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The map label for this gene is tse [H]

Identifier: 94312655

GI number: 94312655

Start: 263355

End: 265241

Strand: Reverse

Name: tse [H]

Synonym: Rmet_3723

Alternate gene names: 94312655

Gene position: 265241-263355 (Counterclockwise)

Preceding gene: 94312658

Following gene: 94312653

Centisome position: 10.28

GC content: 64.49

Gene sequence:

>1887_bases
ATGCGCCTGCTTCGCGGTATGACAATTCAACGCAAGCTCATCCTGAGCACAATCACCTGCCTCCTGCTCGTTGTGACAAT
GACCGCGATGCTCATCCTGTGGCAGATCAGCAAGGGGCTGCAGGAGCGCGTGGTCGATCTGGAATTGCCGGCGATCGTCG
GCGAGATTCGCAATGACATGCTGCATCAGATCGCACGCCCGTTGGCCGCCGCGCAGGCAATGGCCGGCAACACGATGCTG
CGTGACTGGGAGAGCAACGGACTCGCGGACGACTACGTGCCGACGTGGCGTCGCTACGCTGCGGAGATCAAGTCACGCAA
TCAGGCGGACGCGGTCTTCTGGGTATCGGCCAGCCAGGGCAAGTACCTCACGGAGAAAGGCGTGGACCGCACCGTGCAGG
CGGATTCCGCCGGGGACAAATGGCTCTTCGACTTTCTCTCACGCGGCAAACCCTACGAGCTGTCGCTGGACAAGGATCGC
AATTCGGACAGCTACATGCTGTTCATCAATGCGCGCGCGGAAGCCGGTAATGGCAAGCTCGCCGTGGCGGGTCTGGGGCT
TTCCATCAATCATCTGGCCGAGACGATCAACGGATATCGCCTGGGCAGGACCGGCTCGATCTTCCTGGCTCGCGCCGATG
GCAACGTACTGATGCATCGCGATGCGAGACTGGCGGAGGCCGGCACGCCGCTGGCGGACCTGCCAGGCTTCACCACTGAT
GCCGCGCGGACGCTGCTCGCGCGGCAGCCGTTCGCGCACACGGAGGTTGATGCCCCGGAAGGCAAGCGAATCGTTGCGGC
ATCCTATGTGCCCGAGCTGGACTTGTACGTGGTAGCGCAGGTGCCCAAGTCCGAGGTTCTCGAAGAGATTCGCCACTCGT
CGATCATCGCGGCCGTGACCGCGGGCCTGTCGGGCAGCCTGCTCGGCGTCATCGTGCTCTATTTCGTGATCCGTGCGCTG
GTGGCGCCGATCGGTCGCGTGGCCAGCGCGCTCGACGCGATCGCCACGGGCAACGGTGACCTGACCCAGCGGCTGCCGGT
GGACTCGCAGGATGAGGTTGGCCGGCTTGCGGATGCCTTCAACCGCTTCGTCGCATCACTGAATCGCACGATCGGAGATG
TTCGACAAGGCGTGGTGGCCATCGCGGATGCGACACGCGAAATCGCGCAGGGCAATCACGACCTGTCCACCCGCACGGAG
AATCAGGCGGCGGGCGTGGAGGAAACCGCCTCCGCCACCGAACAGCTCACGGCCACCGTGGCCACCAACGCGGACACCGC
GCGCCGCGCGAGCGCGCTGGCAGCCTCGGTATCCATGGACGTGCGCCGCAGCGGCGAGATGATGACCAACGCGGTATCGA
CCATGGAAACGATCACGCATAGCGCGGGCCAGATGTCGAGCATCATCGACGCCATCGAGGGCATCGCATTCCAGACGAAC
ATCCTGGCGCTCAATGCAGCCGTGGAGGCCGCGCGTGCCGGCGAGCATGGTCGCGGCTTTGCCGTGGTGGCGGGAGAAGT
ACGGGGACTGGCACAGCGCTCGGCAAACGCCGCCAAGGACATCAAGACGCTGATCGTCGGCACCGAGGAAGCCGTTCGTA
CCGGACGCTCGCTCGTCAATGAAGCCGGCGATGCCATGCAGCAGATCGTGCCGGCGATGCAGCAGGTCAGCACGCTGGTG
GAAGAGATCGCGGAGGCCAGCGGCGAACAGAGCCGCGGCCTGGGCGAAATCAATCTTGCGATTACCGAGATGGACAGCAC
CAACCAGCAGAATGCCTCGCTGGTGGAGCAGGCGGCCGCCGCCGCGAAATCGCTCGAGGATCAGGCGACCGTGCTCAATC
GCGTGGTCGCCGTGTTCAAGCTGGACGAACGCCTGCTGCAGGCCTGA

Upstream 100 bases:

>100_bases
CTTCGGATCGGGATATGGGGCGTTCCCCCGGGGCTGCTTCTTCGCCCGCTCCCGACAGTCAATGACAACAATCGAAGACC
ACACAGGAGGACCACAATTC

Downstream 100 bases:

>100_bases
TCAGCCGGCCCTGCGCTTCCATTCCGCGTAAAGATCCGGGCACGATGCCGGCCGCACCGGCATGTACCGGATCTTCATCG
ACTGCTCGGCGAACGGCTTC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MRLLRGMTIQRKLILSTITCLLLVVTMTAMLILWQISKGLQERVVDLELPAIVGEIRNDMLHQIARPLAAAQAMAGNTML
RDWESNGLADDYVPTWRRYAAEIKSRNQADAVFWVSASQGKYLTEKGVDRTVQADSAGDKWLFDFLSRGKPYELSLDKDR
NSDSYMLFINARAEAGNGKLAVAGLGLSINHLAETINGYRLGRTGSIFLARADGNVLMHRDARLAEAGTPLADLPGFTTD
AARTLLARQPFAHTEVDAPEGKRIVAASYVPELDLYVVAQVPKSEVLEEIRHSSIIAAVTAGLSGSLLGVIVLYFVIRAL
VAPIGRVASALDAIATGNGDLTQRLPVDSQDEVGRLADAFNRFVASLNRTIGDVRQGVVAIADATREIAQGNHDLSTRTE
NQAAGVEETASATEQLTATVATNADTARRASALAASVSMDVRRSGEMMTNAVSTMETITHSAGQMSSIIDAIEGIAFQTN
ILALNAAVEAARAGEHGRGFAVVAGEVRGLAQRSANAAKDIKTLIVGTEEAVRTGRSLVNEAGDAMQQIVPAMQQVSTLV
EEIAEASGEQSRGLGEINLAITEMDSTNQQNASLVEQAAAAAKSLEDQATVLNRVVAVFKLDERLLQA

Sequences:

>Translated_628_residues
MRLLRGMTIQRKLILSTITCLLLVVTMTAMLILWQISKGLQERVVDLELPAIVGEIRNDMLHQIARPLAAAQAMAGNTML
RDWESNGLADDYVPTWRRYAAEIKSRNQADAVFWVSASQGKYLTEKGVDRTVQADSAGDKWLFDFLSRGKPYELSLDKDR
NSDSYMLFINARAEAGNGKLAVAGLGLSINHLAETINGYRLGRTGSIFLARADGNVLMHRDARLAEAGTPLADLPGFTTD
AARTLLARQPFAHTEVDAPEGKRIVAASYVPELDLYVVAQVPKSEVLEEIRHSSIIAAVTAGLSGSLLGVIVLYFVIRAL
VAPIGRVASALDAIATGNGDLTQRLPVDSQDEVGRLADAFNRFVASLNRTIGDVRQGVVAIADATREIAQGNHDLSTRTE
NQAAGVEETASATEQLTATVATNADTARRASALAASVSMDVRRSGEMMTNAVSTMETITHSAGQMSSIIDAIEGIAFQTN
ILALNAAVEAARAGEHGRGFAVVAGEVRGLAQRSANAAKDIKTLIVGTEEAVRTGRSLVNEAGDAMQQIVPAMQQVSTLV
EEIAEASGEQSRGLGEINLAITEMDSTNQQNASLVEQAAAAAKSLEDQATVLNRVVAVFKLDERLLQA
>Mature_628_residues
MRLLRGMTIQRKLILSTITCLLLVVTMTAMLILWQISKGLQERVVDLELPAIVGEIRNDMLHQIARPLAAAQAMAGNTML
RDWESNGLADDYVPTWRRYAAEIKSRNQADAVFWVSASQGKYLTEKGVDRTVQADSAGDKWLFDFLSRGKPYELSLDKDR
NSDSYMLFINARAEAGNGKLAVAGLGLSINHLAETINGYRLGRTGSIFLARADGNVLMHRDARLAEAGTPLADLPGFTTD
AARTLLARQPFAHTEVDAPEGKRIVAASYVPELDLYVVAQVPKSEVLEEIRHSSIIAAVTAGLSGSLLGVIVLYFVIRAL
VAPIGRVASALDAIATGNGDLTQRLPVDSQDEVGRLADAFNRFVASLNRTIGDVRQGVVAIADATREIAQGNHDLSTRTE
NQAAGVEETASATEQLTATVATNADTARRASALAASVSMDVRRSGEMMTNAVSTMETITHSAGQMSSIIDAIEGIAFQTN
ILALNAAVEAARAGEHGRGFAVVAGEVRGLAQRSANAAKDIKTLIVGTEEAVRTGRSLVNEAGDAMQQIVPAMQQVSTLV
EEIAEASGEQSRGLGEINLAITEMDSTNQQNASLVEQAAAAAKSLEDQATVLNRVVAVFKLDERLLQA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=316, Percent_Identity=52.8481012658228, Blast_Score=270, Evalue=1e-73,
Organism=Escherichia coli, GI1788195, Length=308, Percent_Identity=52.2727272727273, Blast_Score=261, Evalue=1e-70,
Organism=Escherichia coli, GI1787690, Length=324, Percent_Identity=48.4567901234568, Blast_Score=258, Evalue=7e-70,
Organism=Escherichia coli, GI1788194, Length=312, Percent_Identity=46.7948717948718, Blast_Score=244, Evalue=9e-66,
Organism=Escherichia coli, GI1789453, Length=301, Percent_Identity=38.8704318936877, Blast_Score=182, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 67128; Mature: 67128

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLRGMTIQRKLILSTITCLLLVVTMTAMLILWQISKGLQERVVDLELPAIVGEIRNDM
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHQIARPLAAAQAMAGNTMLRDWESNGLADDYVPTWRRYAAEIKSRNQADAVFWVSASQG
HHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCC
KYLTEKGVDRTVQADSAGDKWLFDFLSRGKPYELSLDKDRNSDSYMLFINARAEAGNGKL
CCHHHHCCCCEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEECCCCCCEE
AVAGLGLSINHLAETINGYRLGRTGSIFLARADGNVLMHRDARLAEAGTPLADLPGFTTD
EEEECCCCHHHHHHHHCCEEECCCCCEEEEECCCCEEEECCCHHHHCCCCHHHCCCCCHH
AARTLLARQPFAHTEVDAPEGKRIVAASYVPELDLYVVAQVPKSEVLEEIRHSSIIAAVT
HHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
AGLSGSLLGVIVLYFVIRALVAPIGRVASALDAIATGNGDLTQRLPVDSQDEVGRLADAF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
NRFVASLNRTIGDVRQGVVAIADATREIAQGNHDLSTRTENQAAGVEETASATEQLTATV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHE
ATNADTARRASALAASVSMDVRRSGEMMTNAVSTMETITHSAGQMSSIIDAIEGIAFQTN
ECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHH
ILALNAAVEAARAGEHGRGFAVVAGEVRGLAQRSANAAKDIKTLIVGTEEAVRTGRSLVN
HEEHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHH
EAGDAMQQIVPAMQQVSTLVEEIAEASGEQSRGLGEINLAITEMDSTNQQNASLVEQAAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
AAKSLEDQATVLNRVVAVFKLDERLLQA
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLLRGMTIQRKLILSTITCLLLVVTMTAMLILWQISKGLQERVVDLELPAIVGEIRNDM
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHQIARPLAAAQAMAGNTMLRDWESNGLADDYVPTWRRYAAEIKSRNQADAVFWVSASQG
HHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCC
KYLTEKGVDRTVQADSAGDKWLFDFLSRGKPYELSLDKDRNSDSYMLFINARAEAGNGKL
CCHHHHCCCCEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEECCCCCCEE
AVAGLGLSINHLAETINGYRLGRTGSIFLARADGNVLMHRDARLAEAGTPLADLPGFTTD
EEEECCCCHHHHHHHHCCEEECCCCCEEEEECCCCEEEECCCHHHHCCCCHHHCCCCCHH
AARTLLARQPFAHTEVDAPEGKRIVAASYVPELDLYVVAQVPKSEVLEEIRHSSIIAAVT
HHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
AGLSGSLLGVIVLYFVIRALVAPIGRVASALDAIATGNGDLTQRLPVDSQDEVGRLADAF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
NRFVASLNRTIGDVRQGVVAIADATREIAQGNHDLSTRTENQAAGVEETASATEQLTATV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHE
ATNADTARRASALAASVSMDVRRSGEMMTNAVSTMETITHSAGQMSSIIDAIEGIAFQTN
ECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHH
ILALNAAVEAARAGEHGRGFAVVAGEVRGLAQRSANAAKDIKTLIVGTEEAVRTGRSLVN
HEEHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHH
EAGDAMQQIVPAMQQVSTLVEEIAEASGEQSRGLGEINLAITEMDSTNQQNASLVEQAAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
AAKSLEDQATVLNRVVAVFKLDERLLQA
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]