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The map label for this gene is secE [H]

Identifier: 94312271

GI number: 94312271

Start: 3610352

End: 3610732

Strand: Reverse

Name: secE [H]

Synonym: Rmet_3340

Alternate gene names: 94312271

Gene position: 3610732-3610352 (Counterclockwise)

Preceding gene: 94312272

Following gene: 94312270

Centisome position: 91.92

GC content: 62.47

Gene sequence:

>381_bases
ATGGCCAATCCCAATGTCGAAACCGTAGGCGCCTCGAGCGGCAAGTGGCTGCTCGGCGTGGCGGTGCTCCTGGTGGTTGC
CGGGGTCATCGGCTTCTACGCGCTCGCGCAGCAGCCCTCGTATGTACGAGGTGCCGCGCTCTTCGCCGGTATCGCAGCTG
GCGTGGTTGTCGCGCTGCTGTCGGCGCCGGGCAAGGACTTCGTGGGATTCGCTCGTGAATCGTATCGGGAAGTTCGCAAG
GTCGTCTGGCCGACGCGCAAGGAAGCCGGTCAGATGACCGGCCTTGTGTTCGTCTTCGTCGTCATCATGGCGCTGTTCCT
GTGGTCGGCTGACAAGCTCATCGAGTGGGTGATTTTCTCCCTCGTGCTGGGCTGGAAATAA

Upstream 100 bases:

>100_bases
AAAACCGAAGGTTGGGGGTTCGATTCCCTCTGCCCCTGCCAAATCAATCAGCCGCGTCGCGAGGGGTAATCGTGACGCGG
CTTAGTCTCGTTTGCGAAAC

Downstream 100 bases:

>100_bases
GAGGTAGCACATGACGGATAACGCTCAGCAGGAAACCACGGCCGCGGAATCGCCTTCGTCGAAGAAGCGCTGGTATGTGG
TGCATGCCTACTCCGGTATG

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MANPNVETVGASSGKWLLGVAVLLVVAGVIGFYALAQQPSYVRGAALFAGIAAGVVVALLSAPGKDFVGFARESYREVRK
VVWPTRKEAGQMTGLVFVFVVIMALFLWSADKLIEWVIFSLVLGWK

Sequences:

>Translated_126_residues
MANPNVETVGASSGKWLLGVAVLLVVAGVIGFYALAQQPSYVRGAALFAGIAAGVVVALLSAPGKDFVGFARESYREVRK
VVWPTRKEAGQMTGLVFVFVVIMALFLWSADKLIEWVIFSLVLGWK
>Mature_125_residues
ANPNVETVGASSGKWLLGVAVLLVVAGVIGFYALAQQPSYVRGAALFAGIAAGVVVALLSAPGKDFVGFARESYREVRKV
VWPTRKEAGQMTGLVFVFVVIMALFLWSADKLIEWVIFSLVLGWK

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=73, Percent_Identity=45.2054794520548, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 13531; Mature: 13400

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANPNVETVGASSGKWLLGVAVLLVVAGVIGFYALAQQPSYVRGAALFAGIAAGVVVALL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SAPGKDFVGFARESYREVRKVVWPTRKEAGQMTGLVFVFVVIMALFLWSADKLIEWVIFS
HCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
LVLGWK
HHHCCC
>Mature Secondary Structure 
ANPNVETVGASSGKWLLGVAVLLVVAGVIGFYALAQQPSYVRGAALFAGIAAGVVVALL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SAPGKDFVGFARESYREVRKVVWPTRKEAGQMTGLVFVFVVIMALFLWSADKLIEWVIFS
HCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
LVLGWK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]