Click here to switch to the map view.

The map label for this gene is 94312461

Identifier: 94312461

GI number: 94312461

Start: 3823796

End: 3824482

Strand: Reverse

Name: 94312461

Synonym: Rmet_3530

Alternate gene names: NA

Gene position: 3824482-3823796 (Counterclockwise)

Preceding gene: 94312462

Following gene: 94312460

Centisome position: 97.36

GC content: 66.08

Gene sequence:

>687_bases
ATGCGGATGCCCCCACGCGTGCGCGAATGGTGGATTGCCGGCGTGCTGGCCGGCGTGACATACGGCGTGATGCTGATCCA
GGTGTCCGCGTACTTGCCTCCCGGCACGCCGTTGACGGGCCAGATCGCCTATCAGCCGATCTGGAAAACCGCGATGGCGG
TCATGCTCGCGCGCGCGGCGTGGTTCCATCGCCCGCTAGGAGAGCGGCGCTGGCTCGTGACCGCGCTGCTCTTCTCCGCG
CTGGGAGATCTATTGCTGGCGCTGCCCGGTCTGAAGATCTCGTTCATTGGCGGGCTCGGGGCGTTCCTGATGGCGCACCT
GGCCTATCTGCGCCTGTTCGTGCCGATGATGGGAGACCTGCGGCCGCATCGGCTGATCGGCTGTGGTCTGATCATCGGCG
CGGCGGGCGCATTGCTTGGGCGCTTCTGGCCGAATCTCGGCGATCTGATGTGGCCGGTCACGGTCTACATCTGCGTGCTG
GCGGCGATGGCCTGCACGACGATGCTGGCATCGCTGCCGACGGCGCTGGCGGCAATCGGCGCCCTGTTTTTCGTGGCGTC
GGACGCGATGATCGGTATCGCGAAATTCCTGTCGTTGTTCGACACGTACCAACTCGGCATCTGGTGGACCTACGCCATCG
CACAGGTGCTGCTGGTGGCGGGCGTGGTGGCCGAGCGGGACGCGTGA

Upstream 100 bases:

>100_bases
TGCCACCCACGCGCGTTGAAGCGCTGTACGCGCCCGATGTGTTCGGTGAGACGCCGAACGCCAAGATGACGGTGGGGGCC
AAACCGTGAGCTGGATCGCC

Downstream 100 bases:

>100_bases
GAGGTTGGGGTTCGTGCTGAAGCGTGGTGGGATTCATGTTGCTGTGGCGCTGCTGTTATTCGCGGGCGCCGCGCAGGCCG
TGCCCACGTTTCGAGAGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRMPPRVREWWIAGVLAGVTYGVMLIQVSAYLPPGTPLTGQIAYQPIWKTAMAVMLARAAWFHRPLGERRWLVTALLFSA
LGDLLLALPGLKISFIGGLGAFLMAHLAYLRLFVPMMGDLRPHRLIGCGLIIGAAGALLGRFWPNLGDLMWPVTVYICVL
AAMACTTMLASLPTALAAIGALFFVASDAMIGIAKFLSLFDTYQLGIWWTYAIAQVLLVAGVVAERDA

Sequences:

>Translated_228_residues
MRMPPRVREWWIAGVLAGVTYGVMLIQVSAYLPPGTPLTGQIAYQPIWKTAMAVMLARAAWFHRPLGERRWLVTALLFSA
LGDLLLALPGLKISFIGGLGAFLMAHLAYLRLFVPMMGDLRPHRLIGCGLIIGAAGALLGRFWPNLGDLMWPVTVYICVL
AAMACTTMLASLPTALAAIGALFFVASDAMIGIAKFLSLFDTYQLGIWWTYAIAQVLLVAGVVAERDA
>Mature_228_residues
MRMPPRVREWWIAGVLAGVTYGVMLIQVSAYLPPGTPLTGQIAYQPIWKTAMAVMLARAAWFHRPLGERRWLVTALLFSA
LGDLLLALPGLKISFIGGLGAFLMAHLAYLRLFVPMMGDLRPHRLIGCGLIIGAAGALLGRFWPNLGDLMWPVTVYICVL
AAMACTTMLASLPTALAAIGALFFVASDAMIGIAKFLSLFDTYQLGIWWTYAIAQVLLVAGVVAERDA

Specific function: Unknown

COG id: COG3714

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM86 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012506 [H]

Pfam domain/function: PF07947 YhhN [H]

EC number: NA

Molecular weight: Translated: 24734; Mature: 24734

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMPPRVREWWIAGVLAGVTYGVMLIQVSAYLPPGTPLTGQIAYQPIWKTAMAVMLARAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
WFHRPLGERRWLVTALLFSALGDLLLALPGLKISFIGGLGAFLMAHLAYLRLFVPMMGDL
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RPHRLIGCGLIIGAAGALLGRFWPNLGDLMWPVTVYICVLAAMACTTMLASLPTALAAIG
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFFVASDAMIGIAKFLSLFDTYQLGIWWTYAIAQVLLVAGVVAERDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRMPPRVREWWIAGVLAGVTYGVMLIQVSAYLPPGTPLTGQIAYQPIWKTAMAVMLARAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
WFHRPLGERRWLVTALLFSALGDLLLALPGLKISFIGGLGAFLMAHLAYLRLFVPMMGDL
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RPHRLIGCGLIIGAAGALLGRFWPNLGDLMWPVTVYICVLAAMACTTMLASLPTALAAIG
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFFVASDAMIGIAKFLSLFDTYQLGIWWTYAIAQVLLVAGVVAERDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]