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The map label for this gene is yxeQ [H]

Identifier: 94312826

GI number: 94312826

Start: 442605

End: 443984

Strand: Reverse

Name: yxeQ [H]

Synonym: Rmet_3898

Alternate gene names: 94312826

Gene position: 443984-442605 (Counterclockwise)

Preceding gene: 94312827

Following gene: 94312825

Centisome position: 17.21

GC content: 68.33

Gene sequence:

>1380_bases
ATGTCCGACATCGATACCCGCTATCCGACCCGCCAGCTCTGCGAGTTTCTCGCGCGGTTCACGCTCGCCGATGTGCCGTC
GCCCGTCGTCGAGCGCACCAAGGATCTGTTCCTCGACTGGATCGCATCAGCCATCGCCGGCAAGGACGCGCCCGCCGTGC
GGCGCATCCAGGAGTTCGCCGCCGCGATGGGCCCGGCCACAGGCCAGGCCGAGGTCTTCGTCGACCGCCGTCGCACATCG
CCCTATTTCGCTGCGCTGATCAACGGCGCCTCGTCACACGTGGTCGAGCAGGATGACGTCCACAACGGCTCGGTGCTTCA
CCCCGCCGCAGTCGTGTTCCCGGCCGTTGTTGCCGCCGCGCAGGCGGAAGGCAAAACTGGCGCGGAAGTGCTGCTAGCCT
CGATCGCCGGCTACGAAGCAGGCATCCGCATCGGCGAGTTCATGGGCCGCTCGCACTACCGCGTGTTCCACACCACCGGC
ACCGTCGGCACGCTGGCCGCTGCTGCGGCAGTAGCCAAGCTGTACGGACTCGATGCCGAAGGTATCAACCAGGCACTGGG
TTCCGCCGGCACGCAGGCCGCCGGCCTGTGGGAATTCCTGCGCGACGCCGCGGATTCGAAGCAACTGCACACGGCCAAGG
CCGCCGCCGATGGCCTGCAGTCTGCCTGGCTGGCACGCGCGGGTTTCACCGGCGCGCGCCAGATCCTGGAAGGCGCGCAG
GGCATGGCAGCGGGGATGTCCAGCGACGCCAATCCGGCGGCGCTGACCGATGGCCTCGGCACGCGCTGGGCCACGGCGGA
AACCTCGTTCAAGTTCTTCGCGTCGTGCCGCCACACGCATCCGGCCGCGGACGCGCTGAAGGCGCTGATGCTGCGCGAAG
GACTGCAAGCCGACCAGATCGCCGCCGTCACGGCGCACGTCCATCAGGGCGCAATCGACGTGCTTGGCCCGGTGGTCAAC
CCGGCAACGATCCATCAGGCCAAGTTCTCGATGGGCACGGTGCTCGGCCTGGTCGCCGTGCACGCCCATGCGGGCCTGGG
CGAGTTCGAGCAGCATTCGTTGAAGGATGCGCAGGTCTCGGCGTTCCGCGACAAAGTTACGATGGAGCTCGACGAGGAGA
TCAACGCGGCCTATCCGCGCCAGTGGATCGGCCGCGTGACGGTGCGCACCACCGACGGCCGTACGCTCCAGGCGCGTGTC
GACGTGCCCAAGGGTGACCCCGACAACACGCTGTCGCGTCCCGAACTCGAGGCAAAGGCCATCCAGCTTGGCGCGTTCCG
TCACGGCGCGACCGAAGCCGAGATGCGCGCGATCATCGCGCGCGTCTGGCAGCTCGACCGCGAAGCCAACGTCAACGACT
GGCTGCCCGCCGCCCGCTGA

Upstream 100 bases:

>100_bases
AAACGCGCCTGTACCAGGTGGCGCCGATCTCGACCAACCTGATCCTGTCGTTCGTCGCCGAACACGTTCTCGAACTGCCC
CGCTCGTTCTGATACCTGCC

Downstream 100 bases:

>100_bases
TTACCACGAGAGCCTGCGAGATCGACATGACCACCCCTACCCTCGAACAACTGCGCGAGTGGATCGGCCGCACCGAATCC
CGCACCGAAACGCTCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MSDIDTRYPTRQLCEFLARFTLADVPSPVVERTKDLFLDWIASAIAGKDAPAVRRIQEFAAAMGPATGQAEVFVDRRRTS
PYFAALINGASSHVVEQDDVHNGSVLHPAAVVFPAVVAAAQAEGKTGAEVLLASIAGYEAGIRIGEFMGRSHYRVFHTTG
TVGTLAAAAAVAKLYGLDAEGINQALGSAGTQAAGLWEFLRDAADSKQLHTAKAAADGLQSAWLARAGFTGARQILEGAQ
GMAAGMSSDANPAALTDGLGTRWATAETSFKFFASCRHTHPAADALKALMLREGLQADQIAAVTAHVHQGAIDVLGPVVN
PATIHQAKFSMGTVLGLVAVHAHAGLGEFEQHSLKDAQVSAFRDKVTMELDEEINAAYPRQWIGRVTVRTTDGRTLQARV
DVPKGDPDNTLSRPELEAKAIQLGAFRHGATEAEMRAIIARVWQLDREANVNDWLPAAR

Sequences:

>Translated_459_residues
MSDIDTRYPTRQLCEFLARFTLADVPSPVVERTKDLFLDWIASAIAGKDAPAVRRIQEFAAAMGPATGQAEVFVDRRRTS
PYFAALINGASSHVVEQDDVHNGSVLHPAAVVFPAVVAAAQAEGKTGAEVLLASIAGYEAGIRIGEFMGRSHYRVFHTTG
TVGTLAAAAAVAKLYGLDAEGINQALGSAGTQAAGLWEFLRDAADSKQLHTAKAAADGLQSAWLARAGFTGARQILEGAQ
GMAAGMSSDANPAALTDGLGTRWATAETSFKFFASCRHTHPAADALKALMLREGLQADQIAAVTAHVHQGAIDVLGPVVN
PATIHQAKFSMGTVLGLVAVHAHAGLGEFEQHSLKDAQVSAFRDKVTMELDEEINAAYPRQWIGRVTVRTTDGRTLQARV
DVPKGDPDNTLSRPELEAKAIQLGAFRHGATEAEMRAIIARVWQLDREANVNDWLPAAR
>Mature_458_residues
SDIDTRYPTRQLCEFLARFTLADVPSPVVERTKDLFLDWIASAIAGKDAPAVRRIQEFAAAMGPATGQAEVFVDRRRTSP
YFAALINGASSHVVEQDDVHNGSVLHPAAVVFPAVVAAAQAEGKTGAEVLLASIAGYEAGIRIGEFMGRSHYRVFHTTGT
VGTLAAAAAVAKLYGLDAEGINQALGSAGTQAAGLWEFLRDAADSKQLHTAKAAADGLQSAWLARAGFTGARQILEGAQG
MAAGMSSDANPAALTDGLGTRWATAETSFKFFASCRHTHPAADALKALMLREGLQADQIAAVTAHVHQGAIDVLGPVVNP
ATIHQAKFSMGTVLGLVAVHAHAGLGEFEQHSLKDAQVSAFRDKVTMELDEEINAAYPRQWIGRVTVRTTDGRTLQARVD
VPKGDPDNTLSRPELEAKAIQLGAFRHGATEAEMRAIIARVWQLDREANVNDWLPAAR

Specific function: Unknown

COG id: COG2079

COG function: function code R; Uncharacterized protein involved in propionate catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prpD family [H]

Homologues:

Organism=Homo sapiens, GI310129732, Length=408, Percent_Identity=25.7352941176471, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI310110533, Length=408, Percent_Identity=25.7352941176471, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI310123058, Length=412, Percent_Identity=25.9708737864078, Blast_Score=105, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005656 [H]

Pfam domain/function: PF03972 MmgE_PrpD [H]

EC number: NA

Molecular weight: Translated: 48799; Mature: 48667

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIDTRYPTRQLCEFLARFTLADVPSPVVERTKDLFLDWIASAIAGKDAPAVRRIQEFA
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AAMGPATGQAEVFVDRRRTSPYFAALINGASSHVVEQDDVHNGSVLHPAAVVFPAVVAAA
HHHCCCCCCEEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
QAEGKTGAEVLLASIAGYEAGIRIGEFMGRSHYRVFHTTGTVGTLAAAAAVAKLYGLDAE
HCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHH
GINQALGSAGTQAAGLWEFLRDAADSKQLHTAKAAADGLQSAWLARAGFTGARQILEGAQ
HHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GMAAGMSSDANPAALTDGLGTRWATAETSFKFFASCRHTHPAADALKALMLREGLQADQI
HHHHCCCCCCCCCHHHCCCCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
AAVTAHVHQGAIDVLGPVVNPATIHQAKFSMGTVLGLVAVHAHAGLGEFEQHSLKDAQVS
HHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHH
AFRDKVTMELDEEINAAYPRQWIGRVTVRTTDGRTLQARVDVPKGDPDNTLSRPELEAKA
HHHHHHHHHHHHHHHHHCCHHHHCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHH
IQLGAFRHGATEAEMRAIIARVWQLDREANVNDWLPAAR
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDIDTRYPTRQLCEFLARFTLADVPSPVVERTKDLFLDWIASAIAGKDAPAVRRIQEFA
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AAMGPATGQAEVFVDRRRTSPYFAALINGASSHVVEQDDVHNGSVLHPAAVVFPAVVAAA
HHHCCCCCCEEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
QAEGKTGAEVLLASIAGYEAGIRIGEFMGRSHYRVFHTTGTVGTLAAAAAVAKLYGLDAE
HCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHH
GINQALGSAGTQAAGLWEFLRDAADSKQLHTAKAAADGLQSAWLARAGFTGARQILEGAQ
HHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GMAAGMSSDANPAALTDGLGTRWATAETSFKFFASCRHTHPAADALKALMLREGLQADQI
HHHHCCCCCCCCCHHHCCCCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
AAVTAHVHQGAIDVLGPVVNPATIHQAKFSMGTVLGLVAVHAHAGLGEFEQHSLKDAQVS
HHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHH
AFRDKVTMELDEEINAAYPRQWIGRVTVRTTDGRTLQARVDVPKGDPDNTLSRPELEAKA
HHHHHHHHHHHHHHHHHCCHHHHCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHH
IQLGAFRHGATEAEMRAIIARVWQLDREANVNDWLPAAR
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]