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The map label for this gene is nudJ [H]

Identifier: 94311891

GI number: 94311891

Start: 3217693

End: 3218244

Strand: Reverse

Name: nudJ [H]

Synonym: Rmet_2959

Alternate gene names: 94311891

Gene position: 3218244-3217693 (Counterclockwise)

Preceding gene: 94311893

Following gene: 94311890

Centisome position: 81.93

GC content: 66.3

Gene sequence:

>552_bases
ATGTGCACCATGTCACGTGATTGGAATGCCAGCGTCACAGTAGCCGCCGTTATCGAACGGGGCGGCCGCTTCCTGCTGGT
GGAAGAGGAAACCGCGGATGGTCTGCGTCTGAACCAGCCCGCCGGCCATCTGGAAGCGGGCGAGAGCCTGATTCGCGCCG
TCGTGCGCGAAACGCTCGAGGAAACCGCGCATTCGTTCGAACCGCGCGCGCTACTGGGCGTCTACACGAGCCGCGGCCGT
TCGTCGCGCGACCAGGGCGACACCACCTATATCCGCTTCGCCTTTACCGGTGATATCGGCACACTCGATGCCGGGCGCCA
GTTGGATACCGGCATCGTCCGTACCGTGTGGATGACCGCCGAGGAACTGCGTGGCTGCCCCGAGCGCCATCGCTCGCCGC
TGCTGATGGCTTGCGTCGACGACTACCTGGCCGGCAAACGCTTCGCGCTCGACATGATCCATACGCATCCGAGCACCGTG
GCCGCGTCGATCGCGCCGGGCGACACCGCCGCGCCGACGAATCCGCCGGCGCAGGCAGGAGCGGCATCATGA

Upstream 100 bases:

>100_bases
GGGGGGGAACCGGCAGATATACGGGCCGAGGTGGACCAAAAGAACCTTCGCGCGATGCACGTTCGCACGGCAACCGGTAA
AATGCCGGATTGCTTAAAAA

Downstream 100 bases:

>100_bases
GCGGCAAGCGCGTGGTGGTGGGCTTGTCCGGTGGCGTCGATTCGTCGGTCACCGCATGGTTGCTGAAGCAGCAGGGTTAT
GAAGTCATCGGCTTGTTCAT

Product: putative NTP pyrophosphohydrolase including oxidative damage repair enzymes

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MCTMSRDWNASVTVAAVIERGGRFLLVEEETADGLRLNQPAGHLEAGESLIRAVVRETLEETAHSFEPRALLGVYTSRGR
SSRDQGDTTYIRFAFTGDIGTLDAGRQLDTGIVRTVWMTAEELRGCPERHRSPLLMACVDDYLAGKRFALDMIHTHPSTV
AASIAPGDTAAPTNPPAQAGAAS

Sequences:

>Translated_183_residues
MCTMSRDWNASVTVAAVIERGGRFLLVEEETADGLRLNQPAGHLEAGESLIRAVVRETLEETAHSFEPRALLGVYTSRGR
SSRDQGDTTYIRFAFTGDIGTLDAGRQLDTGIVRTVWMTAEELRGCPERHRSPLLMACVDDYLAGKRFALDMIHTHPSTV
AASIAPGDTAAPTNPPAQAGAAS
>Mature_183_residues
MCTMSRDWNASVTVAAVIERGGRFLLVEEETADGLRLNQPAGHLEAGESLIRAVVRETLEETAHSFEPRALLGVYTSRGR
SSRDQGDTTYIRFAFTGDIGTLDAGRQLDTGIVRTVWMTAEELRGCPERHRSPLLMACVDDYLAGKRFALDMIHTHPSTV
AASIAPGDTAAPTNPPAQAGAAS

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=142, Percent_Identity=35.9154929577465, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 19712; Mature: 19712

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTMSRDWNASVTVAAVIERGGRFLLVEEETADGLRLNQPAGHLEAGESLIRAVVRETLE
CCCCCCCCCCCCHHEEEHHCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
ETAHSFEPRALLGVYTSRGRSSRDQGDTTYIRFAFTGDIGTLDAGRQLDTGIVRTVWMTA
HHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCH
EELRGCPERHRSPLLMACVDDYLAGKRFALDMIHTHPSTVAASIAPGDTAAPTNPPAQAG
HHHCCCHHHHCCCEEHHHHHHHHCCCHHEEHHHHCCCCCEEEEECCCCCCCCCCCCCCCC
AAS
CCC
>Mature Secondary Structure
MCTMSRDWNASVTVAAVIERGGRFLLVEEETADGLRLNQPAGHLEAGESLIRAVVRETLE
CCCCCCCCCCCCHHEEEHHCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
ETAHSFEPRALLGVYTSRGRSSRDQGDTTYIRFAFTGDIGTLDAGRQLDTGIVRTVWMTA
HHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCH
EELRGCPERHRSPLLMACVDDYLAGKRFALDMIHTHPSTVAASIAPGDTAAPTNPPAQAG
HHHCCCHHHHCCCEEHHHHHHHHCCCHHEEHHHHCCCCCEEEEECCCCCCCCCCCCCCCC
AAS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA