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The map label for this gene is yegE [C]

Identifier: 94312677

GI number: 94312677

Start: 288812

End: 289990

Strand: Reverse

Name: yegE [C]

Synonym: Rmet_3745

Alternate gene names: 94312677

Gene position: 289990-288812 (Counterclockwise)

Preceding gene: 94312678

Following gene: 94312665

Centisome position: 11.24

GC content: 56.74

Gene sequence:

>1179_bases
ATGTCCCCAACCCACAAGCCGATGCCAGAACCTACCGAGGTCTTCACGCTGCCGCGCTGGAAGATAACAAGATGGCTAAC
GGACACAGACAGAGACGTCCCTACTGACATCAAGCGTGCGCTTATCGGAAGCTTGTTCGGGACTTTATCCATCTTCGTTG
GCGGGGTCGTCAATACGCTGTTAGTCGCTGCGTTAATAGCCTGGCATATCCAACGCCCGGCATTCTTTGCATGGTTCGGA
TTGGAGTGCCTGATTTGCATCGCTCGAATCAGCATCTTGGTTTCGGCGCGGCGACGAGCACGTGCTGCACGGTCGACCCA
TACCGACTTGCACCTGGCGCTTAGTCTGGCTTGGGCCTTTAGCGTAGGATTGGGAACCTACTTGAGCATTACAAGCGGAA
ACTGGCTTGCTGCCGCCCTAGCATGCCTTTCGTCCGCTGCAATGATTGGTGGCATTTGCTTTCGGAACTTCGGGGCACCC
AGGATGAGCGGGCTAATGATTCTGCTGGCCCTGGGTCCATGCTGCCTTGGTGCAATCGTCGCACGTGAGCCGCTGTTCCT
TCTGACACTGATTCAGTTGCCCGTCTACGTGGCCAGCATGACGAGTGCATCCTTTCGCATGCATGCGATGCTGGTTGCGA
CAATGCAGTCGGAGCGCGAGAACGCACACCGCGCTCGCCACGATTCAATGACTGGACTTCTGAATCGAGGCAGTTTGCTG
GCTGAAATCAGGGCGACAATGGAGTGCAATGCCATTTCCCCACTGCGCTCTGCGCTCCTCTATCTGGACCTGGACGGCTT
CAAACGCATCAATGACGTACATGGTCACGGCTGCGGAGACGAACTGCTCCAGCAAGTGGCGGACCGAATGCGAGCGACGG
TGCCCGAAGGCACTCACGTCTCTCGCATTGGAGGAGATGAGTTTGTCATCCTGCTGAACCTCCATGAGAGTGATGACGTG
CAAGTGCTCGCGCAACGGCTGCTACGAGACATAGCTGTACCGTATCTGCTGGCCAATGGAGAGACGGTGGCGATTGGCGT
AAGCATCGGCATTACCCATATCTCTCCCAACGGACAAAGCGCCGATGCAGTCCTTAATGTCGCCGACCGCGCACTATATG
TCGCAAAGGCGCGCGGCAAGGGATGCTTCCATTTTTCGGAGGCGGTCCAGGCGCTCTAG

Upstream 100 bases:

>100_bases
TGGCTGTCTGGTGCGCATCGCGCTACGAGGTCAAAACCTGGCTCGGCGAGTCGGACAGTGCAAGGCGAACAGGTAGCCGT
CTGGCACAATATCAAATCAT

Downstream 100 bases:

>100_bases
GCGCCCTAGTCGGTCATCGGACACAACGCTGCTTGTTGGTTGTTCGTATGAAGTCGCGACATTCCCGCTAGCCTCAACCA
AGTCGATGGTCTCAGCCAGC

Product: putative GGDEF/cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MSPTHKPMPEPTEVFTLPRWKITRWLTDTDRDVPTDIKRALIGSLFGTLSIFVGGVVNTLLVAALIAWHIQRPAFFAWFG
LECLICIARISILVSARRRARAARSTHTDLHLALSLAWAFSVGLGTYLSITSGNWLAAALACLSSAAMIGGICFRNFGAP
RMSGLMILLALGPCCLGAIVAREPLFLLTLIQLPVYVASMTSASFRMHAMLVATMQSERENAHRARHDSMTGLLNRGSLL
AEIRATMECNAISPLRSALLYLDLDGFKRINDVHGHGCGDELLQQVADRMRATVPEGTHVSRIGGDEFVILLNLHESDDV
QVLAQRLLRDIAVPYLLANGETVAIGVSIGITHISPNGQSADAVLNVADRALYVAKARGKGCFHFSEAVQAL

Sequences:

>Translated_392_residues
MSPTHKPMPEPTEVFTLPRWKITRWLTDTDRDVPTDIKRALIGSLFGTLSIFVGGVVNTLLVAALIAWHIQRPAFFAWFG
LECLICIARISILVSARRRARAARSTHTDLHLALSLAWAFSVGLGTYLSITSGNWLAAALACLSSAAMIGGICFRNFGAP
RMSGLMILLALGPCCLGAIVAREPLFLLTLIQLPVYVASMTSASFRMHAMLVATMQSERENAHRARHDSMTGLLNRGSLL
AEIRATMECNAISPLRSALLYLDLDGFKRINDVHGHGCGDELLQQVADRMRATVPEGTHVSRIGGDEFVILLNLHESDDV
QVLAQRLLRDIAVPYLLANGETVAIGVSIGITHISPNGQSADAVLNVADRALYVAKARGKGCFHFSEAVQAL
>Mature_391_residues
SPTHKPMPEPTEVFTLPRWKITRWLTDTDRDVPTDIKRALIGSLFGTLSIFVGGVVNTLLVAALIAWHIQRPAFFAWFGL
ECLICIARISILVSARRRARAARSTHTDLHLALSLAWAFSVGLGTYLSITSGNWLAAALACLSSAAMIGGICFRNFGAPR
MSGLMILLALGPCCLGAIVAREPLFLLTLIQLPVYVASMTSASFRMHAMLVATMQSERENAHRARHDSMTGLLNRGSLLA
EIRATMECNAISPLRSALLYLDLDGFKRINDVHGHGCGDELLQQVADRMRATVPEGTHVSRIGGDEFVILLNLHESDDVQ
VLAQRLLRDIAVPYLLANGETVAIGVSIGITHISPNGQSADAVLNVADRALYVAKARGKGCFHFSEAVQAL

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1788381, Length=173, Percent_Identity=33.5260115606936, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI87081977, Length=153, Percent_Identity=32.6797385620915, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI145693134, Length=164, Percent_Identity=36.5853658536585, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787541, Length=159, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788956, Length=153, Percent_Identity=35.2941176470588, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI87081881, Length=165, Percent_Identity=37.5757575757576, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787262, Length=175, Percent_Identity=26.2857142857143, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1786584, Length=264, Percent_Identity=25, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87082007, Length=160, Percent_Identity=30, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788085, Length=183, Percent_Identity=22.4043715846995, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787816, Length=271, Percent_Identity=25.0922509225092, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 42531; Mature: 42400

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTHKPMPEPTEVFTLPRWKITRWLTDTDRDVPTDIKRALIGSLFGTLSIFVGGVVNTL
CCCCCCCCCCCCCEEECCCHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAALIAWHIQRPAFFAWFGLECLICIARISILVSARRRARAARSTHTDLHLALSLAWAF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SVGLGTYLSITSGNWLAAALACLSSAAMIGGICFRNFGAPRMSGLMILLALGPCCLGAIV
HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
AREPLFLLTLIQLPVYVASMTSASFRMHAMLVATMQSERENAHRARHDSMTGLLNRGSLL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AEIRATMECNAISPLRSALLYLDLDGFKRINDVHGHGCGDELLQQVADRMRATVPEGTHV
HHHHHHHCCCCHHHHHHHHEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEE
SRIGGDEFVILLNLHESDDVQVLAQRLLRDIAVPYLLANGETVAIGVSIGITHISPNGQS
EECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCEEEECCCEEEEEEEEEEEEECCCCCC
ADAVLNVADRALYVAKARGKGCFHFSEAVQAL
HHHHHHHHHHHEEEEECCCCCCEEHHHHHHCC
>Mature Secondary Structure 
SPTHKPMPEPTEVFTLPRWKITRWLTDTDRDVPTDIKRALIGSLFGTLSIFVGGVVNTL
CCCCCCCCCCCCEEECCCHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAALIAWHIQRPAFFAWFGLECLICIARISILVSARRRARAARSTHTDLHLALSLAWAF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SVGLGTYLSITSGNWLAAALACLSSAAMIGGICFRNFGAPRMSGLMILLALGPCCLGAIV
HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
AREPLFLLTLIQLPVYVASMTSASFRMHAMLVATMQSERENAHRARHDSMTGLLNRGSLL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AEIRATMECNAISPLRSALLYLDLDGFKRINDVHGHGCGDELLQQVADRMRATVPEGTHV
HHHHHHHCCCCHHHHHHHHEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEE
SRIGGDEFVILLNLHESDDVQVLAQRLLRDIAVPYLLANGETVAIGVSIGITHISPNGQS
EECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCEEEECCCEEEEEEEEEEEEECCCCCC
ADAVLNVADRALYVAKARGKGCFHFSEAVQAL
HHHHHHHHHHHEEEEECCCCCCEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]