Click here to switch to the map view.

The map label for this gene is norR [H]

Identifier: 94312097

GI number: 94312097

Start: 3437068

End: 3438645

Strand: Reverse

Name: norR [H]

Synonym: Rmet_3166

Alternate gene names: 94312097

Gene position: 3438645-3437068 (Counterclockwise)

Preceding gene: 335055653

Following gene: 94312093

Centisome position: 87.54

GC content: 68.5

Gene sequence:

>1578_bases
ATGATCAGCGATGTGCTTCTTGCGGATCTTTGCGCCGACTTTCCCCAGGCCGTGCGGCTGCAGCGCCTGGTAGGGTGCTT
ACGCTCGCATTTCCACTGCGGAGCGGTGGCGATCCTGCGCCTGGAGGAGGACCATCTGCGTCCGATCGCGGTGGATGGGT
TGGTGCGCGATGCCCTTGGGCGGCGGTTCTCCGTGGGCCTTCATCCCCGGCTTGCGGCGATCCTGGCGCGGCGCGGCGTC
ACATGCTTCCACCATGACAGTGCGTTGCCCGATCCGTACGACGGGTTGATCGACGAGCACGTGGGCGAGCCGCTGCCCGT
CCACGACTGCATGGGCATCAGTCTCCAGAGCGAAGGCAAGCCATGGGGCGTGGTGACGCTGGACGCCCTGGAAGTCGGGA
CGTTTACCGCCTCGGCCCAAGAGGAACTGGGCCAGCTGACGGCGCTGATCGAGGCATCGATACGCACCTCGAGGCTGGAA
GGCGAGATCCGCGCGCTACGCATGGGCCGCGCGGTGGGCGCAGCCGGGGAGACGGTGCGCGACGATGGCGAGGTCATCGG
CGAAATCATCGGAGAGAGCGAGGCGATCGCGCAGCTCATGCACGAGATCGGCGTGGTGGCGGATTCTGAACTGCCGGTGC
TGCTGCTCGGCGAGACCGGCGTTGGCAAGGAGTTGTTCGCGCACCGGCTGCACCGGCTGTCACGCCGCCGGGACCGCCCG
CTGATTCACGTGAACTGCGCCGCACTGCCTGAATCCCTGGCCGAAAGCGAACTGTTCGGCCATGTGCGCGGCGCCTTCAC
GGGGGCGACGGGCGAGCGCCCTGGGCGCTTCGAGGCCGCCGACGGTGGCACGCTGTTCCTCGACGAGGTGGGCGAGCTGC
CGCTGGCCATCCAGGCCAAGCTGCTCCGCACGCTGCAGAACGGCGAGATCCAGCGTCTGGGGTCCGATCGGCCGCGCCGC
GTAGACGTGCGCGTGATCGCGGCGACCAACCGCAACCTGCGCGAGCATGTGCGCGACGGCTCGTTCCGCGCCGACCTGTA
TCACCGGCTCTCGGTCTATCCCATTCCGATTCCGCCGCTGCGCGAGCGCGGCAATGACGTGCTGCTGTTGGCGGGACGAT
TCCTGGAACTCAACCGGGCGCGGCTGGGCCTGCGCAGCCTGCGCCTGTCCGTCGCGGCGCAGGATGCGCTACGTCGATAC
ACGTGGCCGGGCAACGTGCGCGAGCTGGAGCATGTGATCAGCCGGGCCGCGCTGAAGCTGCTCAGCCGGGGCGCCAGCCG
CAAGGACATCATTACGCTCGACACCGATTTGCTGGATCTGGATGGGGTTGTCGCGCCAGCCGATGCGGCCGCCGATGCAG
CGCCGTTTATGTCGGCGCCGGCCACCAGCTTGCGCGAGGCGGTGGAGGCCTGCCAGAGCCGGTGCATCGAGCAGGCCCTG
GAGGCCCAGAGCGGGAATTGGGCCCAGGCCGCGCGGCAGCTTGGCATGGATGCTAGCAATCTGCACAAGCTGGCCCGCCG
GCTCGGCGTCAAGCGCGACGAGCCAGGCGGCAGCAAGAGTGCGGCAAGAACGCGCTAG

Upstream 100 bases:

>100_bases
CTGATAAGAGTCCTAAAAGATTCAACAGGTTGGCGTCGGGCGCGGTAATATTCACCGTGGCCGTTTAGGGTGTTTTTGAC
TATCTAGGGTTGTTTTGACC

Downstream 100 bases:

>100_bases
GACGCATTAGCCGCGGCAGCACGTACTAGCGCGGACGAAGGTCGACGATGCGCCGGGCCTTGCCGACGGAGCGCTCGACA
CCGCCTTCGGCAAGAATCTC

Product: anaerobic nitric oxide reductase transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MISDVLLADLCADFPQAVRLQRLVGCLRSHFHCGAVAILRLEEDHLRPIAVDGLVRDALGRRFSVGLHPRLAAILARRGV
TCFHHDSALPDPYDGLIDEHVGEPLPVHDCMGISLQSEGKPWGVVTLDALEVGTFTASAQEELGQLTALIEASIRTSRLE
GEIRALRMGRAVGAAGETVRDDGEVIGEIIGESEAIAQLMHEIGVVADSELPVLLLGETGVGKELFAHRLHRLSRRRDRP
LIHVNCAALPESLAESELFGHVRGAFTGATGERPGRFEAADGGTLFLDEVGELPLAIQAKLLRTLQNGEIQRLGSDRPRR
VDVRVIAATNRNLREHVRDGSFRADLYHRLSVYPIPIPPLRERGNDVLLLAGRFLELNRARLGLRSLRLSVAAQDALRRY
TWPGNVRELEHVISRAALKLLSRGASRKDIITLDTDLLDLDGVVAPADAAADAAPFMSAPATSLREAVEACQSRCIEQAL
EAQSGNWAQAARQLGMDASNLHKLARRLGVKRDEPGGSKSAARTR

Sequences:

>Translated_525_residues
MISDVLLADLCADFPQAVRLQRLVGCLRSHFHCGAVAILRLEEDHLRPIAVDGLVRDALGRRFSVGLHPRLAAILARRGV
TCFHHDSALPDPYDGLIDEHVGEPLPVHDCMGISLQSEGKPWGVVTLDALEVGTFTASAQEELGQLTALIEASIRTSRLE
GEIRALRMGRAVGAAGETVRDDGEVIGEIIGESEAIAQLMHEIGVVADSELPVLLLGETGVGKELFAHRLHRLSRRRDRP
LIHVNCAALPESLAESELFGHVRGAFTGATGERPGRFEAADGGTLFLDEVGELPLAIQAKLLRTLQNGEIQRLGSDRPRR
VDVRVIAATNRNLREHVRDGSFRADLYHRLSVYPIPIPPLRERGNDVLLLAGRFLELNRARLGLRSLRLSVAAQDALRRY
TWPGNVRELEHVISRAALKLLSRGASRKDIITLDTDLLDLDGVVAPADAAADAAPFMSAPATSLREAVEACQSRCIEQAL
EAQSGNWAQAARQLGMDASNLHKLARRLGVKRDEPGGSKSAARTR
>Mature_525_residues
MISDVLLADLCADFPQAVRLQRLVGCLRSHFHCGAVAILRLEEDHLRPIAVDGLVRDALGRRFSVGLHPRLAAILARRGV
TCFHHDSALPDPYDGLIDEHVGEPLPVHDCMGISLQSEGKPWGVVTLDALEVGTFTASAQEELGQLTALIEASIRTSRLE
GEIRALRMGRAVGAAGETVRDDGEVIGEIIGESEAIAQLMHEIGVVADSELPVLLLGETGVGKELFAHRLHRLSRRRDRP
LIHVNCAALPESLAESELFGHVRGAFTGATGERPGRFEAADGGTLFLDEVGELPLAIQAKLLRTLQNGEIQRLGSDRPRR
VDVRVIAATNRNLREHVRDGSFRADLYHRLSVYPIPIPPLRERGNDVLLLAGRFLELNRARLGLRSLRLSVAAQDALRRY
TWPGNVRELEHVISRAALKLLSRGASRKDIITLDTDLLDLDGVVAPADAAADAAPFMSAPATSLREAVEACQSRCIEQAL
EAQSGNWAQAARQLGMDASNLHKLARRLGVKRDEPGGSKSAARTR

Specific function: Required for the nitric oxide (NO) induced expression of NO reductase. Not required for expression of 2 other pathway members, nitrate reductase (nirS) and nitrous oxide reductase (nosZ) [H]

COG id: COG3604

COG function: function code KT; Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI87082152, Length=493, Percent_Identity=49.4929006085193, Blast_Score=417, Evalue=1e-118,
Organism=Escherichia coli, GI1789087, Length=426, Percent_Identity=39.2018779342723, Blast_Score=257, Evalue=2e-69,
Organism=Escherichia coli, GI87082117, Length=249, Percent_Identity=53.8152610441767, Blast_Score=254, Evalue=1e-68,
Organism=Escherichia coli, GI1790437, Length=321, Percent_Identity=43.613707165109, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI1788550, Length=389, Percent_Identity=37.7892030848329, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI1790299, Length=332, Percent_Identity=41.8674698795181, Blast_Score=231, Evalue=6e-62,
Organism=Escherichia coli, GI1789233, Length=326, Percent_Identity=39.5705521472393, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI87081872, Length=333, Percent_Identity=39.039039039039, Blast_Score=218, Evalue=1e-57,
Organism=Escherichia coli, GI1788905, Length=319, Percent_Identity=38.5579937304075, Blast_Score=209, Evalue=4e-55,
Organism=Escherichia coli, GI1786524, Length=332, Percent_Identity=39.7590361445783, Blast_Score=205, Evalue=7e-54,
Organism=Escherichia coli, GI1787583, Length=272, Percent_Identity=38.6029411764706, Blast_Score=186, Evalue=4e-48,
Organism=Escherichia coli, GI1789828, Length=230, Percent_Identity=39.5652173913043, Blast_Score=141, Evalue=8e-35,
Organism=Escherichia coli, GI87081858, Length=220, Percent_Identity=37.2727272727273, Blast_Score=116, Evalue=4e-27,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003018
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 57122; Mature: 57122

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00675 SIGMA54_INTERACT_1 ; PS00676 SIGMA54_INTERACT_2 ; PS00688 SIGMA54_INTERACT_3 ; PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISDVLLADLCADFPQAVRLQRLVGCLRSHFHCGAVAILRLEEDHLRPIAVDGLVRDALG
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCEEHHHHHHHHHHC
RRFSVGLHPRLAAILARRGVTCFHHDSALPDPYDGLIDEHVGEPLPVHDCMGISLQSEGK
CEEECCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCHHHHCCCEECCCCC
PWGVVTLDALEVGTFTASAQEELGQLTALIEASIRTSRLEGEIRALRMGRAVGAAGETVR
CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DDGEVIGEIIGESEAIAQLMHEIGVVADSELPVLLLGETGVGKELFAHRLHRLSRRRDRP
CHHHHHHHHHCCHHHHHHHHHHHCCEECCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC
LIHVNCAALPESLAESELFGHVRGAFTGATGERPGRFEAADGGTLFLDEVGELPLAIQAK
EEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEHHHHCCCCHHHHHH
LLRTLQNGEIQRLGSDRPRRVDVRVIAATNRNLREHVRDGSFRADLYHRLSVYPIPIPPL
HHHHHHCCCHHHCCCCCCCEEEEEEEEECCCHHHHHHCCCCHHHHHHHHCEEECCCCCHH
RERGNDVLLLAGRFLELNRARLGLRSLRLSVAAQDALRRYTWPGNVRELEHVISRAALKL
HHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LSRGASRKDIITLDTDLLDLDGVVAPADAAADAAPFMSAPATSLREAVEACQSRCIEQAL
HHCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EAQSGNWAQAARQLGMDASNLHKLARRLGVKRDEPGGSKSAARTR
HCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MISDVLLADLCADFPQAVRLQRLVGCLRSHFHCGAVAILRLEEDHLRPIAVDGLVRDALG
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCEEHHHHHHHHHHC
RRFSVGLHPRLAAILARRGVTCFHHDSALPDPYDGLIDEHVGEPLPVHDCMGISLQSEGK
CEEECCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCHHHHCCCEECCCCC
PWGVVTLDALEVGTFTASAQEELGQLTALIEASIRTSRLEGEIRALRMGRAVGAAGETVR
CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DDGEVIGEIIGESEAIAQLMHEIGVVADSELPVLLLGETGVGKELFAHRLHRLSRRRDRP
CHHHHHHHHHCCHHHHHHHHHHHCCEECCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC
LIHVNCAALPESLAESELFGHVRGAFTGATGERPGRFEAADGGTLFLDEVGELPLAIQAK
EEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEHHHHCCCCHHHHHH
LLRTLQNGEIQRLGSDRPRRVDVRVIAATNRNLREHVRDGSFRADLYHRLSVYPIPIPPL
HHHHHHCCCHHHCCCCCCCEEEEEEEEECCCHHHHHHCCCCHHHHHHHHCEEECCCCCHH
RERGNDVLLLAGRFLELNRARLGLRSLRLSVAAQDALRRYTWPGNVRELEHVISRAALKL
HHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LSRGASRKDIITLDTDLLDLDGVVAPADAAADAAPFMSAPATSLREAVEACQSRCIEQAL
HHCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EAQSGNWAQAARQLGMDASNLHKLARRLGVKRDEPGGSKSAARTR
HCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11069685 [H]