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The map label for this gene is 94312002

Identifier: 94312002

GI number: 94312002

Start: 3327912

End: 3328517

Strand: Reverse

Name: 94312002

Synonym: Rmet_3071

Alternate gene names: NA

Gene position: 3328517-3327912 (Counterclockwise)

Preceding gene: 94312003

Following gene: 94311991

Centisome position: 84.74

GC content: 62.71

Gene sequence:

>606_bases
ATGGCAACTGCTGCAAAGAAAAAGCCGGCGGCTAAGAAGGCCGCCAAGCCGGCCGCCAAGAAGGCTGCTGTGAAGAAGGT
CGCCGCCAAGAAGGCTGCTCCGGCCGCCAAGAAGGCTGCTGCCAAGAAGGTCGCAACCAAGAAGGTAGCCGCCAAGAAGG
TAGCGACCAAGAAGGTAGCGACCAAGAAGGTAGCCGCCAAGAAGGCAGCACCGGCCAAGAAGGCTGCAGTGAAGAAGGTT
GCTGCCAAGAAGGTCGCAACCAAGAAGGTAGCCGCCAAGAAGGCAGCACCGGCCAAGAAGGCTGCAGTGAAGAAGGTTGC
TGCCAAGAAGCCGGCCGCCAAGAAGGTCGTCGCCAAGAAGGCAGCACCGGCCAAGAAGGCCGCAGCCAAGAAGGTAGCCG
CCAAGAAGCCGGCCGCCAAGAAGGCTGCTGCAAAGAAGCCGGCTGCCAAGAAGCCTGCTGCCAAGAAGGCTGCTGCGAAG
AAGCCTGCTGCCAAGAAGGCTGCTGCGAAGCCTGCCGCTGCTCCTGCTGTTGCCCCCGCGGCCGCAGCCAAGACCGCGCT
GAACCCGGCTGCAGCCTGGCCGTTCCCGACGGGCAACCGTCCGTAA

Upstream 100 bases:

>100_bases
GAATCGCTCGCTCGATTGGGGCACGTGCAAAACACGCCTCGGGTCGGTCGGGTCGCCAATTTAGGTCATTCGATATTTCA
CGTTAGTGAAGGAGTTATCC

Downstream 100 bases:

>100_bases
TCGCCTCGCACTCGTGCGAGCGATCACAACCGGGAATCGCCAGGGCACGCATCGCGTGCCGCACTGACCGGATACGGCGT
ATCCGGTCCGCAAGACGGCA

Product: histone H1-like protein HC2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MATAAKKKPAAKKAAKPAAKKAAVKKVAAKKAAPAAKKAAAKKVATKKVAAKKVATKKVATKKVAAKKAAPAKKAAVKKV
AAKKVATKKVAAKKAAPAKKAAVKKVAAKKPAAKKVVAKKAAPAKKAAAKKVAAKKPAAKKAAAKKPAAKKPAAKKAAAK
KPAAKKAAAKPAAAPAVAPAAAAKTALNPAAAWPFPTGNRP

Sequences:

>Translated_201_residues
MATAAKKKPAAKKAAKPAAKKAAVKKVAAKKAAPAAKKAAAKKVATKKVAAKKVATKKVATKKVAAKKAAPAKKAAVKKV
AAKKVATKKVAAKKAAPAKKAAVKKVAAKKPAAKKVVAKKAAPAKKAAAKKVAAKKPAAKKAAAKKPAAKKPAAKKAAAK
KPAAKKAAAKPAAAPAVAPAAAAKTALNPAAAWPFPTGNRP
>Mature_200_residues
ATAAKKKPAAKKAAKPAAKKAAVKKVAAKKAAPAAKKAAAKKVATKKVAAKKVATKKVATKKVAAKKAAPAKKAAVKKVA
AKKVATKKVAAKKAAPAKKAAVKKVAAKKPAAKKVVAKKAAPAKKAAAKKVAAKKPAAKKAAAKKPAAKKPAAKKAAAKK
PAAKKAAAKPAAAPAVAPAAAAKTALNPAAAWPFPTGNRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19679; Mature: 19548

Theoretical pI: Translated: 12.80; Mature: 12.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAAKKKPAAKKAAKPAAKKAAVKKVAAKKAAPAAKKAAAKKVATKKVAAKKVATKKVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKKVAAKKAAPAKKAAVKKVAAKKVATKKVAAKKAAPAKKAAVKKVAAKKPAAKKVVAKK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHH
AAPAKKAAAKKVAAKKPAAKKAAAKKPAAKKPAAKKAAAKKPAAKKAAAKPAAAPAVAPA
CCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCHHHHH
AAAKTALNPAAAWPFPTGNRP
HHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATAAKKKPAAKKAAKPAAKKAAVKKVAAKKAAPAAKKAAAKKVATKKVAAKKVATKKVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKKVAAKKAAPAKKAAVKKVAAKKVATKKVAAKKAAPAKKAAVKKVAAKKPAAKKVVAKK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHH
AAPAKKAAAKKVAAKKPAAKKAAAKKPAAKKPAAKKAAAKKPAAKKAAAKPAAAPAVAPA
CCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCHHHHH
AAAKTALNPAAAWPFPTGNRP
HHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA