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The map label for this gene is lipB [H]

Identifier: 94312725

GI number: 94312725

Start: 333825

End: 334880

Strand: Reverse

Name: lipB [H]

Synonym: Rmet_3795

Alternate gene names: 94312725

Gene position: 334880-333825 (Counterclockwise)

Preceding gene: 94312726

Following gene: 94312724

Centisome position: 12.98

GC content: 66.38

Gene sequence:

>1056_bases
ATGATCAGCTCTGAGCGAAGGCCAGGGGTCACCCTGGTCCTGGTAGTAGCCGGGCTCGTGGGTGCCGCCGTCTATTGGGC
AACGGCACCCACGGAACCGGCGCAAGGTCCACTGCCGGCGCGGTCCCGCACGGACGCAAGGCCGGAGCTATCGGCATCAC
CCACTGACAGCATGCGCGCGCGAAACATCACCGAGATGCCGTCGTTGGCGGGCGTCGATATTCCACCCGGCCCGGAAGCC
GACGCGCAAGGCAATCTGCGCCTGACGCGCGCGCTGCGCACCTACTTCGACTACTTCCTGAGCGCCAGCCATGATGCGGG
TGACGCCGCGGCATTGGACCAGTTGGTGCGCGACGACATCCGCAAACATGTGCCGCAACCGGCCGAGGACCAGGCGTGGC
GACTGTGGCAACGCTACCGGGCATACCTGTCCGAGATGCAGCCCAAAGCCACCGATGGACCGATGACCAGTGTGATTGGC
GCGCCGGACACCAGTCAGGTGCAACGCCTGCGCGCATTGATAGCCGACCGCAACGCCGCGCGAGCGCGCCACTTGCCAGA
CGTCGCGGCCATCTGGTTCGACGACGAGCAAACCTACGACGACGCCATGCTCGCGCGCCTGGAGATAGCCACCCAGCCTG
GACTCGACGACGCCGAACGACAGCGCCGCCTGTCCACACTGGACGCCACGCTGCCCGAATCCGTGCGTGCCGCGCGCGAA
GCCGAAGCAAGGCCGCAGGCGATTAGCAAGACGATCGCCAGTATGCAGACGGCAGGACGTAGCCCTCAGGATATCGGTGC
ATCCCTGGCTCAGGCATACGGTCCCGAGGTCGCCCAGCGCTATCAGCAGCAGGCGCAGGCCGAGCAGGCCTGGAAGCAGC
GCTACGACGATTACGCAGCCCAGCGCTCGCAGATCGTGTCGTTCGCCGGTTTGTCGGAACAGGACCGCGCGCAGCAGCTT
GAGACGCTGCGGCGGCAAACATTCACCAATCCAAGTGAAGCGTTGCAGGCCGAGGTGATGGACAAGGCCGTGGGGGGGCG
ACGGGCGGCGCAGTGA

Upstream 100 bases:

>100_bases
TACTACTGGAACCATCTCGACGAGATCAATCAGATGCTCGGTATGTATCAGGACGTCGACCCACGCACGGTGATCCTGAA
TCACGCCAACCGCTTGCGCA

Downstream 100 bases:

>100_bases
GAGCGGTGCTATCTCCTGCAAGGTGCCTTCTCATGTCAGCCTGCTTCGGCACGGCGAATCGCGATCTCTCGGAGTCGTGC
GCCCGCCCCACGCAGGCGTA

Product: lipase chaperone

Products: NA

Alternate protein names: Lipase activator protein; Lipase foldase; Lipase helper protein; Lipase modulator [H]

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MISSERRPGVTLVLVVAGLVGAAVYWATAPTEPAQGPLPARSRTDARPELSASPTDSMRARNITEMPSLAGVDIPPGPEA
DAQGNLRLTRALRTYFDYFLSASHDAGDAAALDQLVRDDIRKHVPQPAEDQAWRLWQRYRAYLSEMQPKATDGPMTSVIG
APDTSQVQRLRALIADRNAARARHLPDVAAIWFDDEQTYDDAMLARLEIATQPGLDDAERQRRLSTLDATLPESVRAARE
AEARPQAISKTIASMQTAGRSPQDIGASLAQAYGPEVAQRYQQQAQAEQAWKQRYDDYAAQRSQIVSFAGLSEQDRAQQL
ETLRRQTFTNPSEALQAEVMDKAVGGRRAAQ

Sequences:

>Translated_351_residues
MISSERRPGVTLVLVVAGLVGAAVYWATAPTEPAQGPLPARSRTDARPELSASPTDSMRARNITEMPSLAGVDIPPGPEA
DAQGNLRLTRALRTYFDYFLSASHDAGDAAALDQLVRDDIRKHVPQPAEDQAWRLWQRYRAYLSEMQPKATDGPMTSVIG
APDTSQVQRLRALIADRNAARARHLPDVAAIWFDDEQTYDDAMLARLEIATQPGLDDAERQRRLSTLDATLPESVRAARE
AEARPQAISKTIASMQTAGRSPQDIGASLAQAYGPEVAQRYQQQAQAEQAWKQRYDDYAAQRSQIVSFAGLSEQDRAQQL
ETLRRQTFTNPSEALQAEVMDKAVGGRRAAQ
>Mature_351_residues
MISSERRPGVTLVLVVAGLVGAAVYWATAPTEPAQGPLPARSRTDARPELSASPTDSMRARNITEMPSLAGVDIPPGPEA
DAQGNLRLTRALRTYFDYFLSASHDAGDAAALDQLVRDDIRKHVPQPAEDQAWRLWQRYRAYLSEMQPKATDGPMTSVIG
APDTSQVQRLRALIADRNAARARHLPDVAAIWFDDEQTYDDAMLARLEIATQPGLDDAERQRRLSTLDATLPESVRAARE
AEARPQAISKTIASMQTAGRSPQDIGASLAQAYGPEVAQRYQQQAQAEQAWKQRYDDYAAQRSQIVSFAGLSEQDRAQQL
ETLRRQTFTNPSEALQAEVMDKAVGGRRAAQ

Specific function: May be involved in the folding of the extracellular lipase during its passage through the periplasm [H]

COG id: COG5380

COG function: function code O; Lipase chaperone

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lipase chaperone family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004961 [H]

Pfam domain/function: PF03280 Lipase_chap [H]

EC number: NA

Molecular weight: Translated: 38577; Mature: 38577

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSERRPGVTLVLVVAGLVGAAVYWATAPTEPAQGPLPARSRTDARPELSASPTDSMRA
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RNITEMPSLAGVDIPPGPEADAQGNLRLTRALRTYFDYFLSASHDAGDAAALDQLVRDDI
CCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RKHVPQPAEDQAWRLWQRYRAYLSEMQPKATDGPMTSVIGAPDTSQVQRLRALIADRNAA
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCHHH
RARHLPDVAAIWFDDEQTYDDAMLARLEIATQPGLDDAERQRRLSTLDATLPESVRAARE
HHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHH
AEARPQAISKTIASMQTAGRSPQDIGASLAQAYGPEVAQRYQQQAQAEQAWKQRYDDYAA
HHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QRSQIVSFAGLSEQDRAQQLETLRRQTFTNPSEALQAEVMDKAVGGRRAAQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MISSERRPGVTLVLVVAGLVGAAVYWATAPTEPAQGPLPARSRTDARPELSASPTDSMRA
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RNITEMPSLAGVDIPPGPEADAQGNLRLTRALRTYFDYFLSASHDAGDAAALDQLVRDDI
CCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RKHVPQPAEDQAWRLWQRYRAYLSEMQPKATDGPMTSVIGAPDTSQVQRLRALIADRNAA
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCHHH
RARHLPDVAAIWFDDEQTYDDAMLARLEIATQPGLDDAERQRRLSTLDATLPESVRAARE
HHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHH
AEARPQAISKTIASMQTAGRSPQDIGASLAQAYGPEVAQRYQQQAQAEQAWKQRYDDYAA
HHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QRSQIVSFAGLSEQDRAQQLETLRRQTFTNPSEALQAEVMDKAVGGRRAAQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1987151 [H]