAGAACTACGTGGCGGAATGCGAGCAGCGTTATGGCGAGCAGGAAGTGGAG
TTGCTGCTGGATTCCTGCCACGCGCTGCAGAACTACGGCGTGGACCGCTACAAGCGGCCCAAGAAGCTGTCGATCACCGA
GGAGCAGGCCCGTCAGGCCGAACGCGAGAGCTATCTGCAGATGCAGGTCAATGACTTGTGGCGCACGCTGCCCAAGCATA
GGCCGCACGCGCTGCGGCAGGAAGAAGAGGCACTCGAGCTGGAAGCGATCTTCCCGCCGGAGCCGCAGGAGAACCTGCTT
TACTTCATCGAGAAGAACGCGCCAAAGCTGCAGCCGTGGCAGCGTGAAATTGTGCGCATCGTGCGCAAGATCGCGCAGTA
TTTCTATCCTCAGCGCCAGACCAAGGTCATGAACGAAGGCTGGGCCACGTTCTGGCACTACACCATCATCCATCAGCTCT
ATGAGGAAAAGCTCGTCAATGACGCGTTCATGCTCGAGCTGTTGCAGGCGCATACCAACGTCATCTATCAGCCGCCGTAT
CACAGCCAGTATTACAGCGGCCTGAACCCGTACACCCTGGGTTTCCTGATGTTCCAGGATATTCGTCGCATGTGCGAGAA
CCCGACCGAGGAAGACCGGCGCTGGGCGCCCGAGATCGCGGGCAGCGACTGGCGCCAGACGCTTGACTTCGCCATGCGTA
ACTTCAAGGACGAGAGCTTCCTGCTGCAGTTCCTGTCGCCGCGCGTGATCCGCGAACTCAAGCTGTTCTCGGTGCTTGAC
GACGACCGCGAAGGGAAGTTGCGCGTGACGGCCATCCATGACGACGAAGGCTATCGCGAGATTCGCCATCTGCTGGCCAA
TCAGTACGACCTGTCGAACATGGAGCCGAACATCCAGGTGACGAATGTGGATATCGGTGGAGACCGCTCGCTCACGCTGC
GTCACCTGCAGAACGACCGCAGGCCGCTGGCGCAGAATTTCGACGAGGTGGTGCGACACGTGACGCGGCTATGGGGCTTC
ACGGTGAGGCTCGAAGTGGCCTACGAGGATGGACGGCGTGAACTCAAGTACGAGTGCAAGCCTGAACGCCGCCATCAACC
CCAGCGTCGCGCTGCCTGA

Upstream 100 bases:

>100_bases
GACGAGATCTATCCCGTGTTGCACGACCTCTTTCAGAAGCGGGCCGCGTGGCCCGGCAGGTAGCTGCCCGGTAACGTCGC
CGGGAATACTGGGGAAGCCT

Downstream 100 bases:

>100_bases
AAGACGAAAGCGCCCGGAGGCTTAGTGCCTCCGGCGCGTATCGCGGGGCCGGGCCGTCGAGGACACCCCTGCGCGTTCCA
GATCCACACCCGGCAGCAGG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MAYLSTGSEWTFELIQRYDREIARIAGDFGLDTYPNQIEIITAEQMLDAYASSGLPVGYNHWSYGKHFLASERGYQRGYM
GLAYEIVINSNPCIAYLMEENTMPMQALTIAHACYGHNSFFKGNYLFRTWTNADAIIDYLLFAKNYVAECEQRYGEQEVE
LLLDSCHALQNYGVDRYKRPKKLSITEEQARQAERESYLQMQVNDLWRTLPKHRPHALRQEEEALELEAIFPPEPQENLL
YFIEKNAPKLQPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTIIHQLYEEKLVNDAFMLELLQAHTNVIYQPPY
HSQYYSGLNPYTLGFLMFQDIRRMCENPTEEDRRWAPEIAGSDWRQTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLD
DDREGKLRVTAIHDDEGYREIRHLLANQYDLSNMEPNIQVTNVDIGGDRSLTLRHLQNDRRPLAQNFDEVVRHVTRLWGF
TVRLEVAYEDGRRELKYECKPERRHQPQRRAA

Sequences:

>Translated_512_residues
MAYLSTGSEWTFELIQRYDREIARIAGDFGLDTYPNQIEIITAEQMLDAYASSGLPVGYNHWSYGKHFLASERGYQRGYM
GLAYEIVINSNPCIAYLMEENTMPMQALTIAHACYGHNSFFKGNYLFRTWTNADAIIDYLLFAKNYVAECEQRYGEQEVE
LLLDSCHALQNYGVDRYKRPKKLSITEEQARQAERESYLQMQVNDLWRTLPKHRPHALRQEEEALELEAIFPPEPQENLL
YFIEKNAPKLQPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTIIHQLYEEKLVNDAFMLELLQAHTNVIYQPPY
HSQYYSGLNPYTLGFLMFQDIRRMCENPTEEDRRWAPEIAGSDWRQTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLD
DDREGKLRVTAIHDDEGYREIRHLLANQYDLSNMEPNIQVTNVDIGGDRSLTLRHLQNDRRPLAQNFDEVVRHVTRLWGF
TVRLEVAYEDGRRELKYECKPERRHQPQRRAA
>Mature_511_residues
AYLSTGSEWTFELIQRYDREIARIAGDFGLDTYPNQIEIITAEQMLDAYASSGLPVGYNHWSYGKHFLASERGYQRGYMG
LAYEIVINSNPCIAYLMEENTMPMQALTIAHACYGHNSFFKGNYLFRTWTNADAIIDYLLFAKNYVAECEQRYGEQEVEL
LLDSCHALQNYGVDRYKRPKKLSITEEQARQAERESYLQMQVNDLWRTLPKHRPHALRQEEEALELEAIFPPEPQENLLY
FIEKNAPKLQPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTIIHQLYEEKLVNDAFMLELLQAHTNVIYQPPYH
SQYYSGLNPYTLGFLMFQDIRRMCENPTEEDRRWAPEIAGSDWRQTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLDD
DREGKLRVTAIHDDEGYREIRHLLANQYDLSNMEPNIQVTNVDIGGDRSLTLRHLQNDRRPLAQNFDEVVRHVTRLWGFT
VRLEVAYEDGRRELKYECKPERRHQPQRRAA

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=498, Percent_Identity=64.859437751004, Blast_Score=701, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60738; Mature: 60607

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYLSTGSEWTFELIQRYDREIARIAGDFGLDTYPNQIEIITAEQMLDAYASSGLPVGYN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCC
HWSYGKHFLASERGYQRGYMGLAYEIVINSNPCIAYLMEENTMPMQALTIAHACYGHNSF
CCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCE
FKGNYLFRTWTNADAIIDYLLFAKNYVAECEQRYGEQEVELLLDSCHALQNYGVDRYKRP
ECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHCCC
KKLSITEEQARQAERESYLQMQVNDLWRTLPKHRPHALRQEEEALELEAIFPPEPQENLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHCEEEEECCCCCCCCEE
YFIEKNAPKLQPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTIIHQLYEEKLVN
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DAFMLELLQAHTNVIYQPPYHSQYYSGLNPYTLGFLMFQDIRRMCENPTEEDRRWAPEIA
HHHHHHHHHHHCCEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
GSDWRQTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLDDDREGKLRVTAIHDDEGYRE
CCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHH
IRHLLANQYDLSNMEPNIQVTNVDIGGDRSLTLRHLQNDRRPLAQNFDEVVRHVTRLWGF
HHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCHHHHCHHHHHHHHHHHHCE
TVRLEVAYEDGRRELKYECKPERRHQPQRRAA
EEEEEEEEECCCCCCCCCCCCHHCCCCHHCCC
>Mature Secondary Structure 
AYLSTGSEWTFELIQRYDREIARIAGDFGLDTYPNQIEIITAEQMLDAYASSGLPVGYN
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCC
HWSYGKHFLASERGYQRGYMGLAYEIVINSNPCIAYLMEENTMPMQALTIAHACYGHNSF
CCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCE
FKGNYLFRTWTNADAIIDYLLFAKNYVAECEQRYGEQEVELLLDSCHALQNYGVDRYKRP
ECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHCCC
KKLSITEEQARQAERESYLQMQVNDLWRTLPKHRPHALRQEEEALELEAIFPPEPQENLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHCEEEEECCCCCCCCEE
YFIEKNAPKLQPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTIIHQLYEEKLVN
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DAFMLELLQAHTNVIYQPPYHSQYYSGLNPYTLGFLMFQDIRRMCENPTEEDRRWAPEIA
HHHHHHHHHHHCCEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
GSDWRQTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLDDDREGKLRVTAIHDDEGYRE
CCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHH
IRHLLANQYDLSNMEPNIQVTNVDIGGDRSLTLRHLQNDRRPLAQNFDEVVRHVTRLWGF
HHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCHHHHCHHHHHHHHHHHHCE
TVRLEVAYEDGRRELKYECKPERRHQPQRRAA
EEEEEEEEECCCCCCCCCCCCHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]