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The map label for this gene is yjgH [H]

Identifier: 94312687

GI number: 94312687

Start: 297688

End: 298311

Strand: Reverse

Name: yjgH [H]

Synonym: Rmet_3756

Alternate gene names: 94312687

Gene position: 298311-297688 (Counterclockwise)

Preceding gene: 291481488

Following gene: 94312679

Centisome position: 11.56

GC content: 58.97

Gene sequence:

>624_bases
ATGGTCGTGCGTGAGATGCGGCTGGAGTTAGGCGTAACAAGCCCACACTGGGCCTTGAAAACGCCAGCGATCACAGTGCA
TTGCATCGAGCGACGCGGTGAGGACGGCTTTGGCGAAGGCAATTTCAAGGCGCTGTTCGAATCCTGGGAGCAGGGTCAGG
TTCGGCGCGGCCCGCTCACCGGTTCCCACATCTTCAAGGTACACATCATGCAATCCAAGACGACAATCACCCTTGCGGAT
CCGCACCCCGTTCTCGGCAGCACCCAAGTTTTCAAGACTTTCAACTACGCGCCGGCTGTTGCGGCAGGTGGCCTGCTATT
CATCGCTGGCCAAATTGGCATTCGCGCAGACGGGACCGTGCCCGAGACTGTGGAGGAGCAGATCGATCTCGCGTTCCAGA
GGCTGCGCGCGATTCTGCAGGCGGCTGGCCTTGGATTTGAGGATCTGGTTGAGCTGGTCAGCTATCACGTAGATGTCGAC
AAGCAACTCACGGCGTTCCGTGAGATCAAGGACCGATACATCAAAGCGGATGCACCGGTCTGGACGATACTGGGCGTGGC
CGCGTTGGCCAGGCCGACGCTATTCGTCGAAATCAAGGCTGTTGCTGCAACGCGCGCCGTGTAA

Upstream 100 bases:

>100_bases
ATCACATACCAACAGGCGCAGCTTGTCGCGCGCTAACATTCAACGCTGACGGCACACGCCCACCCTCGAGCCCGAGGCAC
TTGATTCACACGGCATCCCC

Downstream 100 bases:

>100_bases
TTGGTCAATCGGGGAACGCTGCGGATTCAACCAGTCGACTGCACACTCCGTGGAGGCGACGAATGACGCCATCCTCCCCT
CCGTCAGTGCAGCGTGTAGA

Product: putative mRNA endoribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MVVREMRLELGVTSPHWALKTPAITVHCIERRGEDGFGEGNFKALFESWEQGQVRRGPLTGSHIFKVHIMQSKTTITLAD
PHPVLGSTQVFKTFNYAPAVAAGGLLFIAGQIGIRADGTVPETVEEQIDLAFQRLRAILQAAGLGFEDLVELVSYHVDVD
KQLTAFREIKDRYIKADAPVWTILGVAALARPTLFVEIKAVAATRAV

Sequences:

>Translated_207_residues
MVVREMRLELGVTSPHWALKTPAITVHCIERRGEDGFGEGNFKALFESWEQGQVRRGPLTGSHIFKVHIMQSKTTITLAD
PHPVLGSTQVFKTFNYAPAVAAGGLLFIAGQIGIRADGTVPETVEEQIDLAFQRLRAILQAAGLGFEDLVELVSYHVDVD
KQLTAFREIKDRYIKADAPVWTILGVAALARPTLFVEIKAVAATRAV
>Mature_207_residues
MVVREMRLELGVTSPHWALKTPAITVHCIERRGEDGFGEGNFKALFESWEQGQVRRGPLTGSHIFKVHIMQSKTTITLAD
PHPVLGSTQVFKTFNYAPAVAAGGLLFIAGQIGIRADGTVPETVEEQIDLAFQRLRAILQAAGLGFEDLVELVSYHVDVD
KQLTAFREIKDRYIKADAPVWTILGVAALARPTLFVEIKAVAATRAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=118, Percent_Identity=36.4406779661017, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 22720; Mature: 22720

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVREMRLELGVTSPHWALKTPAITVHCIERRGEDGFGEGNFKALFESWEQGQVRRGPLT
CCHHHHHHHHCCCCCCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEECCCCC
GSHIFKVHIMQSKTTITLADPHPVLGSTQVFKTFNYAPAVAAGGLLFIAGQIGIRADGTV
CCEEEEEEEEECCEEEEECCCCCCCCCHHHHHHCCCCCHHHHCCEEEEEECCCEEECCCC
PETVEEQIDLAFQRLRAILQAAGLGFEDLVELVSYHVDVDKQLTAFREIKDRYIKADAPV
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH
WTILGVAALARPTLFVEIKAVAATRAV
HHHHHHHHHHCCEEEEEEEEHHHHCCC
>Mature Secondary Structure
MVVREMRLELGVTSPHWALKTPAITVHCIERRGEDGFGEGNFKALFESWEQGQVRRGPLT
CCHHHHHHHHCCCCCCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEECCCCC
GSHIFKVHIMQSKTTITLADPHPVLGSTQVFKTFNYAPAVAAGGLLFIAGQIGIRADGTV
CCEEEEEEEEECCEEEEECCCCCCCCCHHHHHHCCCCCHHHHCCEEEEEECCCEEECCCC
PETVEEQIDLAFQRLRAILQAAGLGFEDLVELVSYHVDVDKQLTAFREIKDRYIKADAPV
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH
WTILGVAALARPTLFVEIKAVAATRAV
HHHHHHHHHHCCEEEEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]