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The map label for this gene is ycfJ [C]

Identifier: 94312576

GI number: 94312576

Start: 177816

End: 178556

Strand: Direct

Name: ycfJ [C]

Synonym: Rmet_3644

Alternate gene names: 94312576

Gene position: 177816-178556 (Clockwise)

Preceding gene: 94312575

Following gene: 94312579

Centisome position: 6.89

GC content: 66.53

Gene sequence:

>741_bases
ATGTCTTTCCCGTTCCGTCCGGTTGTGTTGGCCGCGCTCGCCGCGAGCGCCCTGGCTGGCTGCGCCGCGCCATATGGCGG
CTATGGCGATGGCTACGGGTCGGGCTATGGCGGCTCCTACGGCTCGTCCGGCTCCTACGGCAGCACCGCATACGGTGGCG
CCACGTATGGCAACGCTGGCTATGGTGGCAGCGGCACGCAGGTCAGCGGTGGCTACCCCACCTATCCGCAGCAGCAAGGC
TACCCTCAACAGCAGGGATATCCTCAGCAGCAAGGCTATCCCCAGCAGCAGGCCTACCCGCAACAACAGACCTATGACCA
GTACGCCTACCCGTCGCAGCCTTCCGCGCCGCAGGGTGGCAACTACGACAGCGGCTATAACAACGGCTACAACGACCAGT
ACGCCGTGCGTTATGGATGGGTGGAGTCGATCGAGCAACTGGCCGGCCAGCCGGCCGACACGAGCGGTGCCGGCGCCGTG
ATCGGCGGTGTGGTGGGTGGTCTGCTGGGTCACCAGGTGGGCGGCGGCCGCGGGAATACCGTCGCAACGATCGGTGGCGC
GGTGGCCGGCGCGCTGGCCGGCAATGAAGTGGAGAAGCGCTCCGGCACCACGCCGGCGGCTTTCCGCGTGCGCGTGCGCA
CCAACGACAACGTCTACGTGACCGTGACGCAGAACAGCCCCTACAACCTGCGCACGGGCGATCGCGTCAAGATTCAGAAC
GGTGTGGCGATGCCGTATTGA

Upstream 100 bases:

>100_bases
GGCGGTTACCCATCACAATCTCCGGTGACACCTGCGGCCGGACGGCGGCACTAGACTCCCGCGCAATACCAATACGCGCA
TCGACGCAGGAGCCTTCATC

Downstream 100 bases:

>100_bases
GCGCGCCGGGCCCGCTGCAGCAGTTGAAACCGTCGAAGACGTACTGCGCAGCGGAACGGCGGCTGCATTGAAGCGTCAGG
ACAGCGCGTTAGTCAGGAAC

Product: surface antigen

Products: NA

Alternate protein names: Membrane Surface Antigen; Surface Antigen

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSFPFRPVVLAALAASALAGCAAPYGGYGDGYGSGYGGSYGSSGSYGSTAYGGATYGNAGYGGSGTQVSGGYPTYPQQQG
YPQQQGYPQQQGYPQQQAYPQQQTYDQYAYPSQPSAPQGGNYDSGYNNGYNDQYAVRYGWVESIEQLAGQPADTSGAGAV
IGGVVGGLLGHQVGGGRGNTVATIGGAVAGALAGNEVEKRSGTTPAAFRVRVRTNDNVYVTVTQNSPYNLRTGDRVKIQN
GVAMPY

Sequences:

>Translated_246_residues
MSFPFRPVVLAALAASALAGCAAPYGGYGDGYGSGYGGSYGSSGSYGSTAYGGATYGNAGYGGSGTQVSGGYPTYPQQQG
YPQQQGYPQQQGYPQQQAYPQQQTYDQYAYPSQPSAPQGGNYDSGYNNGYNDQYAVRYGWVESIEQLAGQPADTSGAGAV
IGGVVGGLLGHQVGGGRGNTVATIGGAVAGALAGNEVEKRSGTTPAAFRVRVRTNDNVYVTVTQNSPYNLRTGDRVKIQN
GVAMPY
>Mature_245_residues
SFPFRPVVLAALAASALAGCAAPYGGYGDGYGSGYGGSYGSSGSYGSTAYGGATYGNAGYGGSGTQVSGGYPTYPQQQGY
PQQQGYPQQQGYPQQQAYPQQQTYDQYAYPSQPSAPQGGNYDSGYNNGYNDQYAVRYGWVESIEQLAGQPADTSGAGAVI
GGVVGGLLGHQVGGGRGNTVATIGGAVAGALAGNEVEKRSGTTPAAFRVRVRTNDNVYVTVTQNSPYNLRTGDRVKIQNG
VAMPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25297; Mature: 25165

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFPFRPVVLAALAASALAGCAAPYGGYGDGYGSGYGGSYGSSGSYGSTAYGGATYGNAG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YGGSGTQVSGGYPTYPQQQGYPQQQGYPQQQGYPQQQAYPQQQTYDQYAYPSQPSAPQGG
CCCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCHHHCCCCHHHHHHCCCCCCCCCCCCC
NYDSGYNNGYNDQYAVRYGWVESIEQLAGQPADTSGAGAVIGGVVGGLLGHQVGGGRGNT
CCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
VATIGGAVAGALAGNEVEKRSGTTPAAFRVRVRTNDNVYVTVTQNSPYNLRTGDRVKIQN
EEEECHHHHHHHCCCHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEECC
GVAMPY
CCCCCC
>Mature Secondary Structure 
SFPFRPVVLAALAASALAGCAAPYGGYGDGYGSGYGGSYGSSGSYGSTAYGGATYGNAG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YGGSGTQVSGGYPTYPQQQGYPQQQGYPQQQGYPQQQAYPQQQTYDQYAYPSQPSAPQGG
CCCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCHHHCCCCHHHHHHCCCCCCCCCCCCC
NYDSGYNNGYNDQYAVRYGWVESIEQLAGQPADTSGAGAVIGGVVGGLLGHQVGGGRGNT
CCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
VATIGGAVAGALAGNEVEKRSGTTPAAFRVRVRTNDNVYVTVTQNSPYNLRTGDRVKIQN
EEEECHHHHHHHCCCHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEECC
GVAMPY
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA