| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94311760
Identifier: 94311760
GI number: 94311760
Start: 3076276
End: 3077700
Strand: Reverse
Name: 94311760
Synonym: Rmet_2828
Alternate gene names: NA
Gene position: 3077700-3076276 (Counterclockwise)
Preceding gene: 94311767
Following gene: 94311754
Centisome position: 78.35
GC content: 59.44
Gene sequence:
>1425_bases ATGAATATTAGTCTTCATAATATTCAACTGGACGGCACACTGCAAGACTATCTCTACGCCGTCGCCCAGCAGACCGGAGG ACTCAGGGACATGAAAGCAGCCGCCATCAGCACATTCATCGAGGAGAACTGTCCTGAGCTGGGTGCGACCGAACGCAGGA ATTTCTCGTCGTGGCTTAAGGATGTGGTCGATGGTGTGCCGATATCATCGAACATGCCTAGTCACAACCTGCCGTTCCAG CGCTGGTATCGATTCAAGGAGGCATTCTCGCCGCTGATGGTGGCCGAGTCGCTCAGTTGCCTGGGATTCTGGCCATCGAC ATGCCTCGATTGCTTCGGGGGGTCGGGGACAACAGCGCTTACATGCCAATTCCTCGGCATCGAATCGACGTCCATCGAGG TAAACCCGTTTCTGGCCGATCTGATCGAAGCGAAGCTGTCGAAGTACGATCACGCGTCGTTGATCGATGACTTCGCCGGC GTCGTTAAGAAGATGAGCACCCGCTCGGCCACCCTACGATCGATCCGCTACGAGTCGTGGCCAGCCACCATGGTCGAGCC CGGCCTCAAAGATCGCTGGATTTTTCCGCGGGAGACATTCCGCCGCATTTTGACGATCCGTGAGGCCATCGACGAAATCA CCAACCCCGTCAACCAGCGCCTGCTACGCGTGCTGCTCGGAAGCATCCTGATTGACATGAGCAATGTCGTGATTAGCGGC AAGGGGCGCCGGTACCGTTCCAACTGGCAGGCCACCCAGAAAAGCCCACGCGACGTCAGCGTGGCGTTCCAGGCGGCGTT TCAAGCAGCGCTGTTCGATATTAGCGCGCACGGCGCTCGCGCATGCGAGAGCTACAGACTGCTTCGGGGCGACTCGCGGG TGGAAGTCGACAAGGTCGGCCAGGTCGATGTCGCGCTGTTTTCGCCGCCGTACCCGAACAGCTTCGACTACACCGACATT TACAACGTCGAACTGTGGGTGCTGGGCTATTTGAAGAGCCGGGCCGATAACACTGAGCTGCGGAGTTCCACCCTGCGGTC GCACGTGCAGATCCACCGCGACATGAGTTGGGAGGGGCTGGACTCGCGCAAGCTGCGCCAGACGGTGAAAGCTTTGACGA AGAGACGTGCTCAACTCTGGGATCCGCACCTGCCCGACATGATCGGCGCGTATTTCGCCGACCTAGTGCAGATCTTGAAG TCTGTGCGGGGCAAGATGAACCCAGAGGGCGCCGTACTGATGACCGTCGGCGACAGTCGGTATGCTGACGTCTTGATCGA TGTCGGGGACATCCTTCGCGAGCTAGCCGAAGGAGCTGGTTACGTCTGCGAAGCCGTCACGCCGATCCGCGCCATGAAGA CCAGCGCGCAGCAGGGGTGGCAGGCGTCCCTAAGCGAAGACTTGGTGCGCCTGCGCCCGGCCTGA
Upstream 100 bases:
>100_bases TGAGAGATGTCCCTTCGCCGCCAAGCTTTGCGGATGGTCTCAGCCATTTCTTCGGGTGTCGCGGATGACATATTTTTGGG CGACACTGTCGCTTGCTTGA
Downstream 100 bases:
>100_bases ACAGGTCCCTACCTTCCCTATCGGAGTGTCCCTAGTCCCGGTTCGGCCTTTCCCAAAGCTAGTTGAACGAGAGCATGTCC GGGCGGCTTGCCGCTGATCC
Product: putative superfamily S-adenosyl-L-methionine-dependent methyltransferase
Products: NA
Alternate protein names: Adenine-Specific DNA Methyltransferase; DNA Methylase; DNA Methylase Domain Protein
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MNISLHNIQLDGTLQDYLYAVAQQTGGLRDMKAAAISTFIEENCPELGATERRNFSSWLKDVVDGVPISSNMPSHNLPFQ RWYRFKEAFSPLMVAESLSCLGFWPSTCLDCFGGSGTTALTCQFLGIESTSIEVNPFLADLIEAKLSKYDHASLIDDFAG VVKKMSTRSATLRSIRYESWPATMVEPGLKDRWIFPRETFRRILTIREAIDEITNPVNQRLLRVLLGSILIDMSNVVISG KGRRYRSNWQATQKSPRDVSVAFQAAFQAALFDISAHGARACESYRLLRGDSRVEVDKVGQVDVALFSPPYPNSFDYTDI YNVELWVLGYLKSRADNTELRSSTLRSHVQIHRDMSWEGLDSRKLRQTVKALTKRRAQLWDPHLPDMIGAYFADLVQILK SVRGKMNPEGAVLMTVGDSRYADVLIDVGDILRELAEGAGYVCEAVTPIRAMKTSAQQGWQASLSEDLVRLRPA
Sequences:
>Translated_474_residues MNISLHNIQLDGTLQDYLYAVAQQTGGLRDMKAAAISTFIEENCPELGATERRNFSSWLKDVVDGVPISSNMPSHNLPFQ RWYRFKEAFSPLMVAESLSCLGFWPSTCLDCFGGSGTTALTCQFLGIESTSIEVNPFLADLIEAKLSKYDHASLIDDFAG VVKKMSTRSATLRSIRYESWPATMVEPGLKDRWIFPRETFRRILTIREAIDEITNPVNQRLLRVLLGSILIDMSNVVISG KGRRYRSNWQATQKSPRDVSVAFQAAFQAALFDISAHGARACESYRLLRGDSRVEVDKVGQVDVALFSPPYPNSFDYTDI YNVELWVLGYLKSRADNTELRSSTLRSHVQIHRDMSWEGLDSRKLRQTVKALTKRRAQLWDPHLPDMIGAYFADLVQILK SVRGKMNPEGAVLMTVGDSRYADVLIDVGDILRELAEGAGYVCEAVTPIRAMKTSAQQGWQASLSEDLVRLRPA >Mature_474_residues MNISLHNIQLDGTLQDYLYAVAQQTGGLRDMKAAAISTFIEENCPELGATERRNFSSWLKDVVDGVPISSNMPSHNLPFQ RWYRFKEAFSPLMVAESLSCLGFWPSTCLDCFGGSGTTALTCQFLGIESTSIEVNPFLADLIEAKLSKYDHASLIDDFAG VVKKMSTRSATLRSIRYESWPATMVEPGLKDRWIFPRETFRRILTIREAIDEITNPVNQRLLRVLLGSILIDMSNVVISG KGRRYRSNWQATQKSPRDVSVAFQAAFQAALFDISAHGARACESYRLLRGDSRVEVDKVGQVDVALFSPPYPNSFDYTDI YNVELWVLGYLKSRADNTELRSSTLRSHVQIHRDMSWEGLDSRKLRQTVKALTKRRAQLWDPHLPDMIGAYFADLVQILK SVRGKMNPEGAVLMTVGDSRYADVLIDVGDILRELAEGAGYVCEAVTPIRAMKTSAQQGWQASLSEDLVRLRPA
Specific function: Unknown
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53194; Mature: 53194
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISLHNIQLDGTLQDYLYAVAQQTGGLRDMKAAAISTFIEENCPELGATERRNFSSWLK CCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH DVVDGVPISSNMPSHNLPFQRWYRFKEAFSPLMVAESLSCLGFWPSTCLDCFGGSGTTAL HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEE TCQFLGIESTSIEVNPFLADLIEAKLSKYDHASLIDDFAGVVKKMSTRSATLRSIRYESW EEEEEECCCCCEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PATMVEPGLKDRWIFPRETFRRILTIREAIDEITNPVNQRLLRVLLGSILIDMSNVVISG CCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEC KGRRYRSNWQATQKSPRDVSVAFQAAFQAALFDISAHGARACESYRLLRGDSRVEVDKVG CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCCC QVDVALFSPPYPNSFDYTDIYNVELWVLGYLKSRADNTELRSSTLRSHVQIHRDMSWEGL CEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC DSRKLRQTVKALTKRRAQLWDPHLPDMIGAYFADLVQILKSVRGKMNPEGAVLMTVGDSR CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC YADVLIDVGDILRELAEGAGYVCEAVTPIRAMKTSAQQGWQASLSEDLVRLRPA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC >Mature Secondary Structure MNISLHNIQLDGTLQDYLYAVAQQTGGLRDMKAAAISTFIEENCPELGATERRNFSSWLK CCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH DVVDGVPISSNMPSHNLPFQRWYRFKEAFSPLMVAESLSCLGFWPSTCLDCFGGSGTTAL HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEE TCQFLGIESTSIEVNPFLADLIEAKLSKYDHASLIDDFAGVVKKMSTRSATLRSIRYESW EEEEEECCCCCEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PATMVEPGLKDRWIFPRETFRRILTIREAIDEITNPVNQRLLRVLLGSILIDMSNVVISG CCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEC KGRRYRSNWQATQKSPRDVSVAFQAAFQAALFDISAHGARACESYRLLRGDSRVEVDKVG CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCCC QVDVALFSPPYPNSFDYTDIYNVELWVLGYLKSRADNTELRSSTLRSHVQIHRDMSWEGL CEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC DSRKLRQTVKALTKRRAQLWDPHLPDMIGAYFADLVQILKSVRGKMNPEGAVLMTVGDSR CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC YADVLIDVGDILRELAEGAGYVCEAVTPIRAMKTSAQQGWQASLSEDLVRLRPA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA