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The map label for this gene is ytfM [H]

Identifier: 94311704

GI number: 94311704

Start: 3018086

End: 3020176

Strand: Reverse

Name: ytfM [H]

Synonym: Rmet_2772

Alternate gene names: 94311704

Gene position: 3020176-3018086 (Counterclockwise)

Preceding gene: 94311707

Following gene: 94311703

Centisome position: 76.89

GC content: 65.18

Gene sequence:

>2091_bases
ATGGCCATGGTGAAACCTTGTGCCCTCTGGGCGGCGTTGGGGATGTTGGGGCTGGATTTTACCGTATTGGAGGCCGCTAA
AAGAATTTTGAAATTTGGTGTCGGACTGACGTGGCTCTTGCGGCGGTGTGGTCAAATAGCGACTTTGCGGGTAGACACCG
ACAGGATGAGGATTGACTTGGGCCACCTGGCCGGAATGGTCGCTGCTGGCAGGACGCCGACTAGCCACCGGAGTGCCGGG
CGGGTTGCGCGTCTGGCCGGGCTCGTCCTGACGTTCCTGCTGGCCCTGCACGCGCCCCTCGGCCATGCCGCCAAGGCGGC
CTACAAGGTGGAGATCGACGCGCCGGATGCGCTCAAGGGCATCCTGCAGGAACACCTCGATCTGGCCCGCTACACCGATC
GCACCGACATTTCCGACGACCAGTTCCAGTACATGGTGGAGACCGTGGACGACCAGGTGCGTCAGTTCGCGTCCACCGAG
GGCTGGTTCGATCCGGTGACCAAGGCCACCGTGGAAGGTGAGGGCGACAAACGGGTGGTCCACATTTCGGTCGATCCCGG
CGCGCGCACGCTGATCCGCGCCGTGGATGTGCAGGTGACCGGCCCGGCCGCCACGCAGTCGCCTGAGCAGGTGGAGCAGA
TGCGCGCCAAGTGGGGATTGCCCGTTGGCGAACCGTTCCGGCAGTCCACCTGGGACAAGGCCAAGGAAGACGCGCTCGTG
ACGCTGCAGAGCCGCAGCTACTATGGTGCGAAGCTGGCCGCGTCGCGCGCGCGGGTCGAACCCGACGAACAGGCCGCCGA
TCTGTCCGCCCGGTATGAGAGCGGGCCTGCCTATATCCTCGGTCCGCTGGTGGTCGAGGGCACACGCCGCTATCCGGAGC
AGATCGTCCGCAACGTGAACCCGCTGAACGTTGGTGAGCCATATCGCGTGGAGCGGCTGCTCGAACTGCAGCGCGCGGTC
CAGAACCAGCCTTATTTCTCGAACGTGCAGGTCGACCTGGTGGAGCCGGCCGATGCCGTGGCCGAGGCCAAGGGCGAAGC
AGGGACAGCCTCCGATGCCGCGACCGAGGCCGATGGCGCGACGACGACCACCAAGACCACCAAGGCCACGCAGCCCGATA
CCATCACGACCCCGGTGCGCGTGCGGGTGCGCGAGCAACCGCTGCATCGCCTCAATACCGGCGTCGGTTACACGACTGAC
ACTGGCGCGCAGGTGAGCGGGCGGTACTCCTATTACAACCTGTTCAATCGCGCGTGGGTATTTGACTCCCAACTCAGCAT
CGAACAGAAGCGCCAGTACGCCTATCTGGAAACGGCGATGCCGCCCGACACGCGTACCTTCCGCAACAGTATCTACGGCA
GCTACGAACGCACGATCGACGTCGAAAGCACCGATCTGACGAGCTGGCGCGCGGGTCTGAAGCGCTCGCGCTCGCGCGAC
AAGTACGACACCACGTTCTCGCTGGATTTCTACTACGACAACCTGTTGCCGTTCGGGGAACCGGCGCAGATCTCCAAGGC
ACTGGTGCCGGCGTTCGCCTGGACGCGCCGCGATGTGGACAACCCCGTGTTTCCGCGCCGGGGCAACGTGATCAGCACGC
AGATCGGCGTGGCGGGCAAGGGCTTCCTGAGCGATGCCACGTTCCTGCGTCTCTATGGCCGTATCCGGCAGTACATGCCC
GTGGGCAACCGCGACCTGTTCGTGGCCCGCCTGGAACTCGGCGCGGATCTGACCAAGGCCGATCCGGCGCAGGTGCCGGC
GTCGCTGCGGTTCCGGGCCGGTGGTACCGACTCGATCCGCGGCTACAGCTTCCAGTCGATCGGCACGCCCGAGGGCGCCG
CCGTGGTGCCGGCGCGCTACTTGGGCACCGGCAGCCTCGAATACCAGCACTGGTTCAAGCCGGACTGGGGTTTCGCCGTG
TTCTGGGACGCGGGTACAGCGTCGAACAGCATCAAGGGTGTCACGATCTATAACGGCGTCGGCGTGGGCGCGCGCTGGCG
CAGCCCGGTGGGCCCGGTGCAGCTCGATGTCGGTTACGGCATCCAGCAGAAGCAGTTCCGTCCGCATATCTCATTGGGAG
TGGCGTTCTGA

Upstream 100 bases:

>100_bases
CTTGTCCCACAGCAGGGCACGGCCTTCGCGCTGTTCAGCGTCCAGGGACGGGCGCTCCTGCTTGAGCGTCTTCAGGAACT
GGGTGATATCCGATTCGTAC

Downstream 100 bases:

>100_bases
TGAGTATCCCGGACATGCCCCCTGTCCCGCGCGAGACGCCGAATGCGCCGCGACCACTACGTCCTCGCCGCCGCGTGTGG
CGTGTGCTGGCATGGATCGT

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 696; Mature: 695

Protein sequence:

>696_residues
MAMVKPCALWAALGMLGLDFTVLEAAKRILKFGVGLTWLLRRCGQIATLRVDTDRMRIDLGHLAGMVAAGRTPTSHRSAG
RVARLAGLVLTFLLALHAPLGHAAKAAYKVEIDAPDALKGILQEHLDLARYTDRTDISDDQFQYMVETVDDQVRQFASTE
GWFDPVTKATVEGEGDKRVVHISVDPGARTLIRAVDVQVTGPAATQSPEQVEQMRAKWGLPVGEPFRQSTWDKAKEDALV
TLQSRSYYGAKLAASRARVEPDEQAADLSARYESGPAYILGPLVVEGTRRYPEQIVRNVNPLNVGEPYRVERLLELQRAV
QNQPYFSNVQVDLVEPADAVAEAKGEAGTASDAATEADGATTTTKTTKATQPDTITTPVRVRVREQPLHRLNTGVGYTTD
TGAQVSGRYSYYNLFNRAWVFDSQLSIEQKRQYAYLETAMPPDTRTFRNSIYGSYERTIDVESTDLTSWRAGLKRSRSRD
KYDTTFSLDFYYDNLLPFGEPAQISKALVPAFAWTRRDVDNPVFPRRGNVISTQIGVAGKGFLSDATFLRLYGRIRQYMP
VGNRDLFVARLELGADLTKADPAQVPASLRFRAGGTDSIRGYSFQSIGTPEGAAVVPARYLGTGSLEYQHWFKPDWGFAV
FWDAGTASNSIKGVTIYNGVGVGARWRSPVGPVQLDVGYGIQQKQFRPHISLGVAF

Sequences:

>Translated_696_residues
MAMVKPCALWAALGMLGLDFTVLEAAKRILKFGVGLTWLLRRCGQIATLRVDTDRMRIDLGHLAGMVAAGRTPTSHRSAG
RVARLAGLVLTFLLALHAPLGHAAKAAYKVEIDAPDALKGILQEHLDLARYTDRTDISDDQFQYMVETVDDQVRQFASTE
GWFDPVTKATVEGEGDKRVVHISVDPGARTLIRAVDVQVTGPAATQSPEQVEQMRAKWGLPVGEPFRQSTWDKAKEDALV
TLQSRSYYGAKLAASRARVEPDEQAADLSARYESGPAYILGPLVVEGTRRYPEQIVRNVNPLNVGEPYRVERLLELQRAV
QNQPYFSNVQVDLVEPADAVAEAKGEAGTASDAATEADGATTTTKTTKATQPDTITTPVRVRVREQPLHRLNTGVGYTTD
TGAQVSGRYSYYNLFNRAWVFDSQLSIEQKRQYAYLETAMPPDTRTFRNSIYGSYERTIDVESTDLTSWRAGLKRSRSRD
KYDTTFSLDFYYDNLLPFGEPAQISKALVPAFAWTRRDVDNPVFPRRGNVISTQIGVAGKGFLSDATFLRLYGRIRQYMP
VGNRDLFVARLELGADLTKADPAQVPASLRFRAGGTDSIRGYSFQSIGTPEGAAVVPARYLGTGSLEYQHWFKPDWGFAV
FWDAGTASNSIKGVTIYNGVGVGARWRSPVGPVQLDVGYGIQQKQFRPHISLGVAF
>Mature_695_residues
AMVKPCALWAALGMLGLDFTVLEAAKRILKFGVGLTWLLRRCGQIATLRVDTDRMRIDLGHLAGMVAAGRTPTSHRSAGR
VARLAGLVLTFLLALHAPLGHAAKAAYKVEIDAPDALKGILQEHLDLARYTDRTDISDDQFQYMVETVDDQVRQFASTEG
WFDPVTKATVEGEGDKRVVHISVDPGARTLIRAVDVQVTGPAATQSPEQVEQMRAKWGLPVGEPFRQSTWDKAKEDALVT
LQSRSYYGAKLAASRARVEPDEQAADLSARYESGPAYILGPLVVEGTRRYPEQIVRNVNPLNVGEPYRVERLLELQRAVQ
NQPYFSNVQVDLVEPADAVAEAKGEAGTASDAATEADGATTTTKTTKATQPDTITTPVRVRVREQPLHRLNTGVGYTTDT
GAQVSGRYSYYNLFNRAWVFDSQLSIEQKRQYAYLETAMPPDTRTFRNSIYGSYERTIDVESTDLTSWRAGLKRSRSRDK
YDTTFSLDFYYDNLLPFGEPAQISKALVPAFAWTRRDVDNPVFPRRGNVISTQIGVAGKGFLSDATFLRLYGRIRQYMPV
GNRDLFVARLELGADLTKADPAQVPASLRFRAGGTDSIRGYSFQSIGTPEGAAVVPARYLGTGSLEYQHWFKPDWGFAVF
WDAGTASNSIKGVTIYNGVGVGARWRSPVGPVQLDVGYGIQQKQFRPHISLGVAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=624, Percent_Identity=25.4807692307692, Blast_Score=122, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 76809; Mature: 76677

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMVKPCALWAALGMLGLDFTVLEAAKRILKFGVGLTWLLRRCGQIATLRVDTDRMRIDL
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCHHEEEH
GHLAGMVAAGRTPTSHRSAGRVARLAGLVLTFLLALHAPLGHAAKAAYKVEIDAPDALKG
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEEECCCHHHHH
ILQEHLDLARYTDRTDISDDQFQYMVETVDDQVRQFASTEGWFDPVTKATVEGEGDKRVV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCEEE
HISVDPGARTLIRAVDVQVTGPAATQSPEQVEQMRAKWGLPVGEPFRQSTWDKAKEDALV
EEEECCCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEE
TLQSRSYYGAKLAASRARVEPDEQAADLSARYESGPAYILGPLVVEGTRRYPEQIVRNVN
EEECCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECEEECCCCCCHHHHHHCCC
PLNVGEPYRVERLLELQRAVQNQPYFSNVQVDLVEPADAVAEAKGEAGTASDAATEADGA
CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCC
TTTTKTTKATQPDTITTPVRVRVREQPLHRLNTGVGYTTDTGAQVSGRYSYYNLFNRAWV
CCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEE
FDSQLSIEQKRQYAYLETAMPPDTRTFRNSIYGSYERTIDVESTDLTSWRAGLKRSRSRD
ECCCCCHHHHHHHEEEECCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCC
KYDTTFSLDFYYDNLLPFGEPAQISKALVPAFAWTRRDVDNPVFPRRGNVISTQIGVAGK
CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
GFLSDATFLRLYGRIRQYMPVGNRDLFVARLELGADLTKADPAQVPASLRFRAGGTDSIR
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHCCCEEEEECCCCCCCC
GYSFQSIGTPEGAAVVPARYLGTGSLEYQHWFKPDWGFAVFWDAGTASNSIKGVTIYNGV
CEEECCCCCCCCCEECCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCC
GVGARWRSPVGPVQLDVGYGIQQKQFRPHISLGVAF
CCCCCCCCCCCCEEEECCCCCCHHHCCCCEEEEECC
>Mature Secondary Structure 
AMVKPCALWAALGMLGLDFTVLEAAKRILKFGVGLTWLLRRCGQIATLRVDTDRMRIDL
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCHHEEEH
GHLAGMVAAGRTPTSHRSAGRVARLAGLVLTFLLALHAPLGHAAKAAYKVEIDAPDALKG
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEEECCCHHHHH
ILQEHLDLARYTDRTDISDDQFQYMVETVDDQVRQFASTEGWFDPVTKATVEGEGDKRVV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCEEE
HISVDPGARTLIRAVDVQVTGPAATQSPEQVEQMRAKWGLPVGEPFRQSTWDKAKEDALV
EEEECCCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEE
TLQSRSYYGAKLAASRARVEPDEQAADLSARYESGPAYILGPLVVEGTRRYPEQIVRNVN
EEECCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECEEECCCCCCHHHHHHCCC
PLNVGEPYRVERLLELQRAVQNQPYFSNVQVDLVEPADAVAEAKGEAGTASDAATEADGA
CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCC
TTTTKTTKATQPDTITTPVRVRVREQPLHRLNTGVGYTTDTGAQVSGRYSYYNLFNRAWV
CCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEE
FDSQLSIEQKRQYAYLETAMPPDTRTFRNSIYGSYERTIDVESTDLTSWRAGLKRSRSRD
ECCCCCHHHHHHHEEEECCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCC
KYDTTFSLDFYYDNLLPFGEPAQISKALVPAFAWTRRDVDNPVFPRRGNVISTQIGVAGK
CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
GFLSDATFLRLYGRIRQYMPVGNRDLFVARLELGADLTKADPAQVPASLRFRAGGTDSIR
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHCCCEEEEECCCCCCCC
GYSFQSIGTPEGAAVVPARYLGTGSLEYQHWFKPDWGFAVFWDAGTASNSIKGVTIYNGV
CEEECCCCCCCCCEECCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCC
GVGARWRSPVGPVQLDVGYGIQQKQFRPHISLGVAF
CCCCCCCCCCCCEEEECCCCCCHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]