| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94312092
Identifier: 94312092
GI number: 94312092
Start: 3426390
End: 3427310
Strand: Reverse
Name: 94312092
Synonym: Rmet_3161
Alternate gene names: NA
Gene position: 3427310-3426390 (Counterclockwise)
Preceding gene: 335055651
Following gene: 94312089
Centisome position: 87.25
GC content: 60.15
Gene sequence:
>921_bases ATGGCCAAGAAGTTTGGGCCAGCGCTCACGATGATCGTGGGTGCATTGATGCTGACAGGCTGCGCATCAACATCAAGACA GACAATCGATCCATCGAAACTGGCTGCCGTCTCTGACGGCAATTGCAAGGCGTTCGCCGCAAAAAGCCGTCCGATGGATG CAAATTCAGGCGTAGTTCCGGATTCGCTCGAATTGGCAAATCTTGCCAGCGAGAGTGCTGCAGATGCCGAAGGCGGGGCT GACGTCGATTCCGAGCCTACGCCGCCGCCGGCGCTCTCCCAACTTCCACCGTTCTCGGCCTCCAATATGGCCAGCCCGAT GCCCGTCGGGTGGCGTCCCTGGAAGATCAACCGCAACAAGACACCAACACGCTATGCGCTGACGGAAGTCGATCACCGTC TGGTGCTTCATGCAGAGGCTGACAGTTCCGCATCGGGGCTCTACGTGCCGCTGGTCGAGCGTGAGGCCGGCGCCTTGCGC TGGATGTGGAAAACGCGCGACGTCATCCGCACCGCCGATAATGGCGTCAGCCATCGGGAAGATTCGCCGCTGCGCATCTT CGTCGCCTTCGATGGCGATCGCTCCACGCTGCCGCTTCGTGATCAGTTGATGTACGAAATGGCTCGTATCACCACCGGTC GGGAAATGCCGTACGCCACGCTGATGTATATCTGGGGCGGGCGGCTGCCGCCAGGTGCGGTCGTGAATAATCCCCACACC GATCGCGTACGCATGATCATCGTCGACTCAGGTACGCGCCATACCGGCGAGTGGCGCTGCCATGAACGGGATCTGCGCGC AGATTATCGCAAGGCCTTCGGCGCCGATCCGGGGAAGGTGATCGCCGTCGGTCTCATGACCGACACCGACAATACCAAGA CCAGCGCGGAGTCTTGGTATGGCGATATCACCATCGAATAA
Upstream 100 bases:
>100_bases GCGAAGTAGTCCGCAACAGTAAAGCCGCGATCGACAGTGCCCATGTTTCACAAATTGGGCTCCTGAAGCGCCGGCAAGCA ATACGGGTACAGGGGGTTAC
Downstream 100 bases:
>100_bases CCAAAGTCAGCCGACAGCCGAATCCGTAAGGGCCAGAAGGGCGAACGTAGCCAGCCAATGGGTGGCTACGTAATGCCCTT CGACGGCTTGGGGCAGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MAKKFGPALTMIVGALMLTGCASTSRQTIDPSKLAAVSDGNCKAFAAKSRPMDANSGVVPDSLELANLASESAADAEGGA DVDSEPTPPPALSQLPPFSASNMASPMPVGWRPWKINRNKTPTRYALTEVDHRLVLHAEADSSASGLYVPLVEREAGALR WMWKTRDVIRTADNGVSHREDSPLRIFVAFDGDRSTLPLRDQLMYEMARITTGREMPYATLMYIWGGRLPPGAVVNNPHT DRVRMIIVDSGTRHTGEWRCHERDLRADYRKAFGADPGKVIAVGLMTDTDNTKTSAESWYGDITIE
Sequences:
>Translated_306_residues MAKKFGPALTMIVGALMLTGCASTSRQTIDPSKLAAVSDGNCKAFAAKSRPMDANSGVVPDSLELANLASESAADAEGGA DVDSEPTPPPALSQLPPFSASNMASPMPVGWRPWKINRNKTPTRYALTEVDHRLVLHAEADSSASGLYVPLVEREAGALR WMWKTRDVIRTADNGVSHREDSPLRIFVAFDGDRSTLPLRDQLMYEMARITTGREMPYATLMYIWGGRLPPGAVVNNPHT DRVRMIIVDSGTRHTGEWRCHERDLRADYRKAFGADPGKVIAVGLMTDTDNTKTSAESWYGDITIE >Mature_305_residues AKKFGPALTMIVGALMLTGCASTSRQTIDPSKLAAVSDGNCKAFAAKSRPMDANSGVVPDSLELANLASESAADAEGGAD VDSEPTPPPALSQLPPFSASNMASPMPVGWRPWKINRNKTPTRYALTEVDHRLVLHAEADSSASGLYVPLVEREAGALRW MWKTRDVIRTADNGVSHREDSPLRIFVAFDGDRSTLPLRDQLMYEMARITTGREMPYATLMYIWGGRLPPGAVVNNPHTD RVRMIIVDSGTRHTGEWRCHERDLRADYRKAFGADPGKVIAVGLMTDTDNTKTSAESWYGDITIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33403; Mature: 33272
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKFGPALTMIVGALMLTGCASTSRQTIDPSKLAAVSDGNCKAFAAKSRPMDANSGVVP CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCEEEEEECCCCCCCCCCCCC DSLELANLASESAADAEGGADVDSEPTPPPALSQLPPFSASNMASPMPVGWRPWKINRNK CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCC TPTRYALTEVDHRLVLHAEADSSASGLYVPLVEREAGALRWMWKTRDVIRTADNGVSHRE CCCEEEHEECCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHCCCCCCCCC DSPLRIFVAFDGDRSTLPLRDQLMYEMARITTGREMPYATLMYIWGGRLPPGAVVNNPHT CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEECCCCC DRVRMIIVDSGTRHTGEWRCHERDLRADYRKAFGADPGKVIAVGLMTDTDNTKTSAESWY CEEEEEEEECCCCCCCCCEECHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHCE GDITIE EEEEEC >Mature Secondary Structure AKKFGPALTMIVGALMLTGCASTSRQTIDPSKLAAVSDGNCKAFAAKSRPMDANSGVVP CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCEEEEEECCCCCCCCCCCCC DSLELANLASESAADAEGGADVDSEPTPPPALSQLPPFSASNMASPMPVGWRPWKINRNK CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCC TPTRYALTEVDHRLVLHAEADSSASGLYVPLVEREAGALRWMWKTRDVIRTADNGVSHRE CCCEEEHEECCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHCCCCCCCCC DSPLRIFVAFDGDRSTLPLRDQLMYEMARITTGREMPYATLMYIWGGRLPPGAVVNNPHT CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEECCCCC DRVRMIIVDSGTRHTGEWRCHERDLRADYRKAFGADPGKVIAVGLMTDTDNTKTSAESWY CEEEEEEEECCCCCCCCCEECHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHCE GDITIE EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA