| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is ydfG [H]
Identifier: 94312371
GI number: 94312371
Start: 3714934
End: 3715392
Strand: Reverse
Name: ydfG [H]
Synonym: Rmet_3440
Alternate gene names: 94312371
Gene position: 3715392-3714934 (Counterclockwise)
Preceding gene: 94312373
Following gene: 94312370
Centisome position: 94.59
GC content: 66.45
Gene sequence:
>459_bases ATGGATTTCCAGACCTTCACGAAATCGGCGTCCGACGTCTACGCGGCGCTGAGCGGGGTAAGCAAGGCAGTGGAAGCGGC GGGGATGGACAAAGCGCTGACGGAGCTGCTCAAGCTGCGCGTCTCGCAGATCAACGGCTGCGCGTTCTGCCTGCAGTTCC ATCTGAACATTGCGCGCAAACTCGATATCGACCCGCGCAAGTTCGACCTGCTGGCCGGCTGGCGCGACGCGGGCATCTAC ACGGCGCGCGAAGCCGCGGCGCTAGGCTGGGCCGAGGCGCTGACGTCCATGAACGATCCCGCCGCGCGCGATGTGGCCTT CGCCACCGCGCGGACGGTGTTCAGCGAGCAGGAACTGATGTTGCTGGCAGCCGCGATTGCCTCGATCAACGCCTGGAACC GCATTGCGGTCGGCTTGCATTTCGCGCCGCCGCCAGCCTCGCCCGGGGGCCGGCCATGA
Upstream 100 bases:
>100_bases TTCCCTTTGTTTTTCCCTTTGGATGACAGGGTCTTTCCCATAATGTCAGAGCTCTTACATTAATCTTCGAACTCTGACAT CTTATCGCAAGGAGCCAGTC
Downstream 100 bases:
>100_bases ACGGCGTCACCGCGGAGCAGATCGAGATCCGCGGCATCGATACGCCCGGAGACGTGGCTGCGGCGTTTCCCCTGATGCAC CAGTTGCGCCCGCATCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MDFQTFTKSASDVYAALSGVSKAVEAAGMDKALTELLKLRVSQINGCAFCLQFHLNIARKLDIDPRKFDLLAGWRDAGIY TAREAAALGWAEALTSMNDPAARDVAFATARTVFSEQELMLLAAAIASINAWNRIAVGLHFAPPPASPGGRP
Sequences:
>Translated_152_residues MDFQTFTKSASDVYAALSGVSKAVEAAGMDKALTELLKLRVSQINGCAFCLQFHLNIARKLDIDPRKFDLLAGWRDAGIY TAREAAALGWAEALTSMNDPAARDVAFATARTVFSEQELMLLAAAIASINAWNRIAVGLHFAPPPASPGGRP >Mature_152_residues MDFQTFTKSASDVYAALSGVSKAVEAAGMDKALTELLKLRVSQINGCAFCLQFHLNIARKLDIDPRKFDLLAGWRDAGIY TAREAAALGWAEALTSMNDPAARDVAFATARTVFSEQELMLLAAAIASINAWNRIAVGLHFAPPPASPGGRP
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004675 - InterPro: IPR003779 [H]
Pfam domain/function: PF02627 CMD [H]
EC number: NA
Molecular weight: Translated: 16268; Mature: 16268
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFQTFTKSASDVYAALSGVSKAVEAAGMDKALTELLKLRVSQINGCAFCLQFHLNIARK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LDIDPRKFDLLAGWRDAGIYTAREAAALGWAEALTSMNDPAARDVAFATARTVFSEQELM CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LLAAAIASINAWNRIAVGLHFAPPPASPGGRP HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MDFQTFTKSASDVYAALSGVSKAVEAAGMDKALTELLKLRVSQINGCAFCLQFHLNIARK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LDIDPRKFDLLAGWRDAGIYTAREAAALGWAEALTSMNDPAARDVAFATARTVFSEQELM CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LLAAAIASINAWNRIAVGLHFAPPPASPGGRP HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]