| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is yjgI [H]
Identifier: 94312802
GI number: 94312802
Start: 417439
End: 418209
Strand: Reverse
Name: yjgI [H]
Synonym: Rmet_3874
Alternate gene names: 94312802
Gene position: 418209-417439 (Counterclockwise)
Preceding gene: 94312805
Following gene: 94312801
Centisome position: 16.21
GC content: 67.19
Gene sequence:
>771_bases ATGAACTCCACCCCCACCCTCACCTCTGCCTCCGCCGCCCTCTCGAACAAGGTAGCTTTCGTCACCGGCGGATCGCGCGG CATCGGCGCCGCGGTAGTGCGGCGCCTGGCACGCGAAGGCGCCGCCGTGGCCTTCACCTACCAGAGCTCCGGCGCGGTTG CGCAAGCGCTGGCTGAATCGATCCAGGCCGCAGGCGGCCGTGCCCGTGCCTATCACGCCGACGCGGCCGATGCCGCGGCC GTCACACGTGCGATCGACGCGGCCGCCGCTGACTTCGGCAAGATCGACATCCTCGTGAACAACGCCGGCGTGCTATTCCT CGGTCCGGTCGACACGTTCCCGCTGGAAGACTTCGACAAGACGCTGGCCGTGAATGTACGCGCGGTATTTGTCGCCGCGA AGGCAGCGCTGGCGCACATGGGCCAGGGTGGCCGCATCATCAACATCGGCAGCACCAATGCGGACCGGATGCCGTTCCCG GGCGGCGCCGCCTACGCGATGAGCAAGTCCGCCCTGAAAGGGCTGGTGCAAGGCATGGCACGCGACCTGGGACCGAAGGG CATCACGGTCAATAACGTGCAGCCTGGCCCGGTCAACACCGACATGAACCCCGAGGACAGCGAATTCGCCGCATCGCTGC ACGGCCTGATGGCGCTGCAACGTCATGCCCACCCCGACGAGATCGCCAGCATGGTGGCGTATCTGGCCGGCCCTGAGGCT GGATTCGTGACGGGTGCCAGCCTCAACGTGGATGGCGGATTCGCGGCTTGA
Upstream 100 bases:
>100_bases ATATCAACGGTTGAAAAAGTTGATACGGAATCATGACTACCGGTTGCAGATCGCCAAAACCATACTGCTTTCACCGTCCC AACCACACAGGAACACGATC
Downstream 100 bases:
>100_bases TTCCGCACGGAAACGCCGCGTCTTGATGCGCGGCGGCCGGATGACACAACTTGCGCGCGCCGGTGACGCGCCCCGATGTC GGGCGCGTGGCCGGCGCGCG
Product: short chain dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MNSTPTLTSASAALSNKVAFVTGGSRGIGAAVVRRLAREGAAVAFTYQSSGAVAQALAESIQAAGGRARAYHADAADAAA VTRAIDAAAADFGKIDILVNNAGVLFLGPVDTFPLEDFDKTLAVNVRAVFVAAKAALAHMGQGGRIINIGSTNADRMPFP GGAAYAMSKSALKGLVQGMARDLGPKGITVNNVQPGPVNTDMNPEDSEFAASLHGLMALQRHAHPDEIASMVAYLAGPEA GFVTGASLNVDGGFAA
Sequences:
>Translated_256_residues MNSTPTLTSASAALSNKVAFVTGGSRGIGAAVVRRLAREGAAVAFTYQSSGAVAQALAESIQAAGGRARAYHADAADAAA VTRAIDAAAADFGKIDILVNNAGVLFLGPVDTFPLEDFDKTLAVNVRAVFVAAKAALAHMGQGGRIINIGSTNADRMPFP GGAAYAMSKSALKGLVQGMARDLGPKGITVNNVQPGPVNTDMNPEDSEFAASLHGLMALQRHAHPDEIASMVAYLAGPEA GFVTGASLNVDGGFAA >Mature_256_residues MNSTPTLTSASAALSNKVAFVTGGSRGIGAAVVRRLAREGAAVAFTYQSSGAVAQALAESIQAAGGRARAYHADAADAAA VTRAIDAAAADFGKIDILVNNAGVLFLGPVDTFPLEDFDKTLAVNVRAVFVAAKAALAHMGQGGRIINIGSTNADRMPFP GGAAYAMSKSALKGLVQGMARDLGPKGITVNNVQPGPVNTDMNPEDSEFAASLHGLMALQRHAHPDEIASMVAYLAGPEA GFVTGASLNVDGGFAA
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=35.9183673469388, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI126723750, Length=249, Percent_Identity=31.7269076305221, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=33.6, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=33.4630350194552, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI5031737, Length=244, Percent_Identity=31.9672131147541, Blast_Score=101, Evalue=7e-22, Organism=Homo sapiens, GI19923817, Length=253, Percent_Identity=29.2490118577075, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=33.6065573770492, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI7705925, Length=250, Percent_Identity=31.2, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI40254986, Length=192, Percent_Identity=32.2916666666667, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=37.7049180327869, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI66933014, Length=187, Percent_Identity=31.0160427807487, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI4758504, Length=265, Percent_Identity=31.6981132075472, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=34.375, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI31542939, Length=228, Percent_Identity=31.140350877193, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI83715985, Length=261, Percent_Identity=30.6513409961686, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI7706318, Length=195, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI109715829, Length=243, Percent_Identity=27.1604938271605, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI4502601, Length=239, Percent_Identity=27.6150627615063, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI223718074, Length=195, Percent_Identity=29.2307692307692, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4504505, Length=234, Percent_Identity=29.4871794871795, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4503817, Length=203, Percent_Identity=23.6453201970443, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI224922801, Length=180, Percent_Identity=31.6666666666667, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=47.9508196721311, Blast_Score=215, Evalue=2e-57, Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=35.8565737051793, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=35.1239669421488, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1787335, Length=242, Percent_Identity=37.603305785124, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=34.6938775510204, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=32.2709163346614, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=31.2252964426877, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=31.8548387096774, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1786812, Length=258, Percent_Identity=31.0077519379845, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1787905, Length=254, Percent_Identity=33.0708661417323, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1789057, Length=263, Percent_Identity=31.9391634980989, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI87082160, Length=256, Percent_Identity=31.25, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787820, Length=228, Percent_Identity=26.3157894736842, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1788891, Length=200, Percent_Identity=33.5, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787545, Length=256, Percent_Identity=25.390625, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=34.8178137651822, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=31.2741312741313, Blast_Score=117, Evalue=6e-27, Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=31.5789473684211, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17560676, Length=258, Percent_Identity=31.7829457364341, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17561402, Length=259, Percent_Identity=32.4324324324324, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=33.587786259542, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=35.4716981132075, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562906, Length=258, Percent_Identity=29.8449612403101, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=32.7067669172932, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=31.7829457364341, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=32.3308270676692, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=31.0077519379845, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17565030, Length=268, Percent_Identity=32.8358208955224, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562908, Length=258, Percent_Identity=30.2325581395349, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562904, Length=259, Percent_Identity=31.2741312741313, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=30.8300395256917, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI71982365, Length=188, Percent_Identity=29.7872340425532, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=30.6772908366534, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=30.188679245283, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=27.6119402985075, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=29.1187739463602, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=29.5019157088123, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17558628, Length=189, Percent_Identity=32.2751322751323, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17555706, Length=249, Percent_Identity=29.718875502008, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=27.0916334661355, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17538480, Length=260, Percent_Identity=28.4615384615385, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI72000259, Length=256, Percent_Identity=28.125, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17536651, Length=250, Percent_Identity=26, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17551412, Length=270, Percent_Identity=28.1481481481481, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17568967, Length=194, Percent_Identity=34.020618556701, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17508651, Length=253, Percent_Identity=28.4584980237154, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17538182, Length=257, Percent_Identity=31.5175097276265, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI193203117, Length=193, Percent_Identity=29.0155440414508, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI86565303, Length=261, Percent_Identity=28.3524904214559, Blast_Score=67, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=251, Percent_Identity=29.0836653386454, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=193, Percent_Identity=27.979274611399, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=37.6, Blast_Score=139, Evalue=1e-33, Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=36.8627450980392, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=35.8565737051793, Blast_Score=129, Evalue=1e-30, Organism=Drosophila melanogaster, GI24644339, Length=245, Percent_Identity=33.8775510204082, Blast_Score=127, Evalue=6e-30, Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=31.8367346938775, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=32.4, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=32.4, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24644337, Length=169, Percent_Identity=38.4615384615385, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI21357673, Length=192, Percent_Identity=31.7708333333333, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI116007236, Length=203, Percent_Identity=32.512315270936, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI116007234, Length=239, Percent_Identity=31.3807531380753, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI17737361, Length=261, Percent_Identity=30.2681992337165, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI116007238, Length=222, Percent_Identity=30.6306306306306, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI28571387, Length=253, Percent_Identity=28.8537549407115, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI116007232, Length=180, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641232, Length=234, Percent_Identity=28.6324786324786, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24584752, Length=189, Percent_Identity=30.6878306878307, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648944, Length=211, Percent_Identity=28.9099526066351, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355631, Length=172, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 25851; Mature: 25851
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTPTLTSASAALSNKVAFVTGGSRGIGAAVVRRLAREGAAVAFTYQSSGAVAQALAES CCCCCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH IQAAGGRARAYHADAADAAAVTRAIDAAAADFGKIDILVNNAGVLFLGPVDTFPLEDFDK HHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCCCCCCCCCH TLAVNVRAVFVAAKAALAHMGQGGRIINIGSTNADRMPFPGGAAYAMSKSALKGLVQGMA HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RDLGPKGITVNNVQPGPVNTDMNPEDSEFAASLHGLMALQRHAHPDEIASMVAYLAGPEA HHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC GFVTGASLNVDGGFAA CEEECCEEECCCCCCC >Mature Secondary Structure MNSTPTLTSASAALSNKVAFVTGGSRGIGAAVVRRLAREGAAVAFTYQSSGAVAQALAES CCCCCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH IQAAGGRARAYHADAADAAAVTRAIDAAAADFGKIDILVNNAGVLFLGPVDTFPLEDFDK HHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCCCCCCCCCH TLAVNVRAVFVAAKAALAHMGQGGRIINIGSTNADRMPFPGGAAYAMSKSALKGLVQGMA HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RDLGPKGITVNNVQPGPVNTDMNPEDSEFAASLHGLMALQRHAHPDEIASMVAYLAGPEA HHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC GFVTGASLNVDGGFAA CEEECCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]