| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94312473
Identifier: 94312473
GI number: 94312473
Start: 3838974
End: 3840821
Strand: Reverse
Name: 94312473
Synonym: Rmet_3542
Alternate gene names: NA
Gene position: 3840821-3838974 (Counterclockwise)
Preceding gene: 94312479
Following gene: 94312470
Centisome position: 97.78
GC content: 65.21
Gene sequence:
>1848_bases ATGTGGGAAGTCGAGCATTTCGGCGGATTTTGTAACCCGCCTTGTAGTCCAACAGTTCACCTGATAAAACCTGAGCCCTT GTTCCGGTGTTCGTGCCAAGCCGGTTTCGCCGTTGTCATGCTGCTATCTGCTTTGCGCCCCCATCGTCTGCTTGCCCGTC GTCGCCTCACGTTTGCCGTACTGGCCGCGTGGGGACTGGGTGCGTGCGCGCATACCGGCAGTTCCGTCGCCCCGCCACCG TTCATCGCGGAGAGCACGGTGTCGCCCAAGGCCTCGGTGATGGCGTCCCTGGAGCCTGCGGCGGCAGTTCCTGAACCAGT TGCCGCACCAGCAGTCTCGGCCGATCCGCTTGGCGACCTGATTCTGTCGTCTGCGCCGACGGATGCAGCTGCCAAGCCCG CCGAGGCGGCCAGTCCGCCCGAGGCCTCGCCGCCCGTTAACGCGACAACTTCCCCGGAAGCAGCAACGCCCCCGGATAGC TCGAAGCCCGTCGAAGCGACAAATGCCGTCGATCCGGATTTCGTCGGCCCGCCCGACTCGCTGGCGCCGCCGCCGCCACC ACCTCCGCCACTCGTCCTGTTCCCGCGCCGCCTGGGAGAGTTCCCCGCGCAGGCCGCTGCGCCGCAAGGCGAAGGGACCG GCGACCCCGCATCCGCGCCAACCCCTTCCGACGTGCCGCCGGTCCTGCGCTCGCAATTGCCGGCAGACAATCTGGCCGGG GATTCCGTTTGGCAACTCGGCTATAGCGGCCGTGCGGCCGTAGAGGACCGGTCAGGCCTGCAACACGCCTGCGCCGGCGG TGGCACGCCTTCGGCCGGCTTTGGCAGGGGGCTTGCCTGCACCAGCTCGGGCGAGGTCAAGATTCGCGAGTCTCTGATGG ATATGGGAGGCGGCACGCAGGTCCAGCTCGTCGCGCAGGCCAAGGGCACCGATACGACATCGGTCAACGGCAATGCCGCG GCGGTGGACCCTTACGCGCTGGTGCAGAACTTCTATACCTCCGTCAGCGGCCTCTCGGGAACACCCATGCTGCAGGAAGC CAGCGTCTGGGCTGGCCGCCGCGACAGCAATCCATTCCTGATGTCGTCGGGCCTGCTGCCGCCGAGTTCGCCATCGATGC GTTTCGGCGTCGACAACGCCAAAGTGGGCGATTTCGGGCTGAGTTATCAATACACTGCACGTAACGAACTAAATGGCGCC AAGCTGCCCAGCTATCACACAGTCCGATCGGCGCCGATCGGCACCAATGACAAGGGTTCGGTCCAGGTAGGCTTCACCCG CGTGGAAGCCATGCAGGAAATCGAGAACTCGGGCGGCGCATGGTGGGCATCGGCCATGCACGAGCAGAAGGGCGTGCTCT ATGGCACCAACCGGCTTGGCCTGCAGTATGGACAGGGATCGCGCGTGGCCATGACCGGCTATTCGGGCATGGGCAACGAT CTGTCACGCGTTCGGGTATCGGATTCGGTGGAATGGAAGAGCCGGACAGGCCTGGCGGGTTCGGTGGAGTCCAGCCTGCA GCTCGATCATTCGGGCATCGGCACGCTGCAATGGGCCGCCACGCGCGTCCGACCGGCGTTCGTTGCCAACGACCAGTTCC GGCTGACGTTCGAGGTCGCGCACGACCAGATCTCGTCTGGGTTTGGCGTTGGCGGTCAGCGCACGGCGTTCACCGTGGCG CCGACACTGACGCTCGGCAAATCGGCCGGCAACGCCAACCTGCGTGCGTTCTATACCTACAGCCGTGCCAATGATGTGGA TGGCATCACCTTCGCCTCGCCAGCCGATGCCTGGGCATCCCAGACATCCGGCTCGATCTTCGGCGTTCAGCTCAATCGGC GCTGGTAA
Upstream 100 bases:
>100_bases ATGGGGGTTTTCGCTAGGAATTCGCACTTCTGCAACGGATAACCGGCATGTTCGGAAACGGTGCGCAGGGCATGGCCGGA CCGGCCCGCGGCCTTTCGCA
Downstream 100 bases:
>100_bases GCTCCGTGCGGCCTTGCCAGCGTTGGGCTGGCGGGCTTGAGGCCGCTGCCATGGGGGCAGGGCAGAGCCACTGGAACAGC AACGCAGCATTCGCGGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: Maltoporin; Porin LamB Type; Maltoporin-Like Channel
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MWEVEHFGGFCNPPCSPTVHLIKPEPLFRCSCQAGFAVVMLLSALRPHRLLARRRLTFAVLAAWGLGACAHTGSSVAPPP FIAESTVSPKASVMASLEPAAAVPEPVAAPAVSADPLGDLILSSAPTDAAAKPAEAASPPEASPPVNATTSPEAATPPDS SKPVEATNAVDPDFVGPPDSLAPPPPPPPPLVLFPRRLGEFPAQAAAPQGEGTGDPASAPTPSDVPPVLRSQLPADNLAG DSVWQLGYSGRAAVEDRSGLQHACAGGGTPSAGFGRGLACTSSGEVKIRESLMDMGGGTQVQLVAQAKGTDTTSVNGNAA AVDPYALVQNFYTSVSGLSGTPMLQEASVWAGRRDSNPFLMSSGLLPPSSPSMRFGVDNAKVGDFGLSYQYTARNELNGA KLPSYHTVRSAPIGTNDKGSVQVGFTRVEAMQEIENSGGAWWASAMHEQKGVLYGTNRLGLQYGQGSRVAMTGYSGMGND LSRVRVSDSVEWKSRTGLAGSVESSLQLDHSGIGTLQWAATRVRPAFVANDQFRLTFEVAHDQISSGFGVGGQRTAFTVA PTLTLGKSAGNANLRAFYTYSRANDVDGITFASPADAWASQTSGSIFGVQLNRRW
Sequences:
>Translated_615_residues MWEVEHFGGFCNPPCSPTVHLIKPEPLFRCSCQAGFAVVMLLSALRPHRLLARRRLTFAVLAAWGLGACAHTGSSVAPPP FIAESTVSPKASVMASLEPAAAVPEPVAAPAVSADPLGDLILSSAPTDAAAKPAEAASPPEASPPVNATTSPEAATPPDS SKPVEATNAVDPDFVGPPDSLAPPPPPPPPLVLFPRRLGEFPAQAAAPQGEGTGDPASAPTPSDVPPVLRSQLPADNLAG DSVWQLGYSGRAAVEDRSGLQHACAGGGTPSAGFGRGLACTSSGEVKIRESLMDMGGGTQVQLVAQAKGTDTTSVNGNAA AVDPYALVQNFYTSVSGLSGTPMLQEASVWAGRRDSNPFLMSSGLLPPSSPSMRFGVDNAKVGDFGLSYQYTARNELNGA KLPSYHTVRSAPIGTNDKGSVQVGFTRVEAMQEIENSGGAWWASAMHEQKGVLYGTNRLGLQYGQGSRVAMTGYSGMGND LSRVRVSDSVEWKSRTGLAGSVESSLQLDHSGIGTLQWAATRVRPAFVANDQFRLTFEVAHDQISSGFGVGGQRTAFTVA PTLTLGKSAGNANLRAFYTYSRANDVDGITFASPADAWASQTSGSIFGVQLNRRW >Mature_615_residues MWEVEHFGGFCNPPCSPTVHLIKPEPLFRCSCQAGFAVVMLLSALRPHRLLARRRLTFAVLAAWGLGACAHTGSSVAPPP FIAESTVSPKASVMASLEPAAAVPEPVAAPAVSADPLGDLILSSAPTDAAAKPAEAASPPEASPPVNATTSPEAATPPDS SKPVEATNAVDPDFVGPPDSLAPPPPPPPPLVLFPRRLGEFPAQAAAPQGEGTGDPASAPTPSDVPPVLRSQLPADNLAG DSVWQLGYSGRAAVEDRSGLQHACAGGGTPSAGFGRGLACTSSGEVKIRESLMDMGGGTQVQLVAQAKGTDTTSVNGNAA AVDPYALVQNFYTSVSGLSGTPMLQEASVWAGRRDSNPFLMSSGLLPPSSPSMRFGVDNAKVGDFGLSYQYTARNELNGA KLPSYHTVRSAPIGTNDKGSVQVGFTRVEAMQEIENSGGAWWASAMHEQKGVLYGTNRLGLQYGQGSRVAMTGYSGMGND LSRVRVSDSVEWKSRTGLAGSVESSLQLDHSGIGTLQWAATRVRPAFVANDQFRLTFEVAHDQISSGFGVGGQRTAFTVA PTLTLGKSAGNANLRAFYTYSRANDVDGITFASPADAWASQTSGSIFGVQLNRRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63869; Mature: 63869
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWEVEHFGGFCNPPCSPTVHLIKPEPLFRCSCQAGFAVVMLLSALRPHRLLARRRLTFAV CCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHH LAAWGLGACAHTGSSVAPPPFIAESTVSPKASVMASLEPAAAVPEPVAAPAVSADPLGDL HHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCHHHH ILSSAPTDAAAKPAEAASPPEASPPVNATTSPEAATPPDSSKPVEATNAVDPDFVGPPDS HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LAPPPPPPPPLVLFPRRLGEFPAQAAAPQGEGTGDPASAPTPSDVPPVLRSQLPADNLAG CCCCCCCCCCEEECCHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC DSVWQLGYSGRAAVEDRSGLQHACAGGGTPSAGFGRGLACTSSGEVKIRESLMDMGGGTQ CCEEECCCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCEEECCCCCEEEHHHHHHCCCCCE VQLVAQAKGTDTTSVNGNAAAVDPYALVQNFYTSVSGLSGTPMLQEASVWAGRRDSNPFL EEEEEECCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEE MSSGLLPPSSPSMRFGVDNAKVGDFGLSYQYTARNELNGAKLPSYHTVRSAPIGTNDKGS EECCCCCCCCCCEEECCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCC VQVGFTRVEAMQEIENSGGAWWASAMHEQKGVLYGTNRLGLQYGQGSRVAMTGYSGMGND EEECHHHHHHHHHHHHCCCEEEHHHHHHCCCEEEECCCCCEEECCCCEEEEECCCCCCCC LSRVRVSDSVEWKSRTGLAGSVESSLQLDHSGIGTLQWAATRVRPAFVANDQFRLTFEVA HHEEEECCCCCHHHCCCCCCCCHHHEEECCCCCCEEEEHHHHCCEEEEECCCEEEEEEEE HDQISSGFGVGGQRTAFTVAPTLTLGKSAGNANLRAFYTYSRANDVDGITFASPADAWAS HHHHHCCCCCCCCCEEEEEECEEEECCCCCCCCEEEEEEECCCCCCCCEEECCCHHHHHH QTSGSIFGVQLNRRW CCCCCEEEEEECCCC >Mature Secondary Structure MWEVEHFGGFCNPPCSPTVHLIKPEPLFRCSCQAGFAVVMLLSALRPHRLLARRRLTFAV CCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHH LAAWGLGACAHTGSSVAPPPFIAESTVSPKASVMASLEPAAAVPEPVAAPAVSADPLGDL HHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCHHHH ILSSAPTDAAAKPAEAASPPEASPPVNATTSPEAATPPDSSKPVEATNAVDPDFVGPPDS HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LAPPPPPPPPLVLFPRRLGEFPAQAAAPQGEGTGDPASAPTPSDVPPVLRSQLPADNLAG CCCCCCCCCCEEECCHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC DSVWQLGYSGRAAVEDRSGLQHACAGGGTPSAGFGRGLACTSSGEVKIRESLMDMGGGTQ CCEEECCCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCEEECCCCCEEEHHHHHHCCCCCE VQLVAQAKGTDTTSVNGNAAAVDPYALVQNFYTSVSGLSGTPMLQEASVWAGRRDSNPFL EEEEEECCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEE MSSGLLPPSSPSMRFGVDNAKVGDFGLSYQYTARNELNGAKLPSYHTVRSAPIGTNDKGS EECCCCCCCCCCEEECCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCC VQVGFTRVEAMQEIENSGGAWWASAMHEQKGVLYGTNRLGLQYGQGSRVAMTGYSGMGND EEECHHHHHHHHHHHHCCCEEEHHHHHHCCCEEEECCCCCEEECCCCEEEEECCCCCCCC LSRVRVSDSVEWKSRTGLAGSVESSLQLDHSGIGTLQWAATRVRPAFVANDQFRLTFEVA HHEEEECCCCCHHHCCCCCCCCHHHEEECCCCCCEEEEHHHHCCEEEEECCCEEEEEEEE HDQISSGFGVGGQRTAFTVAPTLTLGKSAGNANLRAFYTYSRANDVDGITFASPADAWAS HHHHHCCCCCCCCCEEEEEECEEEECCCCCCCCEEEEEEECCCCCCCCEEECCCHHHHHH QTSGSIFGVQLNRRW CCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA