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The map label for this gene is 94311865

Identifier: 94311865

GI number: 94311865

Start: 3188604

End: 3189296

Strand: Direct

Name: 94311865

Synonym: Rmet_2933

Alternate gene names: NA

Gene position: 3188604-3189296 (Clockwise)

Preceding gene: 94311864

Following gene: 94311869

Centisome position: 81.17

GC content: 68.25

Gene sequence:

>693_bases
GTGAGCCGACGCGCCGACCGCCTGTTCCAGATCGTCCAGGTCCTGCGAGGCCGCCGCCTGACCACGGCGGCGCTGCTGGC
CCAGCGCCTGGGCGTTTCCGAACGCACTGTCTATCGGGATATCCAGGCGCTGTCGCTCTCGGGCGTGCCGGTTGAAGGCG
AGGCCGGCATTGGCTACCGGCTGCGGCCCGACTACGACGTGCCGCCACTGATGTTCACGTCGATGGAAGTCGAGGCCATG
GTGGCCGGGTTGCGGCTGCTCAAGGCCTGGGGCGGCGGCGCGCTGGCCGCCGCCGCCGATCCCTCGCTCGAAAAACTGAT
GGCCGCCCTACCGCCGCAACGGCGCGTGGCCGCGCAGCAGAGCCGCATTTTCGCGCCCGAGTACGTCAACCAGCCCGCCG
TGCGCGAGGCTTTCGACATCGTGCATACGGCCATCGGCGCGCAACGCCTGCTGCGGATCGACTACAGCGACGCGCAGCAA
CGCGAAAGCGTGCGCGTGGTGCAACCACTGGGCCTGTTCTTCTGGGGTAATGTCTGGCTGCTGGCGGCGTGGTGCACGAC
GCGCTCCGACTACCGCAGCTTCCGGCTGGACCGCTGCCGCGCCCTGACGATGCTCGACGAGCATTTCCTCGAGACGTCAG
AGCGTTCGCTCAACGGATTCCTCCGCACCATCCATTCCGACACGCAGGGATAG

Upstream 100 bases:

>100_bases
CCTGACAACCTTGGGCGCTACGCGCATATCAAGGACAGCGAGGGCAACCGGATCGGCCTGCACGAGCCGGGCACCCACTG
ACGAGGAAAGTGAGCACCCC

Downstream 100 bases:

>100_bases
TCGGGCACGGAGCCCGCCGGCTTATCTCACGCCGGTTGTTCGGCGAGCAGCGACTCGATGTCTGCGCGGATTTCCTCGGG
CTTGGTTGTGGACGCATAAC

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; DeoR-Family Transcriptional Regulator; HTH Domain Family; Transcription Regulator Protein; Regulatory Protein; NB-Dependent Receptor; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; HTH Type; HTH Domain-Containing Protein; DeoR Family Transriptional Regulator; Transcription Regulator Protein DeoR Family; HTH Domain-Containing; Helix-Turn-Helix Domain-Containing Protein; Deor Family Transcriptional Regulator; HTH Domain Protein; Transcriptional Regulator-Like; Bacterial Regulatory Protein DeoR Family; Protein Containing HTH Domain; DeoR-Like Helix-Turn-Helix Domain Protein; Transriptional Regulator DeoR Family; Regulatory Protein Deor; LOW QUALITY PROTEIN Helix-Turn-Helix Type

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSRRADRLFQIVQVLRGRRLTTAALLAQRLGVSERTVYRDIQALSLSGVPVEGEAGIGYRLRPDYDVPPLMFTSMEVEAM
VAGLRLLKAWGGGALAAAADPSLEKLMAALPPQRRVAAQQSRIFAPEYVNQPAVREAFDIVHTAIGAQRLLRIDYSDAQQ
RESVRVVQPLGLFFWGNVWLLAAWCTTRSDYRSFRLDRCRALTMLDEHFLETSERSLNGFLRTIHSDTQG

Sequences:

>Translated_230_residues
MSRRADRLFQIVQVLRGRRLTTAALLAQRLGVSERTVYRDIQALSLSGVPVEGEAGIGYRLRPDYDVPPLMFTSMEVEAM
VAGLRLLKAWGGGALAAAADPSLEKLMAALPPQRRVAAQQSRIFAPEYVNQPAVREAFDIVHTAIGAQRLLRIDYSDAQQ
RESVRVVQPLGLFFWGNVWLLAAWCTTRSDYRSFRLDRCRALTMLDEHFLETSERSLNGFLRTIHSDTQG
>Mature_229_residues
SRRADRLFQIVQVLRGRRLTTAALLAQRLGVSERTVYRDIQALSLSGVPVEGEAGIGYRLRPDYDVPPLMFTSMEVEAMV
AGLRLLKAWGGGALAAAADPSLEKLMAALPPQRRVAAQQSRIFAPEYVNQPAVREAFDIVHTAIGAQRLLRIDYSDAQQR
ESVRVVQPLGLFFWGNVWLLAAWCTTRSDYRSFRLDRCRALTMLDEHFLETSERSLNGFLRTIHSDTQG

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25833; Mature: 25702

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRADRLFQIVQVLRGRRLTTAALLAQRLGVSERTVYRDIQALSLSGVPVEGEAGIGYR
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEE
LRPDYDVPPLMFTSMEVEAMVAGLRLLKAWGGGALAAAADPSLEKLMAALPPQRRVAAQQ
ECCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCHHHHHHHH
SRIFAPEYVNQPAVREAFDIVHTAIGAQRLLRIDYSDAQQRESVRVVQPLGLFFWGNVWL
HCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAAWCTTRSDYRSFRLDRCRALTMLDEHFLETSERSLNGFLRTIHSDTQG
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRRADRLFQIVQVLRGRRLTTAALLAQRLGVSERTVYRDIQALSLSGVPVEGEAGIGYR
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEE
LRPDYDVPPLMFTSMEVEAMVAGLRLLKAWGGGALAAAADPSLEKLMAALPPQRRVAAQQ
ECCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCHHHHHHHH
SRIFAPEYVNQPAVREAFDIVHTAIGAQRLLRIDYSDAQQRESVRVVQPLGLFFWGNVWL
HCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAAWCTTRSDYRSFRLDRCRALTMLDEHFLETSERSLNGFLRTIHSDTQG
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA