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The map label for this gene is atpF [H]

Identifier: 94312429

GI number: 94312429

Start: 3789477

End: 3789947

Strand: Reverse

Name: atpF [H]

Synonym: Rmet_3498

Alternate gene names: 94312429

Gene position: 3789947-3789477 (Counterclockwise)

Preceding gene: 335055672

Following gene: 94312428

Centisome position: 96.48

GC content: 60.3

Gene sequence:

>471_bases
ATGAATCTGAACGCAACGTTTTTTGCGCAGATGGTCGTGTTCTTCATCCTGTGGTGGGTTGTTGCCAAATTCATTTGGCC
GCCGCTGGTGAAGGCGCTCGACGAACGCGCAAAGAAGATCGCCGATGGCCTCGCCGCTGCCGAAAAAGGCAAGGCGGAGC
TTGAACTCGCCAACAAGCGTGTGGACCAGGCTATGGCCGAAGCCCGCACCGAAGGCGCCCAACGTGTGGCCGACGCTGAA
AAGCGTGCCCAGTTGACCGCCGACGAGATCAAGCAGAACGCCCAGGCAGAAGCCGCACGCATCATCGCTCAGGCCAAGGC
CGAAGCAGAACAGCAAGTGACCCGCGCGCGTGAATCGCTGCGCGACCAGGTCGCCGTGCTGGCCGTGAAGGGTGCAGAGC
AGATCCTCAAGCGTGAAGTGAACGCGCAGGTCCACGCAGACCTGCTCAATCAACTCAAGGCTGAGCTCTAA

Upstream 100 bases:

>100_bases
TTCGGTCTGCATGATGCTGACGGGCGGCGTGGGCCTCAGTCCGATGGCCTGGCCGCCCTTGTGCATTTATCTGTAGTTTG
ATTACCGAAAGGAACACACC

Downstream 100 bases:

>100_bases
TCATGGCTGAAACCGCAACCATTGCCCGTCCCTACGCGGAGGCGCTCTTCCGCGTCGCCAGTGAAGCCGGTGCAGGCAAC
CTGGGTGCATGGTCCGAGCT

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MNLNATFFAQMVVFFILWWVVAKFIWPPLVKALDERAKKIADGLAAAEKGKAELELANKRVDQAMAEARTEGAQRVADAE
KRAQLTADEIKQNAQAEAARIIAQAKAEAEQQVTRARESLRDQVAVLAVKGAEQILKREVNAQVHADLLNQLKAEL

Sequences:

>Translated_156_residues
MNLNATFFAQMVVFFILWWVVAKFIWPPLVKALDERAKKIADGLAAAEKGKAELELANKRVDQAMAEARTEGAQRVADAE
KRAQLTADEIKQNAQAEAARIIAQAKAEAEQQVTRARESLRDQVAVLAVKGAEQILKREVNAQVHADLLNQLKAEL
>Mature_156_residues
MNLNATFFAQMVVFFILWWVVAKFIWPPLVKALDERAKKIADGLAAAEKGKAELELANKRVDQAMAEARTEGAQRVADAE
KRAQLTADEIKQNAQAEAARIIAQAKAEAEQQVTRARESLRDQVAVLAVKGAEQILKREVNAQVHADLLNQLKAEL

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=42.9487179487179, Blast_Score=124, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 17273; Mature: 17273

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNATFFAQMVVFFILWWVVAKFIWPPLVKALDERAKKIADGLAAAEKGKAELELANKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VDQAMAEARTEGAQRVADAEKRAQLTADEIKQNAQAEAARIIAQAKAEAEQQVTRARESL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDQVAVLAVKGAEQILKREVNAQVHADLLNQLKAEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLNATFFAQMVVFFILWWVVAKFIWPPLVKALDERAKKIADGLAAAEKGKAELELANKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VDQAMAEARTEGAQRVADAEKRAQLTADEIKQNAQAEAARIIAQAKAEAEQQVTRARESL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDQVAVLAVKGAEQILKREVNAQVHADLLNQLKAEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA