| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is livM2 [H]
Identifier: 94311797
GI number: 94311797
Start: 3114659
End: 3115813
Strand: Reverse
Name: livM2 [H]
Synonym: Rmet_2865
Alternate gene names: 94311797
Gene position: 3115813-3114659 (Counterclockwise)
Preceding gene: 94311798
Following gene: 94311796
Centisome position: 79.32
GC content: 62.08
Gene sequence:
>1155_bases ATGAATACTCCGATTCCATCCACGGCCGTGGCGGCGCCGTCGCGCGTGCCGGCCAAGACGCTGGCCGCGCTGGTCGGCTT CCTGGTGGTCGCGCTCTGCGCGCCGTTCTTCGTCCAGACCTTTGGCGGCAATTACTGGGTGCGCGTGCTCGACTTCGCGC TGCTCTACATCATGCTGGCGCTGGGCCTGAACATCGTGGTCGGCTTTGCCGGTCTGCTTGATCTGGGCTACATCGCGTTC TACGCGGTAGGCGCCTACATGATGGCGTTGCTCGGCTCGCCTCACCTGTCCAATCAGTTCGAGTGGATCCACCAGTTGTT CCCTAACGGACTGCACCTGTCGATGTGGTTCGTCCTGCCAATCGCGGTGGTGGTGGCGGCCACGTTCGGCGTGCTGCTGG GTGCGCCAACGCTGAAGCTACGCGGGGATTACCTGGCCATCGTGACACTGGGCTTCGGCGAGATCGTCCGCATCTTCATG AACAACCTGGACCGTCCGGTGAACATCACCAACGGCCCCAAGGGCATCACGGCAGTGGACCCGGTCCACATCTTCGGTTT CGACTTCTCGAAGTCGCACGAGATCTTCGGGCTCAAGTTCACACCGGTGTTCATGTACTACTACCTGCTGGTGGCGCTGG TCATTGTCATCGTGTTTATCTGCCTGCGATTGCAGAACTCGCGTATCGGCCGTGCCTTCGTGGCCATCCGCGAAGACGAA ATCGCCGCCAAGGCGATGGGTATCAACACGCGCAACATCAAGCTGCTGGCCTTTGCCATGGGTGCCTCGTTTGGCGGTGC ATCGGGTGCGACTTTCGGCGCATTCCAGGGCTTCGTCTCGCCGGAATCGTTCACGTTGTGGGAATCGATCTACGTCCTGG CGATTGTGGTGCTGGGCGGCATGGGCCACATCCCGGGCGTGATCCTGGGCGGCATCCTTCTGGTGGGCTTCCAGGAGCTG TTGCGTGCCGTGGCGGAACCGATCCAGACCGGCATCTTCGGCCAGGTCATTGTCGATGCCGAAGTGCTGCGCCAGTTGTT GTTCGGTCTGGCCCTGGTGGGCGTGATGCTGTATCGCCCGGCCGGCCTGTGGCCATCGCCACGCAAGGAAGACCGCCCAG TTGTGCGTCGTGCCGGCAGTGTCGGTCGTTTCTGA
Upstream 100 bases:
>100_bases GACGTTTTCGCCTTCATCGTGCTGATCATCGTGCTCGTGTTCCGTCCGTCCGGCATCATGGGCGAACGTGTGGCTGACCG CGCCTGAGGGGAGAGAATCC
Downstream 100 bases:
>100_bases ACAGGGGGACAACATGAGCAATTCCGATTTCCTCCTGTCCGTACAGGGGGTCAACAAACGTTTTGGCGGCCTGCAGGCAC TGTCCGATGTGGGCCTGCAA
Product: leucine/isoleucine/valine ABC transporter membrane protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MNTPIPSTAVAAPSRVPAKTLAALVGFLVVALCAPFFVQTFGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAF YAVGAYMMALLGSPHLSNQFEWIHQLFPNGLHLSMWFVLPIAVVVAATFGVLLGAPTLKLRGDYLAIVTLGFGEIVRIFM NNLDRPVNITNGPKGITAVDPVHIFGFDFSKSHEIFGLKFTPVFMYYYLLVALVIVIVFICLRLQNSRIGRAFVAIREDE IAAKAMGINTRNIKLLAFAMGASFGGASGATFGAFQGFVSPESFTLWESIYVLAIVVLGGMGHIPGVILGGILLVGFQEL LRAVAEPIQTGIFGQVIVDAEVLRQLLFGLALVGVMLYRPAGLWPSPRKEDRPVVRRAGSVGRF
Sequences:
>Translated_384_residues MNTPIPSTAVAAPSRVPAKTLAALVGFLVVALCAPFFVQTFGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAF YAVGAYMMALLGSPHLSNQFEWIHQLFPNGLHLSMWFVLPIAVVVAATFGVLLGAPTLKLRGDYLAIVTLGFGEIVRIFM NNLDRPVNITNGPKGITAVDPVHIFGFDFSKSHEIFGLKFTPVFMYYYLLVALVIVIVFICLRLQNSRIGRAFVAIREDE IAAKAMGINTRNIKLLAFAMGASFGGASGATFGAFQGFVSPESFTLWESIYVLAIVVLGGMGHIPGVILGGILLVGFQEL LRAVAEPIQTGIFGQVIVDAEVLRQLLFGLALVGVMLYRPAGLWPSPRKEDRPVVRRAGSVGRF >Mature_384_residues MNTPIPSTAVAAPSRVPAKTLAALVGFLVVALCAPFFVQTFGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAF YAVGAYMMALLGSPHLSNQFEWIHQLFPNGLHLSMWFVLPIAVVVAATFGVLLGAPTLKLRGDYLAIVTLGFGEIVRIFM NNLDRPVNITNGPKGITAVDPVHIFGFDFSKSHEIFGLKFTPVFMYYYLLVALVIVIVFICLRLQNSRIGRAFVAIREDE IAAKAMGINTRNIKLLAFAMGASFGGASGATFGAFQGFVSPESFTLWESIYVLAIVVLGGMGHIPGVILGGILLVGFQEL LRAVAEPIQTGIFGQVIVDAEVLRQLLFGLALVGVMLYRPAGLWPSPRKEDRPVVRRAGSVGRF
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=336, Percent_Identity=44.3452380952381, Blast_Score=219, Evalue=3e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 41544; Mature: 41544
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPIPSTAVAAPSRVPAKTLAALVGFLVVALCAPFFVQTFGGNYWVRVLDFALLYIMLA CCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LGLNIVVGFAGLLDLGYIAFYAVGAYMMALLGSPHLSNQFEWIHQLFPNGLHLSMWFVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH IAVVVAATFGVLLGAPTLKLRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITAVD HHHHHHHHHHHHHCCCCEEECCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCEEC PVHIFGFDFSKSHEIFGLKFTPVFMYYYLLVALVIVIVFICLRLQNSRIGRAFVAIREDE CEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHH IAAKAMGINTRNIKLLAFAMGASFGGASGATFGAFQGFVSPESFTLWESIYVLAIVVLGG HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCC MGHIPGVILGGILLVGFQELLRAVAEPIQTGIFGQVIVDAEVLRQLLFGLALVGVMLYRP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGLWPSPRKEDRPVVRRAGSVGRF CCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure MNTPIPSTAVAAPSRVPAKTLAALVGFLVVALCAPFFVQTFGGNYWVRVLDFALLYIMLA CCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LGLNIVVGFAGLLDLGYIAFYAVGAYMMALLGSPHLSNQFEWIHQLFPNGLHLSMWFVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH IAVVVAATFGVLLGAPTLKLRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITAVD HHHHHHHHHHHHHCCCCEEECCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCEEC PVHIFGFDFSKSHEIFGLKFTPVFMYYYLLVALVIVIVFICLRLQNSRIGRAFVAIREDE CEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHH IAAKAMGINTRNIKLLAFAMGASFGGASGATFGAFQGFVSPESFTLWESIYVLAIVVLGG HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCC MGHIPGVILGGILLVGFQELLRAVAEPIQTGIFGQVIVDAEVLRQLLFGLALVGVMLYRP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGLWPSPRKEDRPVVRRAGSVGRF CCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]