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The map label for this gene is rnaSA [H]

Identifier: 94311918

GI number: 94311918

Start: 3244433

End: 3244876

Strand: Reverse

Name: rnaSA [H]

Synonym: Rmet_2986

Alternate gene names: 94311918

Gene position: 3244876-3244433 (Counterclockwise)

Preceding gene: 335055641

Following gene: 94311917

Centisome position: 82.61

GC content: 62.61

Gene sequence:

>444_bases
TTGTCGAGTCAGTCGCAGCGGCAGTCACATTGGCAGTCCCTGAGCCTGGCCCGAAGCCTGGGCCACGTGCTGGCGGGCGC
GGCGATATCCATCGCGCTGACTTTGGCGCCGCAAGGCGCCATGGCCAGGCAGTCGCCCGACGACGTGCAGGGGGTGGTGG
GAACCATCGCCGCACAGCAACTGCCCAACGAGGCACGGCAGACGCTGGAGCGTATCGAGGCCGGTGGGCCGTTCCCGTAT
GACAAGGACGGTTCGCGCTTTGGCAACTACGAGCGCAGCCTGCCGCAGCAATCTCGCGGGTATTACCGCGAGTACACCGT
CAAGAACAGCAATAGCCGGAACCGGGGAGCCAAGCGGATCGTTTGCGGTGGTGATCAACGCGCCGCCAACGACTGTTATT
ACACGGAAGACCACTACAACAGCTTCAAACGGATAACCAAATGA

Upstream 100 bases:

>100_bases
CCTGAAGCGTGCGCCGGGCCTGCGAGGGGTGATTAACAGGTGCCGGAGTGACCCGCAAATAACATTTCGCCAACTTTTCG
ATAACGTGGGTTCCCGGATT

Downstream 100 bases:

>100_bases
TGACTGACATTTTCGGATTGGGCGACGCCCTTGCCGCCCGCGAGGAGCGCGGCGCCGGAGATGGCTGGCAAAGGGCCCAC
CATCAGGCCCAGAACCTATA

Product: Guanyl-specific exported ribonuclease

Products: NA

Alternate protein names: RNase Sa [H]

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSSQSQRQSHWQSLSLARSLGHVLAGAAISIALTLAPQGAMARQSPDDVQGVVGTIAAQQLPNEARQTLERIEAGGPFPY
DKDGSRFGNYERSLPQQSRGYYREYTVKNSNSRNRGAKRIVCGGDQRAANDCYYTEDHYNSFKRITK

Sequences:

>Translated_147_residues
MSSQSQRQSHWQSLSLARSLGHVLAGAAISIALTLAPQGAMARQSPDDVQGVVGTIAAQQLPNEARQTLERIEAGGPFPY
DKDGSRFGNYERSLPQQSRGYYREYTVKNSNSRNRGAKRIVCGGDQRAANDCYYTEDHYNSFKRITK
>Mature_146_residues
SSQSQRQSHWQSLSLARSLGHVLAGAAISIALTLAPQGAMARQSPDDVQGVVGTIAAQQLPNEARQTLERIEAGGPFPYD
KDGSRFGNYERSLPQQSRGYYREYTVKNSNSRNRGAKRIVCGGDQRAANDCYYTEDHYNSFKRITK

Specific function: Unknown

COG id: COG4290

COG function: function code F; Guanyl-specific ribonuclease Sa

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonuclease N1/T1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000026
- InterPro:   IPR016191 [H]

Pfam domain/function: PF00545 Ribonuclease [H]

EC number: =3.1.27.3 [H]

Molecular weight: Translated: 16299; Mature: 16168

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQSQRQSHWQSLSLARSLGHVLAGAAISIALTLAPQGAMARQSPDDVQGVVGTIAAQQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHH
LPNEARQTLERIEAGGPFPYDKDGSRFGNYERSLPQQSRGYYREYTVKNSNSRNRGAKRI
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHCCCEEEEEECCCCCCCCCCCEE
VCGGDQRAANDCYYTEDHYNSFKRITK
EECCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SSQSQRQSHWQSLSLARSLGHVLAGAAISIALTLAPQGAMARQSPDDVQGVVGTIAAQQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHH
LPNEARQTLERIEAGGPFPYDKDGSRFGNYERSLPQQSRGYYREYTVKNSNSRNRGAKRI
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHCCCEEEEEECCCCCCCCCCCEE
VCGGDQRAANDCYYTEDHYNSFKRITK
EECCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3098582; 3118883; 1654932; 8396032; 9757110; 9819211; 11455593 [H]