| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is bug
Identifier: 94312603
GI number: 94312603
Start: 208633
End: 209637
Strand: Direct
Name: bug
Synonym: Rmet_3671
Alternate gene names: NA
Gene position: 208633-209637 (Clockwise)
Preceding gene: 94312602
Following gene: 94312605
Centisome position: 8.09
GC content: 64.88
Gene sequence:
>1005_bases ATGAGTATCACCAAGCAAACGTCGAAGGCGCGCAGACGCCTGCTGGCCGTAGGCGTGGCACTGGCAACTGGTGTTGCCGC CATGACCGGCGCCCAAGCGCAGGGCACCTATCCGACCAAGCCGATCACCATGATCGTGCCGTTCTCGGCAGGTGGCACCA CCGATATCCTGGCCCGCATCGTCGGCCTGCAACTGGGCAAGGCGCTCGGCCAGCCCGTCGTGATCGACAACCGTCCGGGC GCGGGCGGCAACATCGGCGCATCGCTGGCCGCGAAGGCGCCGGGCGATGGCTACACGCTGTTCATGGGCACCATCGGCAC GCACGCGATCAACCAGTCGCTGTACTCGAAGCTGCCGTACGACCCGGTCAAGGACTTCGCGCCGATCACGCGCGTGGCCA TGGTGCCGAACATCGTCGTGGTGAACCCGAAGGTGCCGGTCAACAACATCAAGGAACTGATCGCCTACGTGAAGGCCAAC CCGGACAAGCTGTCGTATGGCTCGTCGGGCAGCGGTTCGTCGATGCACCTGTCGGGTGAACTGTTCAACTCGATGACGGG CCTGCACATCCAGCACATCCCGTACAAGGGTAGCGCTCCGGCCGTGAACGACCTGCTGGGTAACCAGATCGGCCTGATGT TCGACAACATGCCGTCGTCGTACCCGCACGTGAAGGCCGGCAAGTTGCGCGCCATCGCCGTGACCTCGGCCAAGCGCTCG CCGGCTCTGCCGAACGTGCCGACCGTGGCCGAGTCGGGCGTGCCCGGCTATGAAGCCACGTCGTGGTTCGCGCTGTACGC CACGGGCGGCACGCCGCAGGCCGTCGTCGATCGCCTGAACGCCGAAGTGGTGAAGATTCTTGCCATGCCGGAAGTGAAGA AGCAGATGGCCGAGCAGGGTGCCGAACCGCATCCGGAAAAGCCGGCTGAACTGGCTGCCTTCATGAAGTCCGAGGCCGCC AAGTGGGCCAAGGTGGTGAAGGCTTCTGGCGCGACCGTGGACTGA
Upstream 100 bases:
>100_bases AGTGCCCGCCCCCCAGGCACGGGGCGGAATAGCGGTTCAAAGCATTACGTCCGCAGTAAGCCAGATGGCTAGCGGACGTG CATCACTCCTGGAGCACAAG
Downstream 100 bases:
>100_bases TCTCCCGGATCGACCCAGGTCGCCGAAGACCGGCCAGCAGGTATCGCGCCTGCTGGCCGGTTTTTTTTTGGTGGGAATCC TCTTCAGAAAAGAAAAGCCC
Product: extra-cytoplasmic solute receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSITKQTSKARRRLLAVGVALATGVAAMTGAQAQGTYPTKPITMIVPFSAGGTTDILARIVGLQLGKALGQPVVIDNRPG AGGNIGASLAAKAPGDGYTLFMGTIGTHAINQSLYSKLPYDPVKDFAPITRVAMVPNIVVVNPKVPVNNIKELIAYVKAN PDKLSYGSSGSGSSMHLSGELFNSMTGLHIQHIPYKGSAPAVNDLLGNQIGLMFDNMPSSYPHVKAGKLRAIAVTSAKRS PALPNVPTVAESGVPGYEATSWFALYATGGTPQAVVDRLNAEVVKILAMPEVKKQMAEQGAEPHPEKPAELAAFMKSEAA KWAKVVKASGATVD
Sequences:
>Translated_334_residues MSITKQTSKARRRLLAVGVALATGVAAMTGAQAQGTYPTKPITMIVPFSAGGTTDILARIVGLQLGKALGQPVVIDNRPG AGGNIGASLAAKAPGDGYTLFMGTIGTHAINQSLYSKLPYDPVKDFAPITRVAMVPNIVVVNPKVPVNNIKELIAYVKAN PDKLSYGSSGSGSSMHLSGELFNSMTGLHIQHIPYKGSAPAVNDLLGNQIGLMFDNMPSSYPHVKAGKLRAIAVTSAKRS PALPNVPTVAESGVPGYEATSWFALYATGGTPQAVVDRLNAEVVKILAMPEVKKQMAEQGAEPHPEKPAELAAFMKSEAA KWAKVVKASGATVD >Mature_333_residues SITKQTSKARRRLLAVGVALATGVAAMTGAQAQGTYPTKPITMIVPFSAGGTTDILARIVGLQLGKALGQPVVIDNRPGA GGNIGASLAAKAPGDGYTLFMGTIGTHAINQSLYSKLPYDPVKDFAPITRVAMVPNIVVVNPKVPVNNIKELIAYVKANP DKLSYGSSGSGSSMHLSGELFNSMTGLHIQHIPYKGSAPAVNDLLGNQIGLMFDNMPSSYPHVKAGKLRAIAVTSAKRSP ALPNVPTVAESGVPGYEATSWFALYATGGTPQAVVDRLNAEVVKILAMPEVKKQMAEQGAEPHPEKPAELAAFMKSEAAK WAKVVKASGATVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34796; Mature: 34664
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITKQTSKARRRLLAVGVALATGVAAMTGAQAQGTYPTKPITMIVPFSAGGTTDILARI CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH VGLQLGKALGQPVVIDNRPGAGGNIGASLAAKAPGDGYTLFMGTIGTHAINQSLYSKLPY HHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEECHHHHHHHHHHHHHCCC DPVKDFAPITRVAMVPNIVVVNPKVPVNNIKELIAYVKANPDKLSYGSSGSGSSMHLSGE CHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHH LFNSMTGLHIQHIPYKGSAPAVNDLLGNQIGLMFDNMPSSYPHVKAGKLRAIAVTSAKRS HHHHHCCCEEEECCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCC PALPNVPTVAESGVPGYEATSWFALYATGGTPQAVVDRLNAEVVKILAMPEVKKQMAEQG CCCCCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCC AEPHPEKPAELAAFMKSEAAKWAKVVKASGATVD CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SITKQTSKARRRLLAVGVALATGVAAMTGAQAQGTYPTKPITMIVPFSAGGTTDILARI CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH VGLQLGKALGQPVVIDNRPGAGGNIGASLAAKAPGDGYTLFMGTIGTHAINQSLYSKLPY HHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEECHHHHHHHHHHHHHCCC DPVKDFAPITRVAMVPNIVVVNPKVPVNNIKELIAYVKANPDKLSYGSSGSGSSMHLSGE CHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHH LFNSMTGLHIQHIPYKGSAPAVNDLLGNQIGLMFDNMPSSYPHVKAGKLRAIAVTSAKRS HHHHHCCCEEEECCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCC PALPNVPTVAESGVPGYEATSWFALYATGGTPQAVVDRLNAEVVKILAMPEVKKQMAEQG CCCCCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCC AEPHPEKPAELAAFMKSEAAKWAKVVKASGATVD CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]