| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is tauA
Identifier: 94311791
GI number: 94311791
Start: 3108184
End: 3109137
Strand: Reverse
Name: tauA
Synonym: Rmet_2859
Alternate gene names: NA
Gene position: 3109137-3108184 (Counterclockwise)
Preceding gene: 94311792
Following gene: 94311790
Centisome position: 79.15
GC content: 64.05
Gene sequence:
>954_bases ATGTCGCTGCAACGCCACGCAGTCACCGCCATTCTTGCCCTCGCGGCTTCCGCCGCCGCCACCGCCCATGCGGATAACAC GCCGGTTGTGCTCGGCATGAGTGGATGGACCGGCTTCGCGCCGCTGACACTGGCCGACAAGGCCGGCATCTTCAAGAAGC ATGGCGTTGACGTGGACATCAAGATGATTCCGCAGAAGGACCGCCACCTTGCGCTGGCGTCGGGTGCGATCCAGTGCGCG GCGACCACGGTGGAAACGCATGTGGCGTGGAATGCCAATGGGGTGCCGATCACGCAGATCGTGCAGCTCGACAAGTCCTA TGGCGCGGACGGCCTGGCCGTGCGCAGCGACGTCAAGAGCTTTGCGGACCTGAAGGGCAAGACCATCGGCGTCGACGCGC CCGGCACCGCGCCGTATTTCGGCCTGGCCTGGATGCTCAAGAAAAACGGCATGACGCTGAAGGACGTCAAGGTGACCACG CTGTCGCCACAGGCTGCCGCCCAGGCATTCGTGGCCGGCCAGAACGACGGCGCGATGACGTACGAGCCGTATCTGTCGAC GGTGCGCGCGAACCCGGACAAGGGCAAGATCCTGGCCACCACGCTCGACTACCCGATGGTGACCGATACGCTCGGCTGCG CGCCGAAGTGGCTCAAGGACAATCCCAAGGCCGCGCAGGCGCTGGTGGATAGCTATTTCGAAGCGCTCGAGATGATCCGC AAGGAGCCGGACAAGGCCAACGAGATCATGGGCGCGGCGGTCAAGCAGACCGGCGAGCAGTTCGCGAAATCCGCGGCGTA CCTGCGTTGGCAGGACAAGGACGCCAACCGCAAGTTCTTCAGTGGTGAGCTGGCCAGCTTCAGCAAGGAAGCCGCCGGCG TGCTGATGGACATCGGCGTGATTCGCCAGGTGCCGGATGTGACGGCGATCTATGACGCACGCTTCCTCAAGTAA
Upstream 100 bases:
>100_bases AGCGTTGCTAAATTGCCCGTCACGGCGGCAGCGCAGTCAGCGCCGCCCGATCCGGGAGACGGGTCCTGCCCCCACATCTG ACGACCATTGGAGCCGACGC
Downstream 100 bases:
>100_bases GACGGAGTCCCCGGCCATGTCGCAAGCCTCCACGCCAACCACCGCGGCCGCTGCCCGCGTGCCCGCGCCGATCGAGGCGC AGGGCGCGCCCGCGCGGCGC
Product: taurine ABC transporter periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSLQRHAVTAILALAASAAATAHADNTPVVLGMSGWTGFAPLTLADKAGIFKKHGVDVDIKMIPQKDRHLALASGAIQCA ATTVETHVAWNANGVPITQIVQLDKSYGADGLAVRSDVKSFADLKGKTIGVDAPGTAPYFGLAWMLKKNGMTLKDVKVTT LSPQAAAQAFVAGQNDGAMTYEPYLSTVRANPDKGKILATTLDYPMVTDTLGCAPKWLKDNPKAAQALVDSYFEALEMIR KEPDKANEIMGAAVKQTGEQFAKSAAYLRWQDKDANRKFFSGELASFSKEAAGVLMDIGVIRQVPDVTAIYDARFLK
Sequences:
>Translated_317_residues MSLQRHAVTAILALAASAAATAHADNTPVVLGMSGWTGFAPLTLADKAGIFKKHGVDVDIKMIPQKDRHLALASGAIQCA ATTVETHVAWNANGVPITQIVQLDKSYGADGLAVRSDVKSFADLKGKTIGVDAPGTAPYFGLAWMLKKNGMTLKDVKVTT LSPQAAAQAFVAGQNDGAMTYEPYLSTVRANPDKGKILATTLDYPMVTDTLGCAPKWLKDNPKAAQALVDSYFEALEMIR KEPDKANEIMGAAVKQTGEQFAKSAAYLRWQDKDANRKFFSGELASFSKEAAGVLMDIGVIRQVPDVTAIYDARFLK >Mature_316_residues SLQRHAVTAILALAASAAATAHADNTPVVLGMSGWTGFAPLTLADKAGIFKKHGVDVDIKMIPQKDRHLALASGAIQCAA TTVETHVAWNANGVPITQIVQLDKSYGADGLAVRSDVKSFADLKGKTIGVDAPGTAPYFGLAWMLKKNGMTLKDVKVTTL SPQAAAQAFVAGQNDGAMTYEPYLSTVRANPDKGKILATTLDYPMVTDTLGCAPKWLKDNPKAAQALVDSYFEALEMIRK EPDKANEIMGAAVKQTGEQFAKSAAYLRWQDKDANRKFFSGELASFSKEAAGVLMDIGVIRQVPDVTAIYDARFLK
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 33864; Mature: 33733
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQRHAVTAILALAASAAATAHADNTPVVLGMSGWTGFAPLTLADKAGIFKKHGVDVDI CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCCCCHHHCCCCEEE KMIPQKDRHLALASGAIQCAATTVETHVAWNANGVPITQIVQLDKSYGADGLAVRSDVKS EECCCCCCEEEEECCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHH FADLKGKTIGVDAPGTAPYFGLAWMLKKNGMTLKDVKVTTLSPQAAAQAFVAGQNDGAMT HHHCCCCEEECCCCCCCCHHHHEEEECCCCCEEEEEEEEEECHHHHHHHHEECCCCCCEE YEPYLSTVRANPDKGKILATTLDYPMVTDTLGCAPKWLKDNPKAAQALVDSYFEALEMIR EHHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHH KEPDKANEIMGAAVKQTGEQFAKSAAYLRWQDKDANRKFFSGELASFSKEAAGVLMDIGV CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH IRQVPDVTAIYDARFLK HHCCCCHHHHHHHHHCC >Mature Secondary Structure SLQRHAVTAILALAASAAATAHADNTPVVLGMSGWTGFAPLTLADKAGIFKKHGVDVDI CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCCCCHHHCCCCEEE KMIPQKDRHLALASGAIQCAATTVETHVAWNANGVPITQIVQLDKSYGADGLAVRSDVKS EECCCCCCEEEEECCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHH FADLKGKTIGVDAPGTAPYFGLAWMLKKNGMTLKDVKVTTLSPQAAAQAFVAGQNDGAMT HHHCCCCEEECCCCCCCCHHHHEEEECCCCCEEEEEEEEEECHHHHHHHHEECCCCCCEE YEPYLSTVRANPDKGKILATTLDYPMVTDTLGCAPKWLKDNPKAAQALVDSYFEALEMIR EHHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHH KEPDKANEIMGAAVKQTGEQFAKSAAYLRWQDKDANRKFFSGELASFSKEAAGVLMDIGV CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH IRQVPDVTAIYDARFLK HHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]