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The map label for this gene is yjnA [H]

Identifier: 94311749

GI number: 94311749

Start: 3064686

End: 3065459

Strand: Reverse

Name: yjnA [H]

Synonym: Rmet_2817

Alternate gene names: 94311749

Gene position: 3065459-3064686 (Counterclockwise)

Preceding gene: 94311754

Following gene: 94311748

Centisome position: 78.04

GC content: 67.96

Gene sequence:

>774_bases
ATGTCCCTTGCCTATACCGTTTCCGGTCTGCTGGTAGGTCTCCTGGTCGGTCTGACCGGAGTCGGCGGGGGTTCGCTCAT
GACGCCGCTGCTGACGCTGCTGTTCGGCTTCTCGCCGGCCACTGCGGTGGGCACTGACCTGGCGTTTGCCTCGATTACCA
AGGGCTTCGGCACGCTGGCCCACCGGGCGCACGGCCATGTGCAGTGGCAGGTGGTGCGCCGCCTGTGCGTGGGCAGCCTG
CCGGCCGCCGTGGCCGCCATCCTCGTGCTCAAGAGCGCGGGTGAACTCAATGCGCAGTGGCTCCACGCGATCCGCGTGAC
GATCGGTGTGTCGGTCCTGCTGACCGTGCTGTCGCTGCTGTTCCGCAAGCAGATGCTGGCCTGGCTGGCGCGCAACCCGC
GCTTCCAGCTCGAAGGCCGCAAGCAGGTGGTGGCCACCGTGCTGGTGGGCGCCGTGATCGGCGTGCTGGTGACGGTGTCG
TCGATCGGTGCCGGCGCCGTGGGCGCGACGCTGATCCTGCTGCTGTATCCCCATATGAAACCGGCCGAAGTGGCCGGTAC
CGATATCGCCTACGCCGTGCCGCTCACGGCCGTGGCAGGGCTGGGCCACGTGTGGCTCGGCACGGTCGACTGGAATTTGT
TGCTGGCGCTGCTGGTGGGCTCGATCCCCGGCATCTGGCTCGGTGCGCAACTGTCGCGGGCACTGCCCGAGCGGATCGTG
CGCGCCGCACTTGCCACGACGCTGACGCTCGTGGCCATCAAGCTCGTTTCATGA

Upstream 100 bases:

>100_bases
ACTTTGTTAAACGTTCGGCCTGCCCGTATTGCGTCCAGCCCCCAGCCTGTATAGGTGACGCGGACGAGGGGAAAGCCGGG
CAACTCGAGAATCCCCCCCG

Downstream 100 bases:

>100_bases
GACCGGTTATGAATGATTCAGGCGTCGTTACACGGCCTTGCCAGAACCGCTTCGCTTCATTCCTGACCAGCCTCCCTAAA
GTTACCGAATACTGAACGGA

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSLAYTVSGLLVGLLVGLTGVGGGSLMTPLLTLLFGFSPATAVGTDLAFASITKGFGTLAHRAHGHVQWQVVRRLCVGSL
PAAVAAILVLKSAGELNAQWLHAIRVTIGVSVLLTVLSLLFRKQMLAWLARNPRFQLEGRKQVVATVLVGAVIGVLVTVS
SIGAGAVGATLILLLYPHMKPAEVAGTDIAYAVPLTAVAGLGHVWLGTVDWNLLLALLVGSIPGIWLGAQLSRALPERIV
RAALATTLTLVAIKLVS

Sequences:

>Translated_257_residues
MSLAYTVSGLLVGLLVGLTGVGGGSLMTPLLTLLFGFSPATAVGTDLAFASITKGFGTLAHRAHGHVQWQVVRRLCVGSL
PAAVAAILVLKSAGELNAQWLHAIRVTIGVSVLLTVLSLLFRKQMLAWLARNPRFQLEGRKQVVATVLVGAVIGVLVTVS
SIGAGAVGATLILLLYPHMKPAEVAGTDIAYAVPLTAVAGLGHVWLGTVDWNLLLALLVGSIPGIWLGAQLSRALPERIV
RAALATTLTLVAIKLVS
>Mature_256_residues
SLAYTVSGLLVGLLVGLTGVGGGSLMTPLLTLLFGFSPATAVGTDLAFASITKGFGTLAHRAHGHVQWQVVRRLCVGSLP
AAVAAILVLKSAGELNAQWLHAIRVTIGVSVLLTVLSLLFRKQMLAWLARNPRFQLEGRKQVVATVLVGAVIGVLVTVSS
IGAGAVGATLILLLYPHMKPAEVAGTDIAYAVPLTAVAGLGHVWLGTVDWNLLLALLVGSIPGIWLGAQLSRALPERIVR
AALATTLTLVAIKLVS

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26636; Mature: 26505

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAYTVSGLLVGLLVGLTGVGGGSLMTPLLTLLFGFSPATAVGTDLAFASITKGFGTLA
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
HRAHGHVQWQVVRRLCVGSLPAAVAAILVLKSAGELNAQWLHAIRVTIGVSVLLTVLSLL
HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FRKQMLAWLARNPRFQLEGRKQVVATVLVGAVIGVLVTVSSIGAGAVGATLILLLYPHMK
HHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PAEVAGTDIAYAVPLTAVAGLGHVWLGTVDWNLLLALLVGSIPGIWLGAQLSRALPERIV
CHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RAALATTLTLVAIKLVS
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLAYTVSGLLVGLLVGLTGVGGGSLMTPLLTLLFGFSPATAVGTDLAFASITKGFGTLA
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
HRAHGHVQWQVVRRLCVGSLPAAVAAILVLKSAGELNAQWLHAIRVTIGVSVLLTVLSLL
HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FRKQMLAWLARNPRFQLEGRKQVVATVLVGAVIGVLVTVSSIGAGAVGATLILLLYPHMK
HHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PAEVAGTDIAYAVPLTAVAGLGHVWLGTVDWNLLLALLVGSIPGIWLGAQLSRALPERIV
CHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RAALATTLTLVAIKLVS
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]