| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is metF2
Identifier: 94311920
GI number: 94311920
Start: 3245626
End: 3246528
Strand: Reverse
Name: metF2
Synonym: Rmet_2988
Alternate gene names: NA
Gene position: 3246528-3245626 (Counterclockwise)
Preceding gene: 94311921
Following gene: 94311919
Centisome position: 82.65
GC content: 62.24
Gene sequence:
>903_bases ATGGCAAGCCCCTTGCTTCATTCCGACAAGTCCAAGCCCATCGGCAACATCACCGACGCCTATTCGTTAGAGGTCAACGC GAAGGATATCTCTGCGCTGACCGCAGCGGCGCCGCGTGTATTGCCCGGGTCAACCATTTCCATTCCCTACCTGGCGAACC AGGACAACGACGCGCGACTGGCCGCAGCGCAGGCCGTTCGCGGACTCGGCTTTGAGCCCATGCCTCACCTCGCTGCACGC CGTATCGCCTCGTTCGCAAAACTGGAGTCGTTCATCCAGCGCGCGGTCGCGGAAGCCGGCGTCAAGCGTTGCTTCGTGAT CGCTGGAGATCCGTCCACCCCGCTGGGGCCGTTTGCCGACAGCTCCTCACTGATCGAATCAGGCGTGTTCGAGCGCTCGG GCATTCAGATGGTCGGCGTGGGTGGCCATCCCGAGGGCCATCCGGTCATGAGCACATCTGATCGTTGGAAAGTGCTCGAA CACAAGTGTCGCTGCATCGAAGGGCGCGGCATGGCGCCCTTGATCGTCACGCAATTTGCCTTCGATGCCGACATCGTGCT GGCCTGGCTGGAAGCCCTGCGCGGGCGTGGCGTCGAACATCCCGTACGCGTGGGCGTGCCGGGCCCTGCAGGCGTGGCGG TGCTGGCGCGCTATGCCGCCTTGTGTGGCGTTAGCGCATGCGCGTCGATGTTGTCCAAGTACGGCATCTCGATCAGCAAG CTGTTCGGCATAGCAGGCCCGGATCTCTTTGTGGATCGTCTGACCACCCGCCTGACCGAAGCACATGGAAAGGTGAGCCT GCATTTCTTTCCATTCGGAGGCATCGCTCAGTCCGTGAAGTGGGTAGAGCAGTACTGCTCGCGTGCCGAGCCTGAACAAC CCATCGACACGGCTCCCATGTGA
Upstream 100 bases:
>100_bases AAAGATTGACGCGCCTTGCCGGGTGAGCGATGCCGCTCCATGGCTTCCAACCGACCCGATCAGCGCTGGCGGGTCGGAAC TCTCCCAACAGTCGCCAGAT
Downstream 100 bases:
>100_bases TTACTGCGCCTCCAGCAGTCGCTTGCACTGGCATGCCCCATAGAAGCAGACCTCGTTGGGGCGAACGCTTCGAGAGCATC CTACCGCCCGCCTCAGCCTT
Product: 5,10-methylenetetrahydrofolate reductase
Products: NA
Alternate protein names: 5 10-Methylenetetrahydrofolate Reductase; Metfprotein-Like; MetF-Like Protein; Methylenetetrahydrofolate Reductase Family Protein; Metfprotein -Like Protein
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MASPLLHSDKSKPIGNITDAYSLEVNAKDISALTAAAPRVLPGSTISIPYLANQDNDARLAAAQAVRGLGFEPMPHLAAR RIASFAKLESFIQRAVAEAGVKRCFVIAGDPSTPLGPFADSSSLIESGVFERSGIQMVGVGGHPEGHPVMSTSDRWKVLE HKCRCIEGRGMAPLIVTQFAFDADIVLAWLEALRGRGVEHPVRVGVPGPAGVAVLARYAALCGVSACASMLSKYGISISK LFGIAGPDLFVDRLTTRLTEAHGKVSLHFFPFGGIAQSVKWVEQYCSRAEPEQPIDTAPM
Sequences:
>Translated_300_residues MASPLLHSDKSKPIGNITDAYSLEVNAKDISALTAAAPRVLPGSTISIPYLANQDNDARLAAAQAVRGLGFEPMPHLAAR RIASFAKLESFIQRAVAEAGVKRCFVIAGDPSTPLGPFADSSSLIESGVFERSGIQMVGVGGHPEGHPVMSTSDRWKVLE HKCRCIEGRGMAPLIVTQFAFDADIVLAWLEALRGRGVEHPVRVGVPGPAGVAVLARYAALCGVSACASMLSKYGISISK LFGIAGPDLFVDRLTTRLTEAHGKVSLHFFPFGGIAQSVKWVEQYCSRAEPEQPIDTAPM >Mature_299_residues ASPLLHSDKSKPIGNITDAYSLEVNAKDISALTAAAPRVLPGSTISIPYLANQDNDARLAAAQAVRGLGFEPMPHLAARR IASFAKLESFIQRAVAEAGVKRCFVIAGDPSTPLGPFADSSSLIESGVFERSGIQMVGVGGHPEGHPVMSTSDRWKVLEH KCRCIEGRGMAPLIVTQFAFDADIVLAWLEALRGRGVEHPVRVGVPGPAGVAVLARYAALCGVSACASMLSKYGISISKL FGIAGPDLFVDRLTTRLTEAHGKVSLHFFPFGGIAQSVKWVEQYCSRAEPEQPIDTAPM
Specific function: Unknown
COG id: COG0685
COG function: function code E; 5,10-methylenetetrahydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31861; Mature: 31730
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPLLHSDKSKPIGNITDAYSLEVNAKDISALTAAAPRVLPGSTISIPYLANQDNDARL CCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCEEECCEEECCCCCHHH AAAQAVRGLGFEPMPHLAARRIASFAKLESFIQRAVAEAGVKRCFVIAGDPSTPLGPFAD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCCCCCCCC SSSLIESGVFERSGIQMVGVGGHPEGHPVMSTSDRWKVLEHKCRCIEGRGMAPLIVTQFA CHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH FDADIVLAWLEALRGRGVEHPVRVGVPGPAGVAVLARYAALCGVSACASMLSKYGISISK HHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LFGIAGPDLFVDRLTTRLTEAHGKVSLHFFPFGGIAQSVKWVEQYCSRAEPEQPIDTAPM HHCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ASPLLHSDKSKPIGNITDAYSLEVNAKDISALTAAAPRVLPGSTISIPYLANQDNDARL CCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCEEECCEEECCCCCHHH AAAQAVRGLGFEPMPHLAARRIASFAKLESFIQRAVAEAGVKRCFVIAGDPSTPLGPFAD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCCCCCCCC SSSLIESGVFERSGIQMVGVGGHPEGHPVMSTSDRWKVLEHKCRCIEGRGMAPLIVTQFA CHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH FDADIVLAWLEALRGRGVEHPVRVGVPGPAGVAVLARYAALCGVSACASMLSKYGISISK HHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LFGIAGPDLFVDRLTTRLTEAHGKVSLHFFPFGGIAQSVKWVEQYCSRAEPEQPIDTAPM HHCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA