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The map label for this gene is oxyR [H]

Identifier: 94311873

GI number: 94311873

Start: 3195691

End: 3196647

Strand: Reverse

Name: oxyR [H]

Synonym: Rmet_2941

Alternate gene names: 94311873

Gene position: 3196647-3195691 (Counterclockwise)

Preceding gene: 94311874

Following gene: 94311872

Centisome position: 81.38

GC content: 66.14

Gene sequence:

>957_bases
ATGACGCTCACCGAACTCAAGTACATCGTCGCCGTGGCGCGCGAGCGCCATTTCGGCCGGGCTGCCGAGGCCTGCTTCGT
GTCGCAGCCGACCCTGTCGGTCGCCATCAAGAAGCTGGAGGACGAGCTGACCGTGCAGATCTTCGAGCGGGGCACCTCCG
AGGTGTCGGTGACGGCCATCGGCGAGCAGATCGTCGCGCAGGCGCAGCGTGTGCTTGAGCAGACCATGGCGATTCGTGAG
ATCGCCAAGCAGGGCAAGGACCCGCTGGCCGGGCCGCTGCGATTGGGCGTGATCTACACGATCGGGCCGTACCTGCTGCC
GGCACTGGTCAAGCAGATGATCGAGACCGTGCCGCAGATGCCGCTGATGCTGCAGGAGAACTACACGAACAAGCTGATCG
AACTGCTCAAGCAGGGCGAAATCGACTGCGCGATCATGGCCGAGCCGTTCCCGGACTCCGGCCTGACGGTGCGTCCGCTG
TATGACGAGCCGTTCGTGGTGGCCGTGCCGCGCGGGCACCAGCTTTCCCAGCAGACCAAGGTGGATCCGGACGAACTGAA
GCAGCAGACCATGCTGCTGCTCGGCAGCGGCCATTGTTTCCGCGATCACGTGCTGAGCGTGTGTCCGGAACTGTCGCGCT
TCTCGCAGGCGGCCGACGGCATCCAGAAGACGTTCGAAGGTTCGTCGCTCGAGACCATCCGTCATATGGTGGCCAGCGGT
GTTGGTATCACCGTGCTGCCGCGCACCTCGGTGCCCGACCTCAAGCCGCACAACGACATGCTGTCCTACGTGCCGTTTGC
CGAGCCCGTGCCGGACCGCCGCGTGGTGCTGGCCTGGCGCAAGAGCTTCACGCGGCTTCCCGCCATGGAAGCGCTGGCCA
ACGCGGTGGCCGCGTGCGAACTGCCCGGCGTGCGCAGGCTCGGCGACACGGAGACGGTCGAGGCCGTCGCGGCCTGA

Upstream 100 bases:

>100_bases
GGAGAGGTCTGAAAGTGGCGAATCAGCTTCTTTTGCCTGTCGATCTGACAAGGACGGGAATCGAAGCTAAAATCTATCGC
CTAACCGGAATTGATTGATC

Downstream 100 bases:

>100_bases
ATCCCATCCCGGCCTGACCGCCGGGCCATATCCCTTCTGCAAGCATAGGTATCGTCTATTCGATATATGAAATTTATCGA
ATAGACGATTCAATAGTCGC

Product: oxidative stress-inducible genes activator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELTVQIFERGTSEVSVTAIGEQIVAQAQRVLEQTMAIRE
IAKQGKDPLAGPLRLGVIYTIGPYLLPALVKQMIETVPQMPLMLQENYTNKLIELLKQGEIDCAIMAEPFPDSGLTVRPL
YDEPFVVAVPRGHQLSQQTKVDPDELKQQTMLLLGSGHCFRDHVLSVCPELSRFSQAADGIQKTFEGSSLETIRHMVASG
VGITVLPRTSVPDLKPHNDMLSYVPFAEPVPDRRVVLAWRKSFTRLPAMEALANAVAACELPGVRRLGDTETVEAVAA

Sequences:

>Translated_318_residues
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELTVQIFERGTSEVSVTAIGEQIVAQAQRVLEQTMAIRE
IAKQGKDPLAGPLRLGVIYTIGPYLLPALVKQMIETVPQMPLMLQENYTNKLIELLKQGEIDCAIMAEPFPDSGLTVRPL
YDEPFVVAVPRGHQLSQQTKVDPDELKQQTMLLLGSGHCFRDHVLSVCPELSRFSQAADGIQKTFEGSSLETIRHMVASG
VGITVLPRTSVPDLKPHNDMLSYVPFAEPVPDRRVVLAWRKSFTRLPAMEALANAVAACELPGVRRLGDTETVEAVAA
>Mature_317_residues
TLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELTVQIFERGTSEVSVTAIGEQIVAQAQRVLEQTMAIREI
AKQGKDPLAGPLRLGVIYTIGPYLLPALVKQMIETVPQMPLMLQENYTNKLIELLKQGEIDCAIMAEPFPDSGLTVRPLY
DEPFVVAVPRGHQLSQQTKVDPDELKQQTMLLLGSGHCFRDHVLSVCPELSRFSQAADGIQKTFEGSSLETIRHMVASGV
GITVLPRTSVPDLKPHNDMLSYVPFAEPVPDRRVVLAWRKSFTRLPAMEALANAVAACELPGVRRLGDTETVEAVAA

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=298, Percent_Identity=38.5906040268456, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI145693105, Length=292, Percent_Identity=29.1095890410959, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788748, Length=298, Percent_Identity=28.8590604026846, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI157672245, Length=304, Percent_Identity=27.6315789473684, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI2367136, Length=246, Percent_Identity=29.6747967479675, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI1787530, Length=262, Percent_Identity=27.8625954198473, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788887, Length=288, Percent_Identity=26.7361111111111, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787879, Length=297, Percent_Identity=26.9360269360269, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787601, Length=174, Percent_Identity=29.8850574712644, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788296, Length=180, Percent_Identity=30, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI87082132, Length=297, Percent_Identity=23.9057239057239, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1788481, Length=313, Percent_Identity=26.517571884984, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1786401, Length=247, Percent_Identity=28.3400809716599, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87081904, Length=181, Percent_Identity=32.0441988950276, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1787806, Length=287, Percent_Identity=21.2543554006969, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788297, Length=258, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790208, Length=149, Percent_Identity=32.2147651006711, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790262, Length=259, Percent_Identity=24.3243243243243, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34982; Mature: 34851

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELTVQIFERGTSEVSVTAI
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH
GEQIVAQAQRVLEQTMAIREIAKQGKDPLAGPLRLGVIYTIGPYLLPALVKQMIETVPQM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLMLQENYTNKLIELLKQGEIDCAIMAEPFPDSGLTVRPLYDEPFVVAVPRGHQLSQQTK
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCHHCC
VDPDELKQQTMLLLGSGHCFRDHVLSVCPELSRFSQAADGIQKTFEGSSLETIRHMVASG
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
VGITVLPRTSVPDLKPHNDMLSYVPFAEPVPDRRVVLAWRKSFTRLPAMEALANAVAACE
CCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHC
LPGVRRLGDTETVEAVAA
CCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
TLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELTVQIFERGTSEVSVTAI
CHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH
GEQIVAQAQRVLEQTMAIREIAKQGKDPLAGPLRLGVIYTIGPYLLPALVKQMIETVPQM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLMLQENYTNKLIELLKQGEIDCAIMAEPFPDSGLTVRPLYDEPFVVAVPRGHQLSQQTK
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCHHCC
VDPDELKQQTMLLLGSGHCFRDHVLSVCPELSRFSQAADGIQKTFEGSSLETIRHMVASG
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
VGITVLPRTSVPDLKPHNDMLSYVPFAEPVPDRRVVLAWRKSFTRLPAMEALANAVAACE
CCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHC
LPGVRRLGDTETVEAVAA
CCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA