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The map label for this gene is cyaY

Identifier: 94312206

GI number: 94312206

Start: 3550528

End: 3550863

Strand: Reverse

Name: cyaY

Synonym: Rmet_3275

Alternate gene names: 94312206

Gene position: 3550863-3550528 (Counterclockwise)

Preceding gene: 94312208

Following gene: 94312204

Centisome position: 90.4

GC content: 62.5

Gene sequence:

>336_bases
ATGCCCCCCCTCAGTGAAAGCGAGTTCCTGGCGCTGGCCAGCAAGGCACTGGACCAGCTGGAAGCGGCGATCGAAGCCGC
CGCCGATGCGGCAGACGCCGACGTGGAAATCAATCGGACCGGCAACGTGATGGAACTCGAGTTCGAGGACGGCTCCAAGA
TCATCGTCAACAGCCAGGCGCCCATGCAGGAACTGTGGGTGGCAGCCAAGGCCGGTGGCTTCCATTTCCGTAACGATGGC
AGCAAATGGGTCGATACGCGGGGCGGTGGCGAACTGTATGCCGCGCTGTCCGGGTACATGAGCCAGCAGGCAGGGGTCAC
CTTGACGCTGAAGTAA

Upstream 100 bases:

>100_bases
GGATGGCTGCGGGAAGCGCAAGGTTTCCCGACTTTTCCATCAATTGATGCCGGCCCGAGTGCCCATTCCGAACGGGGCGC
CGGCGGCCTTGGAGTGTAGC

Downstream 100 bases:

>100_bases
GCGTTCTGGCACGCCACGCCGAAACGAAAAAACCGGCCGCGAGGGCCGGTTTTTCGTTGGAGGCGGTGCCGGTCAGGCTC
CGCCGAACATTTCCAGGATC

Product: frataxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MPPLSESEFLALASKALDQLEAAIEAAADAADADVEINRTGNVMELEFEDGSKIIVNSQAPMQELWVAAKAGGFHFRNDG
SKWVDTRGGGELYAALSGYMSQQAGVTLTLK

Sequences:

>Translated_111_residues
MPPLSESEFLALASKALDQLEAAIEAAADAADADVEINRTGNVMELEFEDGSKIIVNSQAPMQELWVAAKAGGFHFRNDG
SKWVDTRGGGELYAALSGYMSQQAGVTLTLK
>Mature_110_residues
PPLSESEFLALASKALDQLEAAIEAAADAADADVEINRTGNVMELEFEDGSKIIVNSQAPMQELWVAAKAGGFHFRNDGS
KWVDTRGGGELYAALSGYMSQQAGVTLTLK

Specific function: Not Known; Its Knock Out Does Not Affect Cellular Iron Content. [C]

COG id: COG1965

COG function: function code P; Protein implicated in iron transport, frataxin homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frataxin family

Homologues:

Organism=Escherichia coli, GI1790239, Length=108, Percent_Identity=37.037037037037, Blast_Score=78, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYAY_RALME (Q1LI79)

Other databases:

- EMBL:   CP000352
- RefSeq:   YP_585416.1
- ProteinModelPortal:   Q1LI79
- SMR:   Q1LI79
- STRING:   Q1LI79
- GeneID:   4040110
- GenomeReviews:   CP000352_GR
- KEGG:   rme:Rmet_3275
- eggNOG:   COG1965
- HOGENOM:   HBG687517
- OMA:   GGFHFRR
- PhylomeDB:   Q1LI79
- ProtClustDB:   PRK00446
- BioCyc:   RMET266264:RMET_3275-MONOMER
- HAMAP:   MF_00142
- InterPro:   IPR002908
- InterPro:   IPR020895
- Gene3D:   G3DSA:3.30.920.10
- TIGRFAMs:   TIGR03421

Pfam domain/function: PF01491 Frataxin_Cyay; SSF55387 Frataxin_like

EC number: NA

Molecular weight: Translated: 11805; Mature: 11674

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS01344 FRATAXIN_1; PS50810 FRATAXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLSESEFLALASKALDQLEAAIEAAADAADADVEINRTGNVMELEFEDGSKIIVNSQA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCEEEEECCC
PMQELWVAAKAGGFHFRNDGSKWVDTRGGGELYAALSGYMSQQAGVTLTLK
CHHHHHHHHCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
PPLSESEFLALASKALDQLEAAIEAAADAADADVEINRTGNVMELEFEDGSKIIVNSQA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCEEEEECCC
PMQELWVAAKAGGFHFRNDGSKWVDTRGGGELYAALSGYMSQQAGVTLTLK
CHHHHHHHHCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA