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The map label for this gene is 94312527

Identifier: 94312527

GI number: 94312527

Start: 3907656

End: 3909251

Strand: Reverse

Name: 94312527

Synonym: Rmet_3596

Alternate gene names: NA

Gene position: 3909251-3907656 (Counterclockwise)

Preceding gene: 94312528

Following gene: 94312526

Centisome position: 99.52

GC content: 64.79

Gene sequence:

>1596_bases
ATGGCCATCAACGATATCTACAGCGCCGGCATCGCGTCCGGCTGGAAGGTGCTCGACGCCGCCACGTTCACCGCGCCGCG
CACGTTTGAAGCGGACGTCGCCATCGTCGGCAGCGGCGCGGGCGGTGGCATTGCCGCCGAAATGCTCACCGAGGCGGGAT
TCAAGGTACTGCTGATCGAGGAAGGGGCACTGCGCACTTCGGACAGCTTCAAGGACATGGATGAAGCGCGCGCGTATCGC
GAGCTCTACCAGGAGGCCGCCGCGCGTGCGACGTCCGATGGCGCCATCTCGATCCTGCAGGGGCGCTCCGTGGGCGGCAG
CACCACCGTGAACTGGACGTCCAGCTTCCGCACGCCCCCGAAAACGCTGGCCCATTGGGCCACGGAGCACGCTGTAACCG
GGCATTCCGAAGCCGAGATGGCGCCGTGGTTCGAGAAGATCGAAGCCCGCCTGAATATGGCGCCGTGGGCGATGGACCCG
AATCCGAACAACACCGTGCTCAAGCGCGGTTGCGAAAAGCTCGGCTGGGAATGGCACGTGATTCCGCGCAACGTGAAAGG
CTGCTGGAACTCCGGGTACTGCGGCCTGGGCTGCCCGGTCAACGCCAAGCAATCGATGCTGGTGTCGACGATTCCCAACG
CGCTCGCGCACGGGGCCACGCTCGTGCATCGGCTGCGGGTACGCACGATCGACCATGACGGCAAGACCGTGCGCGGCCTC
ACCGGCGACGCGCTTGGCATCGATGGCTACACGGCCACCGGCGTCACGGTCACCGTTCGCGCAAAGCATGTGATCGCGGC
GGGTGGCGCCATCAATACACCCGCGTTGCTGCTGCGTTCGCGCGTGCCGGACCCGCATGGGCGGATCGGCCTGCGCACGT
TCATCCATCCGGTGAACCTGACTATTGCCGAAATGCCGGAAAAGATCGATCCGTACTATGGCGCGCCGCAGTCGATCGCG
TCCGATTATTTCCAATGGCGCGATGGCGCAACCGGGCCGATGGGCTACAAGCTCGAAGTGCCGCCGATGTTCCCGGGCAT
CAGCTCGGGCGTTTTCAATGCGCTGGGCGATGACCTGCGGCGTCAGATGGCCGCGTTGCCGCATACCAACGCGATGCTGG
CGCTGCTGCGCGACGGCTTCGTGCCGGAGAGCCCCGGCGGGCGCGTGCGCATTGCCGACGACGGTAGTCCCGTGCTGGAC
TACGACGTGAGCGACTATGTCTGGGACGGCGTGCGCCGCGCCTACCTGAGCATGGCCGAAGCCCAGTTTGCTGCAGGTGC
GAAGCGGGTACGACCCGCTCATCTCGACGGTCAGGACTACACGAGCTGGACCCAGGCACGCGAAGCCATCGGCCAACTGC
CCCTGAAGAAATTCCGCGCGTTGCTTTTCACCGCGCACCTGATGGGTGGCTGCGGCATGAGCGACGATCCCAAGCGGGGC
GTGGTGAACAGCACGGGTCGCCACCATCAGCTCGAGAATCTCTCCGTGTTTGACGGCTCGGTGTTTCCAACGAGTATTGG
TGCGAACCCTCAGTTGTCAGTATTCGCACTCACGGCGCAGAATGTCTCAGCCCTATCCCGGAGCATCAAGCCATGA

Upstream 100 bases:

>100_bases
CCAGCGTCGGCTACTTCGTGCTGCCCGATGCGTGGGCCGCCGCCGGCTACCCCGGTCCCAATCCCGCGGTCTATCGCGCC
ATCCATAGCTGACACCCACC

Downstream 100 bases:

>100_bases
TCCAAATAAAGCCCGTCGCAGTCGGGCCTGCAATTTAGAGGATCTATTCGAATATAAGTCTTGTGAAACGGTCGTGGCGC
TGGATAGGCTCCCACAACCG

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MAINDIYSAGIASGWKVLDAATFTAPRTFEADVAIVGSGAGGGIAAEMLTEAGFKVLLIEEGALRTSDSFKDMDEARAYR
ELYQEAAARATSDGAISILQGRSVGGSTTVNWTSSFRTPPKTLAHWATEHAVTGHSEAEMAPWFEKIEARLNMAPWAMDP
NPNNTVLKRGCEKLGWEWHVIPRNVKGCWNSGYCGLGCPVNAKQSMLVSTIPNALAHGATLVHRLRVRTIDHDGKTVRGL
TGDALGIDGYTATGVTVTVRAKHVIAAGGAINTPALLLRSRVPDPHGRIGLRTFIHPVNLTIAEMPEKIDPYYGAPQSIA
SDYFQWRDGATGPMGYKLEVPPMFPGISSGVFNALGDDLRRQMAALPHTNAMLALLRDGFVPESPGGRVRIADDGSPVLD
YDVSDYVWDGVRRAYLSMAEAQFAAGAKRVRPAHLDGQDYTSWTQAREAIGQLPLKKFRALLFTAHLMGGCGMSDDPKRG
VVNSTGRHHQLENLSVFDGSVFPTSIGANPQLSVFALTAQNVSALSRSIKP

Sequences:

>Translated_531_residues
MAINDIYSAGIASGWKVLDAATFTAPRTFEADVAIVGSGAGGGIAAEMLTEAGFKVLLIEEGALRTSDSFKDMDEARAYR
ELYQEAAARATSDGAISILQGRSVGGSTTVNWTSSFRTPPKTLAHWATEHAVTGHSEAEMAPWFEKIEARLNMAPWAMDP
NPNNTVLKRGCEKLGWEWHVIPRNVKGCWNSGYCGLGCPVNAKQSMLVSTIPNALAHGATLVHRLRVRTIDHDGKTVRGL
TGDALGIDGYTATGVTVTVRAKHVIAAGGAINTPALLLRSRVPDPHGRIGLRTFIHPVNLTIAEMPEKIDPYYGAPQSIA
SDYFQWRDGATGPMGYKLEVPPMFPGISSGVFNALGDDLRRQMAALPHTNAMLALLRDGFVPESPGGRVRIADDGSPVLD
YDVSDYVWDGVRRAYLSMAEAQFAAGAKRVRPAHLDGQDYTSWTQAREAIGQLPLKKFRALLFTAHLMGGCGMSDDPKRG
VVNSTGRHHQLENLSVFDGSVFPTSIGANPQLSVFALTAQNVSALSRSIKP
>Mature_530_residues
AINDIYSAGIASGWKVLDAATFTAPRTFEADVAIVGSGAGGGIAAEMLTEAGFKVLLIEEGALRTSDSFKDMDEARAYRE
LYQEAAARATSDGAISILQGRSVGGSTTVNWTSSFRTPPKTLAHWATEHAVTGHSEAEMAPWFEKIEARLNMAPWAMDPN
PNNTVLKRGCEKLGWEWHVIPRNVKGCWNSGYCGLGCPVNAKQSMLVSTIPNALAHGATLVHRLRVRTIDHDGKTVRGLT
GDALGIDGYTATGVTVTVRAKHVIAAGGAINTPALLLRSRVPDPHGRIGLRTFIHPVNLTIAEMPEKIDPYYGAPQSIAS
DYFQWRDGATGPMGYKLEVPPMFPGISSGVFNALGDDLRRQMAALPHTNAMLALLRDGFVPESPGGRVRIADDGSPVLDY
DVSDYVWDGVRRAYLSMAEAQFAAGAKRVRPAHLDGQDYTSWTQAREAIGQLPLKKFRALLFTAHLMGGCGMSDDPKRGV
VNSTGRHHQLENLSVFDGSVFPTSIGANPQLSVFALTAQNVSALSRSIKP

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GMC oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000172
- InterPro:   IPR007867 [H]

Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]

EC number: NA

Molecular weight: Translated: 57106; Mature: 56975

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINDIYSAGIASGWKVLDAATFTAPRTFEADVAIVGSGAGGGIAAEMLTEAGFKVLLIE
CCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEE
EGALRTSDSFKDMDEARAYRELYQEAAARATSDGAISILQGRSVGGSTTVNWTSSFRTPP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEECCCCCCCH
KTLAHWATEHAVTGHSEAEMAPWFEKIEARLNMAPWAMDPNPNNTVLKRGCEKLGWEWHV
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCEEEE
IPRNVKGCWNSGYCGLGCPVNAKQSMLVSTIPNALAHGATLVHRLRVRTIDHDGKTVRGL
ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECC
TGDALGIDGYTATGVTVTVRAKHVIAAGGAINTPALLLRSRVPDPHGRIGLRTFIHPVNL
CCCEECCCCEEECCEEEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHEEECCE
TIAEMPEKIDPYYGAPQSIASDYFQWRDGATGPMGYKLEVPPMFPGISSGVFNALGDDLR
EHHHCCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH
RQMAALPHTNAMLALLRDGFVPESPGGRVRIADDGSPVLDYDVSDYVWDGVRRAYLSMAE
HHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHH
AQFAAGAKRVRPAHLDGQDYTSWTQAREAIGQLPLKKFRALLFTAHLMGGCGMSDDPKRG
HHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
VVNSTGRHHQLENLSVFDGSVFPTSIGANPQLSVFALTAQNVSALSRSIKP
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCC
>Mature Secondary Structure 
AINDIYSAGIASGWKVLDAATFTAPRTFEADVAIVGSGAGGGIAAEMLTEAGFKVLLIE
CCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEE
EGALRTSDSFKDMDEARAYRELYQEAAARATSDGAISILQGRSVGGSTTVNWTSSFRTPP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEECCCCCCCH
KTLAHWATEHAVTGHSEAEMAPWFEKIEARLNMAPWAMDPNPNNTVLKRGCEKLGWEWHV
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCEEEE
IPRNVKGCWNSGYCGLGCPVNAKQSMLVSTIPNALAHGATLVHRLRVRTIDHDGKTVRGL
ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECC
TGDALGIDGYTATGVTVTVRAKHVIAAGGAINTPALLLRSRVPDPHGRIGLRTFIHPVNL
CCCEECCCCEEECCEEEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHEEECCE
TIAEMPEKIDPYYGAPQSIASDYFQWRDGATGPMGYKLEVPPMFPGISSGVFNALGDDLR
EHHHCCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH
RQMAALPHTNAMLALLRDGFVPESPGGRVRIADDGSPVLDYDVSDYVWDGVRRAYLSMAE
HHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHH
AQFAAGAKRVRPAHLDGQDYTSWTQAREAIGQLPLKKFRALLFTAHLMGGCGMSDDPKRG
HHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
VVNSTGRHHQLENLSVFDGSVFPTSIGANPQLSVFALTAQNVSALSRSIKP
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]