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The map label for this gene is yadH [H]

Identifier: 94312183

GI number: 94312183

Start: 3523695

End: 3524516

Strand: Reverse

Name: yadH [H]

Synonym: Rmet_3252

Alternate gene names: 94312183

Gene position: 3524516-3523695 (Counterclockwise)

Preceding gene: 94312184

Following gene: 94312182

Centisome position: 89.73

GC content: 62.53

Gene sequence:

>822_bases
ATGAAGAACCCGGCTGAAATCGACGTTGCCGACCAGCAGCGCCTGGAGTCGATGGCCGTGGGTGGCCTGATCGGCTTCCG
CACGTTGCTCTACAAGGAGGTGCTGCGTTTCTGGAAGGTGTCCTTCCAGACCGTGGCCGCGCCGGTCCTGACCGCTGTGC
TGTACCTGTTGATCTTTGGTCACGTGCTGGAAGACCGCGTGCGCGTCTACGACCAGATCAGCTATACCGCGTTCCTGGTG
CCGGGCCTGGTAATGATGAGCGTGCTGCAGAATGCGTTCGCGAACAGCTCGTCGTCGCTGATCCAGTCAAAGATCACGGG
CAACCTGGTGTTCATCCTGCTGCCGCCGCTGTCGCACTGGGAAATGTTTGGCGCCTACGTGGTGGCGTCGATCATCCGTG
GGCTCTGCGTCGGCCTGGGCGTGCTGCTGGTGACCGCCTGGTTCGCCAACCTGCATTTCGCCCATATCGGCTGGATCCTG
GTGTTCGGCCTGATGGGCGCGGGCATTCTCGGCACGCTGGGCCTGATCGCCGGCATCTGGGCCGAAAAATTCGACCAGCT
GGCCGCGTTTCAGAACTTCCTGATCATGCCCGCGACGTTCCTGTCCGGCGTCTTCTATTCCATACATTCGCTGCCGGCGT
TCTGGCAGGCTGTGTCCCACGCGAACCCGTTCTTCTACATGATCGACGGCTTCCGCTACGGCTTCTTTGGCGTGTCGGAC
GTGCCGCCGCTGCAGAGCCTGGCCGTCGTGGTCGTGGCCTTCGTGGTGCTGGCGGCGCTGGCGCTGCGGCTGCTGCGCAA
CGGATACAAGCTACGGTACTGA

Upstream 100 bases:

>100_bases
AAATCAGCAAGGCCGACCTCGAGGACGTGTTCGTCCAGATCATGCGCCGCGAAGGCCAGATGCCGGGCGCCCTGCCCAAT
ACCGCGATGGAGGCTGCGGC

Downstream 100 bases:

>100_bases
TGTGCCGCCCTAACGGATTCAACCAGAGATAGACATGCTGCCAACACCGGAACAAGTCAGGGATTACATTGCCCAAGGAT
TGCCCTGCGAACATCTGGAA

Product: putative ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKNPAEIDVADQQRLESMAVGGLIGFRTLLYKEVLRFWKVSFQTVAAPVLTAVLYLLIFGHVLEDRVRVYDQISYTAFLV
PGLVMMSVLQNAFANSSSSLIQSKITGNLVFILLPPLSHWEMFGAYVVASIIRGLCVGLGVLLVTAWFANLHFAHIGWIL
VFGLMGAGILGTLGLIAGIWAEKFDQLAAFQNFLIMPATFLSGVFYSIHSLPAFWQAVSHANPFFYMIDGFRYGFFGVSD
VPPLQSLAVVVVAFVVLAALALRLLRNGYKLRY

Sequences:

>Translated_273_residues
MKNPAEIDVADQQRLESMAVGGLIGFRTLLYKEVLRFWKVSFQTVAAPVLTAVLYLLIFGHVLEDRVRVYDQISYTAFLV
PGLVMMSVLQNAFANSSSSLIQSKITGNLVFILLPPLSHWEMFGAYVVASIIRGLCVGLGVLLVTAWFANLHFAHIGWIL
VFGLMGAGILGTLGLIAGIWAEKFDQLAAFQNFLIMPATFLSGVFYSIHSLPAFWQAVSHANPFFYMIDGFRYGFFGVSD
VPPLQSLAVVVVAFVVLAALALRLLRNGYKLRY
>Mature_273_residues
MKNPAEIDVADQQRLESMAVGGLIGFRTLLYKEVLRFWKVSFQTVAAPVLTAVLYLLIFGHVLEDRVRVYDQISYTAFLV
PGLVMMSVLQNAFANSSSSLIQSKITGNLVFILLPPLSHWEMFGAYVVASIIRGLCVGLGVLLVTAWFANLHFAHIGWIL
VFGLMGAGILGTLGLIAGIWAEKFDQLAAFQNFLIMPATFLSGVFYSIHSLPAFWQAVSHANPFFYMIDGFRYGFFGVSD
VPPLQSLAVVVVAFVVLAALALRLLRNGYKLRY

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=251, Percent_Identity=38.2470119521912, Blast_Score=170, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 30163; Mature: 30163

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]