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The map label for this gene is petC [H]

Identifier: 94312159

GI number: 94312159

Start: 3504395

End: 3505138

Strand: Reverse

Name: petC [H]

Synonym: Rmet_3228

Alternate gene names: 94312159

Gene position: 3505138-3504395 (Counterclockwise)

Preceding gene: 94312160

Following gene: 94312158

Centisome position: 89.23

GC content: 61.83

Gene sequence:

>744_bases
ATGAAAAAGTTGCTTTCGATCTTCGCACTGGTCGGCGCTTGTTTCGCGGCAATGCCCGCGATGGCTTCAGAAGGGGGCTT
CCCGCTGGAGCCGGCGCCGCTGGACACGAGCGATGTGTCATCGCTGCAGCGCGGTGCCAAGCTGTTCGTCAACTACTGCC
TGAATTGCCACGGCGCGTCGATGATGCGCTACAACCGGCTCAAGGGCCTGGACCTTACCGACGAACAGATCCAGCAGAAC
CTGCTGTTCTCGGCGGGCAAGGTGGGCGAAACGATGACAATCGCGATGCACCCGAAGGACGCCAAGGCATTCTTCGGCGC
GATTCCCCCGGACCTGTCGGTCATCGCCCGCGCTCGCGGCAACGACTGGCTCTACACGTACCTGCGCACGTTCTACCGTG
ATGACACCCGCGCCACGGGCTGGAACAACCTGGTCTTCCCGAGCGTCGGCATGCCGCACGTGCTGTGGGAACTGCAGGGC
CAGCGCGCCGCCAAGTTCGCGGAAGCCGAGGAACACGGCGAGAAGGTGCACAAGTTCACAGGTTTCGAGCAGATCACCCC
GGGCAAGCTGAGCTCGCAGGAATATGACCAGGCCGCAGCCGATCTGGTGAACTACCTGAACTGGATGGCCGAGCCGGAAC
AAAGCCATCGCAAGCGTCTGGGCGTGTGGGTGCTCCTGTTCCTGGGCATGTTCACCGTGTTTGCCTGGCGCCTGAATGCC
GCTTACTGGAAAGATGTGAGGTAA

Upstream 100 bases:

>100_bases
CTGTGGAGCCGTGCCGGCACGTTCAAGCCGGTGCCGGAGCGCGTCACGTTCCATCCGCACTAAGACGCTGCGCGACCCTA
CAAGAGGACAAGGACACAAG

Downstream 100 bases:

>100_bases
GCCTGTGTGGCTTGTCAGGCTGGTTGTAACAGCCTGGCGGTGCCCGCCGAAGGGCCGGCGCGGAGGTTGCAGCAGTGCAG
CACCGCGTCGGCCCTTTTGT

Product: cytochrome c1 (transmembrane protein)

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKKLLSIFALVGACFAAMPAMASEGGFPLEPAPLDTSDVSSLQRGAKLFVNYCLNCHGASMMRYNRLKGLDLTDEQIQQN
LLFSAGKVGETMTIAMHPKDAKAFFGAIPPDLSVIARARGNDWLYTYLRTFYRDDTRATGWNNLVFPSVGMPHVLWELQG
QRAAKFAEAEEHGEKVHKFTGFEQITPGKLSSQEYDQAAADLVNYLNWMAEPEQSHRKRLGVWVLLFLGMFTVFAWRLNA
AYWKDVR

Sequences:

>Translated_247_residues
MKKLLSIFALVGACFAAMPAMASEGGFPLEPAPLDTSDVSSLQRGAKLFVNYCLNCHGASMMRYNRLKGLDLTDEQIQQN
LLFSAGKVGETMTIAMHPKDAKAFFGAIPPDLSVIARARGNDWLYTYLRTFYRDDTRATGWNNLVFPSVGMPHVLWELQG
QRAAKFAEAEEHGEKVHKFTGFEQITPGKLSSQEYDQAAADLVNYLNWMAEPEQSHRKRLGVWVLLFLGMFTVFAWRLNA
AYWKDVR
>Mature_247_residues
MKKLLSIFALVGACFAAMPAMASEGGFPLEPAPLDTSDVSSLQRGAKLFVNYCLNCHGASMMRYNRLKGLDLTDEQIQQN
LLFSAGKVGETMTIAMHPKDAKAFFGAIPPDLSVIARARGNDWLYTYLRTFYRDDTRATGWNNLVFPSVGMPHVLWELQG
QRAAKFAEAEEHGEKVHKFTGFEQITPGKLSSQEYDQAAADLVNYLNWMAEPEQSHRKRLGVWVLLFLGMFTVFAWRLNA
AYWKDVR

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 27822; Mature: 27822

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCC
>Mature Secondary Structure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HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA