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The map label for this gene is atpB [H]

Identifier: 94312431

GI number: 94312431

Start: 3790381

End: 3791250

Strand: Reverse

Name: atpB [H]

Synonym: Rmet_3500

Alternate gene names: 94312431

Gene position: 3791250-3790381 (Counterclockwise)

Preceding gene: 94312432

Following gene: 94312430

Centisome position: 96.52

GC content: 59.43

Gene sequence:

>870_bases
ATGTCAGCTGAAGCTACTCAAGGCGCGGAGCACGTGCTCACACCCTCAGGCTATATCGCCGAGCACTTGCAGAACTTTAA
TTCGGTCGGCGGCAAGCAGCATTCCGTGGTCGATTTCAGTGTCCTGAACTACGACACTGTGTTCTGGTCGGTGCTGTGCG
GCGTGATCGCCATCCTGTTCCTCTACATGGCCGCTCGCCGTGTGACGGCCGGCGTGCCGGGCCGTTTCCAGGCCTTCGTG
GAAATGATCGTCGAGATGGTGGACGACCAGGCCAAGGGAATCATTCACGGCGACCGCTCGTGGATCGCTCCGCTGGCGCT
GATGGTGTTCTGCTGGATCACCATGATGAACGCGATCGACTTGATTCCTGTGGATTGGGTCACGGGCCTGAACGGTCTGC
TGGGCATCTTCCACATTCATCTTCCGCACCACCGCGCAGTGGCCACGGCCGACCTGAACGGCACGCTGGGCATGTCGTGC
TCGGTCCTGGTGCTGATGATCTACTACAGCTTCAAGATCAAGGGCGCGGGCGGTTTCATGCACGAACTGTTCTCGGCCCC
GTTCGGCGCCAAGTGGTACCTGGCCCCGTTCAACCTGGTCCTGAACATCATCGAATTCCTGGCCAAGGCCGTTTCGCTCG
GCATGCGGTTGTTCGGCAACATGTACGCCGGCGAACTCGTGTTCCTGCTGATCGCGCTGCTGGGTTCCATCTGGACGTTC
AGTGCTGACCTGAGCGCGCTGGGCTTCGTCGGACATGTGGTTGCCGGTACCGTCTGGGCCATCTTCCACATCCTGATCGT
TCTGCTGCAGGCATTCATTTTCATGATGCTGACGCTGGTGTACATCGGCCAGGCTCACGATCACCACTGA

Upstream 100 bases:

>100_bases
TGACCGGTCATGTGACCGAAGGCTAAGCAAGACGTGTACCGGGAATCGGCCGAAGGCGGGTTTCCGATGTCAGATTTCGC
AATATACGGTTCGTTTCGAC

Downstream 100 bases:

>100_bases
TTTTCGGTTTTTGGTTTTTTGGTTTTTTGGTTCTAAGTCTCTCTAAATTAAAGGAGTCATCATGCAAGCATATCTCGCCA
ACATCCAGGGTCTGACCGCT

Product: F0F1 ATP synthase subunit A

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F0 sector subunit a; F-ATPase subunit 6 [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSAEATQGAEHVLTPSGYIAEHLQNFNSVGGKQHSVVDFSVLNYDTVFWSVLCGVIAILFLYMAARRVTAGVPGRFQAFV
EMIVEMVDDQAKGIIHGDRSWIAPLALMVFCWITMMNAIDLIPVDWVTGLNGLLGIFHIHLPHHRAVATADLNGTLGMSC
SVLVLMIYYSFKIKGAGGFMHELFSAPFGAKWYLAPFNLVLNIIEFLAKAVSLGMRLFGNMYAGELVFLLIALLGSIWTF
SADLSALGFVGHVVAGTVWAIFHILIVLLQAFIFMMLTLVYIGQAHDHH

Sequences:

>Translated_289_residues
MSAEATQGAEHVLTPSGYIAEHLQNFNSVGGKQHSVVDFSVLNYDTVFWSVLCGVIAILFLYMAARRVTAGVPGRFQAFV
EMIVEMVDDQAKGIIHGDRSWIAPLALMVFCWITMMNAIDLIPVDWVTGLNGLLGIFHIHLPHHRAVATADLNGTLGMSC
SVLVLMIYYSFKIKGAGGFMHELFSAPFGAKWYLAPFNLVLNIIEFLAKAVSLGMRLFGNMYAGELVFLLIALLGSIWTF
SADLSALGFVGHVVAGTVWAIFHILIVLLQAFIFMMLTLVYIGQAHDHH
>Mature_288_residues
SAEATQGAEHVLTPSGYIAEHLQNFNSVGGKQHSVVDFSVLNYDTVFWSVLCGVIAILFLYMAARRVTAGVPGRFQAFVE
MIVEMVDDQAKGIIHGDRSWIAPLALMVFCWITMMNAIDLIPVDWVTGLNGLLGIFHIHLPHHRAVATADLNGTLGMSCS
VLVLMIYYSFKIKGAGGFMHELFSAPFGAKWYLAPFNLVLNIIEFLAKAVSLGMRLFGNMYAGELVFLLIALLGSIWTFS
ADLSALGFVGHVVAGTVWAIFHILIVLLQAFIFMMLTLVYIGQAHDHH

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane [H]

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family [H]

Homologues:

Organism=Escherichia coli, GI1790176, Length=288, Percent_Identity=41.3194444444444, Blast_Score=208, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000568
- InterPro:   IPR023011 [H]

Pfam domain/function: PF00119 ATP-synt_A [H]

EC number: 3.6.3.14

Molecular weight: Translated: 31764; Mature: 31633

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEATQGAEHVLTPSGYIAEHLQNFNSVGGKQHSVVDFSVLNYDTVFWSVLCGVIAILF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
LYMAARRVTAGVPGRFQAFVEMIVEMVDDQAKGIIHGDRSWIAPLALMVFCWITMMNAID
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHH
LIPVDWVTGLNGLLGIFHIHLPHHRAVATADLNGTLGMSCSVLVLMIYYSFKIKGAGGFM
CCCHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
HELFSAPFGAKWYLAPFNLVLNIIEFLAKAVSLGMRLFGNMYAGELVFLLIALLGSIWTF
HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SADLSALGFVGHVVAGTVWAIFHILIVLLQAFIFMMLTLVYIGQAHDHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SAEATQGAEHVLTPSGYIAEHLQNFNSVGGKQHSVVDFSVLNYDTVFWSVLCGVIAILF
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
LYMAARRVTAGVPGRFQAFVEMIVEMVDDQAKGIIHGDRSWIAPLALMVFCWITMMNAID
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHH
LIPVDWVTGLNGLLGIFHIHLPHHRAVATADLNGTLGMSCSVLVLMIYYSFKIKGAGGFM
CCCHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
HELFSAPFGAKWYLAPFNLVLNIIEFLAKAVSLGMRLFGNMYAGELVFLLIALLGSIWTF
HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SADLSALGFVGHVVAGTVWAIFHILIVLLQAFIFMMLTLVYIGQAHDHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA