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The map label for this gene is rfbE [H]

Identifier: 94311663

GI number: 94311663

Start: 2966585

End: 2967844

Strand: Reverse

Name: rfbE [H]

Synonym: Rmet_2731

Alternate gene names: 94311663

Gene position: 2967844-2966585 (Counterclockwise)

Preceding gene: 94311664

Following gene: 94311662

Centisome position: 75.55

GC content: 56.03

Gene sequence:

>1260_bases
ATGCGTGCCTCACATATCTCATGGAATTTGTTTGGCCTTGGGCTGCCGCTGCTGATTGCAGCAGTGACCGTTCCTCACCT
CCTTTCCGGGCTAGGGAGTCAGCGATTCGGCTTGCTTGCACTGGCATGGGGCCTCATCGGCTACGCGGGAGCTCTTGACC
TGGGTATTGGCCGGGCGACTACCCAACGCGTGGCAGCGCTGCGCAGCGGAGGTCAGGAGGCAGTTATTCCACACGTCGTA
GCTACAGCCACGCGTCTGACGTTGGTGACTGGTGGCATCGGCATGGTGCTGATCATAGTCAGCGCCATATTAGGAGTTGG
CGAGCTGGTGCATGCGAATGATGTGCCACAAGCAGAGATCCGATCGGCCGTCCTGATGCTTGGCCTCGCTCTGCCGATGC
AGGCCGTGAGTGCGACATATCGTGGTGTAAGTGAAGCCTATCTGAGCTTCAGAAATATCAGTGTGCTGCGTATTTTGCTT
GGTGCGGCGAATTTCGGCATCCCATACCTGATTGCGCTCTTCTCTACCCGAGTGGATTTGCTTATTGCAAGCCTCGTGGT
CTCGCGAGCGATTGCGCTCTGGTTCTATCGTATTTTTGCGCTGCAGTGTCTGTCATCCGGTGACACTCGCGGTACATATT
CGCGCAAGCTCGCGCATCAGCTGTTCCAGTTTGGTGGCTGGTACACGGTAAGCAGCATCCTGGGTCCATTGATGACCCAA
GCTGATCGGTTCCTGATTGCTGCAATTCTAGGTGCCGCTGCGGTGACGACATATGTCATTCCGTATGAAGTGACTGTGCA
GACGCTGATTCTCTCGGGTGCAGTAACTACCGTTGCGTTCCCTGCGATCAGCCGCATGCTGGTTAATGATCCTGATGGCG
CAGCCCTGCTGTTTCGCCGATGGCTACTGCGAGTCTCAGGGGCGATGGCGATTGGCCTGATAATCTTGGCGATCATCCTT
CCAGGTTTGCTCACTCTGTGGCTTCGCCATCCTGCGGATCCGGCATCGGTGATGGTCGGTCGGATTCTCTGCATTGGCGT
GCTGGCCAATGCCATTGGATCGATGTACTTCGCGCTACTTCAAGCAAAGAGAAGGACGCGTGCGACTGCGATGCTCCATT
TGGTAGAAGTGCCTCTCTATTTGTGCGCGCTGGTGGCTCTGACCAAACTATTCGGAGTAACCGGAGCTGCCGCCGCATGG
TCTTTGCGCATGTGTTTCGACGCATCCGGCATGAAAATTCTGGTGAGGCAGGCAAAGTGA

Upstream 100 bases:

>100_bases
TTGTTTGGACCGGGTACGAGCATTGCTCAGCGATGCTTGTCCGATGTTAGTTTCTGCGTTCTGTGTCTCACGATTGGCGT
GGGGCGCAAATGTGACATAG

Downstream 100 bases:

>100_bases
GCGAGAAAGCGCACGGACGAGCGGAGCAGGCGGCTGGACTTGGTTTCCTAGTGGTCATAGCCATAATTCTGGGTGCGGCG
GCTGGTATTTTCGGAAGTTC

Product: Polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MRASHISWNLFGLGLPLLIAAVTVPHLLSGLGSQRFGLLALAWGLIGYAGALDLGIGRATTQRVAALRSGGQEAVIPHVV
ATATRLTLVTGGIGMVLIIVSAILGVGELVHANDVPQAEIRSAVLMLGLALPMQAVSATYRGVSEAYLSFRNISVLRILL
GAANFGIPYLIALFSTRVDLLIASLVVSRAIALWFYRIFALQCLSSGDTRGTYSRKLAHQLFQFGGWYTVSSILGPLMTQ
ADRFLIAAILGAAAVTTYVIPYEVTVQTLILSGAVTTVAFPAISRMLVNDPDGAALLFRRWLLRVSGAMAIGLIILAIIL
PGLLTLWLRHPADPASVMVGRILCIGVLANAIGSMYFALLQAKRRTRATAMLHLVEVPLYLCALVALTKLFGVTGAAAAW
SLRMCFDASGMKILVRQAK

Sequences:

>Translated_419_residues
MRASHISWNLFGLGLPLLIAAVTVPHLLSGLGSQRFGLLALAWGLIGYAGALDLGIGRATTQRVAALRSGGQEAVIPHVV
ATATRLTLVTGGIGMVLIIVSAILGVGELVHANDVPQAEIRSAVLMLGLALPMQAVSATYRGVSEAYLSFRNISVLRILL
GAANFGIPYLIALFSTRVDLLIASLVVSRAIALWFYRIFALQCLSSGDTRGTYSRKLAHQLFQFGGWYTVSSILGPLMTQ
ADRFLIAAILGAAAVTTYVIPYEVTVQTLILSGAVTTVAFPAISRMLVNDPDGAALLFRRWLLRVSGAMAIGLIILAIIL
PGLLTLWLRHPADPASVMVGRILCIGVLANAIGSMYFALLQAKRRTRATAMLHLVEVPLYLCALVALTKLFGVTGAAAAW
SLRMCFDASGMKILVRQAK
>Mature_419_residues
MRASHISWNLFGLGLPLLIAAVTVPHLLSGLGSQRFGLLALAWGLIGYAGALDLGIGRATTQRVAALRSGGQEAVIPHVV
ATATRLTLVTGGIGMVLIIVSAILGVGELVHANDVPQAEIRSAVLMLGLALPMQAVSATYRGVSEAYLSFRNISVLRILL
GAANFGIPYLIALFSTRVDLLIASLVVSRAIALWFYRIFALQCLSSGDTRGTYSRKLAHQLFQFGGWYTVSSILGPLMTQ
ADRFLIAAILGAAAVTTYVIPYEVTVQTLILSGAVTTVAFPAISRMLVNDPDGAALLFRRWLLRVSGAMAIGLIILAIIL
PGLLTLWLRHPADPASVMVGRILCIGVLANAIGSMYFALLQAKRRTRATAMLHLVEVPLYLCALVALTKLFGVTGAAAAW
SLRMCFDASGMKILVRQAK

Specific function: Could be an O-antigen transporter [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 44572; Mature: 44572

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASHISWNLFGLGLPLLIAAVTVPHLLSGLGSQRFGLLALAWGLIGYAGALDLGIGRAT
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
TQRVAALRSGGQEAVIPHVVATATRLTLVTGGIGMVLIIVSAILGVGELVHANDVPQAEI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCCCCCHHHH
RSAVLMLGLALPMQAVSATYRGVSEAYLSFRNISVLRILLGAANFGIPYLIALFSTRVDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LIASLVVSRAIALWFYRIFALQCLSSGDTRGTYSRKLAHQLFQFGGWYTVSSILGPLMTQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ADRFLIAAILGAAAVTTYVIPYEVTVQTLILSGAVTTVAFPAISRMLVNDPDGAALLFRR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
WLLRVSGAMAIGLIILAIILPGLLTLWLRHPADPASVMVGRILCIGVLANAIGSMYFALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAKRRTRATAMLHLVEVPLYLCALVALTKLFGVTGAAAAWSLRMCFDASGMKILVRQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEHEECCC
>Mature Secondary Structure
MRASHISWNLFGLGLPLLIAAVTVPHLLSGLGSQRFGLLALAWGLIGYAGALDLGIGRAT
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
TQRVAALRSGGQEAVIPHVVATATRLTLVTGGIGMVLIIVSAILGVGELVHANDVPQAEI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCCCCCHHHH
RSAVLMLGLALPMQAVSATYRGVSEAYLSFRNISVLRILLGAANFGIPYLIALFSTRVDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LIASLVVSRAIALWFYRIFALQCLSSGDTRGTYSRKLAHQLFQFGGWYTVSSILGPLMTQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ADRFLIAAILGAAAVTTYVIPYEVTVQTLILSGAVTTVAFPAISRMLVNDPDGAALLFRR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
WLLRVSGAMAIGLIILAIILPGLLTLWLRHPADPASVMVGRILCIGVLANAIGSMYFALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAKRRTRATAMLHLVEVPLYLCALVALTKLFGVTGAAAAWSLRMCFDASGMKILVRQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]