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The map label for this gene is pilN

Identifier: 94312202

GI number: 94312202

Start: 3545875

End: 3546519

Strand: Reverse

Name: pilN

Synonym: Rmet_3271

Alternate gene names: NA

Gene position: 3546519-3545875 (Counterclockwise)

Preceding gene: 94312203

Following gene: 94312201

Centisome position: 90.29

GC content: 62.64

Gene sequence:

>645_bases
ATGTCCACGACGACGAATTCCATTCCGTCGGTCAACCTGCTGCCGTATCACGAGGCGCGCAAGGCGGCCCGGCGGAAGAA
GGTCTACACGATGCTGGGCGGAGCAGCGGGCGCGGGGGCGCTCGTGGTTCTGATCGGCGGCTTCTATATCGACTCGCAGA
TCGATGCCGTCGCGGCACGCAATCAGGTGCTGAAGACGGAAAACGCCAGCATGGATGCGACGATCAGCAGGGTCAACTCG
CTGAAGAAGGACATCGAGGCACTGCTGGATCGCCAACGCGCGATCGAGAGCCTGCAGGCGCAGCGAAACCTGCCCGTGCA
ACTGCTCGAGGAACTTGTGCGTCAGGTGCCGGAAGGCGTCTACCTGTCCAGCCTCAAGCAGACCGGTGACAAGTTCGTGA
TGTCTGGCGTGGCGCAGTCCAACGAGCGGGTGTCCGAGCTGTTGCGCAACATCAGCCAGGTGACCTGGCTCGACCAGGCG
GATCTGGTGGAGTCCAAGGCCATCAACATGACCAACAACCTGCGCGAACAGCGCCGGTTGTTCGAATTCTCGATGCGCTT
TTCCTATCGCGCGCCGGAAGTCCCGGGCGACAAGAAAAAGGGCGCCTCCGACGCCGCGGGCACGCCCGCTGGTCGAAAGG
TCTGA

Upstream 100 bases:

>100_bases
GCAAGGTCAACGAGCGCTATCTCCAGCGTGACCTGCCTGCGTACATCGTCAGTGCGGGACTGGCGCTGCGCGGTTTGCAA
TAACCCACCGGGGGGCAAGC

Downstream 100 bases:

>100_bases
TCATGGCGCTCAATACCGAAATCTCCCTGCAGGACCTGACCGCGCAGTTCCGTGGCCTGAACCTGAACGAGCCGGAGACC
TGGCCGACGGCGCCGCGCGT

Product: tfp pilus assembly protein PilN

Products: NA

Alternate protein names: Fimbrial Assembly; Type IV Pilus Biogenesis Protein PilN; Type 4 Fimbrial Biogenesis Protein PilN; Tfp Pilus Assembly Protein PilN; Fimbrial Assembly Protein; Type IV Pilus Assembly Protein PilN; Fimbrial Assembly Protein PilN; Periplasmic Sensor Signal Transduction Histidine Kinase; Tfp Pilus Assembly Protein; PilN Type IV Pilus Assembly Protein; Type IV Pilus Protein PilN; Type IV Pilus Biogenesis Fimbrial Assembly; Fimbrial Assembly Membrane Protein; LOW QUALITY PROTEIN Tfp Pilus Assembly Protein PilN; Type IV Fimbrial Biogenesis Protein PilN; Fimbriae Biogenesis-Like Protein; Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Biogenesis PilN; Type IV Pilus Assembly Protein Piln; Fimbrial Type-4 Assembly Transmembrane Protein

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSTTTNSIPSVNLLPYHEARKAARRKKVYTMLGGAAGAGALVVLIGGFYIDSQIDAVAARNQVLKTENASMDATISRVNS
LKKDIEALLDRQRAIESLQAQRNLPVQLLEELVRQVPEGVYLSSLKQTGDKFVMSGVAQSNERVSELLRNISQVTWLDQA
DLVESKAINMTNNLREQRRLFEFSMRFSYRAPEVPGDKKKGASDAAGTPAGRKV

Sequences:

>Translated_214_residues
MSTTTNSIPSVNLLPYHEARKAARRKKVYTMLGGAAGAGALVVLIGGFYIDSQIDAVAARNQVLKTENASMDATISRVNS
LKKDIEALLDRQRAIESLQAQRNLPVQLLEELVRQVPEGVYLSSLKQTGDKFVMSGVAQSNERVSELLRNISQVTWLDQA
DLVESKAINMTNNLREQRRLFEFSMRFSYRAPEVPGDKKKGASDAAGTPAGRKV
>Mature_213_residues
STTTNSIPSVNLLPYHEARKAARRKKVYTMLGGAAGAGALVVLIGGFYIDSQIDAVAARNQVLKTENASMDATISRVNSL
KKDIEALLDRQRAIESLQAQRNLPVQLLEELVRQVPEGVYLSSLKQTGDKFVMSGVAQSNERVSELLRNISQVTWLDQAD
LVESKAINMTNNLREQRRLFEFSMRFSYRAPEVPGDKKKGASDAAGTPAGRKV

Specific function: Unknown

COG id: COG3166

COG function: function code NU; Tfp pilus assembly protein PilN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23551; Mature: 23420

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTTNSIPSVNLLPYHEARKAARRKKVYTMLGGAAGAGALVVLIGGFYIDSQIDAVAAR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NQVLKTENASMDATISRVNSLKKDIEALLDRQRAIESLQAQRNLPVQLLEELVRQVPEGV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
YLSSLKQTGDKFVMSGVAQSNERVSELLRNISQVTWLDQADLVESKAINMTNNLREQRRL
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
FEFSMRFSYRAPEVPGDKKKGASDAAGTPAGRKV
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STTTNSIPSVNLLPYHEARKAARRKKVYTMLGGAAGAGALVVLIGGFYIDSQIDAVAAR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NQVLKTENASMDATISRVNSLKKDIEALLDRQRAIESLQAQRNLPVQLLEELVRQVPEGV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
YLSSLKQTGDKFVMSGVAQSNERVSELLRNISQVTWLDQADLVESKAINMTNNLREQRRL
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
FEFSMRFSYRAPEVPGDKKKGASDAAGTPAGRKV
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA