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The map label for this gene is spsC [H]

Identifier: 94311656

GI number: 94311656

Start: 2959844

End: 2961019

Strand: Reverse

Name: spsC [H]

Synonym: Rmet_2724

Alternate gene names: 94311656

Gene position: 2961019-2959844 (Counterclockwise)

Preceding gene: 94311657

Following gene: 94311655

Centisome position: 75.38

GC content: 58.84

Gene sequence:

>1176_bases
ATGCTGAACACTTCATTTTCTCCGTGGCCTAGTTTCACCAAGGAAGAGGCGGACGCAGTCCAGCAGGTGTTGCTCTCTAA
TAAGGTGAACTATTGGACCGGCACGGAATGTCGCGAGTTCGAGAAAGAGTTTGCCGCATGGACGGGTACACGCCACGCCA
TCGCGCTCAGTAATGGCACATTGGCTTTGGACTTGGCGCTAAAGGGGCTTGGAATCGGGCCTGGCGATGAAGTCATCGTC
ACACCGCGCACGTTCATCGCCAGCGCGTCCTGCGTAGTCAACGCTGGTGCGATTCCGGTTTTCGCCGATGTCGATCCGGA
AAGCGGAAACCTTTCGGCGGAGACCATTGCGAGAGTCCTGACGCCGCGCACCAAAGCAGTGATCTGCGTGCACCTTGCGG
GGTGGCCATGCGACATGGATCCCATCATGGAGTTGGCGGCCCGCCATGGATTGAAGGTCATCGAGGATTGTGCACAGGCA
CACGGCGCTCGCTACAAGGGGCGTAGTGTCGGATCGATCGGACACGTCGGTGCATGGAGCTTCTGCCAGGACAAGATCAT
GACCACGGGTGGTGAAGGTGGCATGGTGACGCTCAATGATGAAGCGCTCTGGCGCGAGATGTGGGCGTACAAGGACCACG
GCAAGAGCTTTGAGGCGGTGTACGAGCGTGAGCACGCACCGGGGTTTCGCTGGTTGCATGAGACCTTCGGCACCAACTGG
CGAATGCTGGAGATGCAGGCCGTAATCGGACGTATTCAACTGCGCCGCATGACGGAGTGGACCGCTCGACGGACTGAACA
CGCCGAGGCAATTCATTCGGCCTGCAAACCATTCTCTGCCGTGCGTGTGCCTGTCGCTCCGGCGAGCAGCACCCACGCGC
AATACAAATGCTATGTGTATGTCCGACCTGACCACTTGGCGGAAGGCTGGACGCGTGACCGAATCATTCAGACGATTGTC
GATGCCGACGTGCCCTGTTATCAGGGCTCTTGTTCCGAGGTCTACCTTGAAAAGGCGTTTGACGATACTGGCTGGCGACC
GGCCGAGCGGCTACCGATCGCACGCGCAATGGGCGAGGACAGCCTGATGTTCCTTGTACATCCCACCTTGACCAAGGATG
AGATTGCAAAGACATGCCGTGTGCTGACTGACGTCCTCGGGCGGGCCAGCCGGTGA

Upstream 100 bases:

>100_bases
ACAGTGATGGGTTGTCCCGCACGGGAGCAGAGAGTCTAGGCGACTCTTGGGAACCTATAATACAGTTGAAGAAAATATCA
TCTGATTTCTAATTCTACTT

Downstream 100 bases:

>100_bases
AGAATCTTACGGTTCCGCTACTCGCGCTGCCCCGGTCGGCCAAGCGCGTGGTTGTCGTTGCGCTGGATTTGATCCTGGCG
CTGGTATCCGTCTGGGTGGC

Product: DegT/DnrJ/EryC1/StrS family aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MLNTSFSPWPSFTKEEADAVQQVLLSNKVNYWTGTECREFEKEFAAWTGTRHAIALSNGTLALDLALKGLGIGPGDEVIV
TPRTFIASASCVVNAGAIPVFADVDPESGNLSAETIARVLTPRTKAVICVHLAGWPCDMDPIMELAARHGLKVIEDCAQA
HGARYKGRSVGSIGHVGAWSFCQDKIMTTGGEGGMVTLNDEALWREMWAYKDHGKSFEAVYEREHAPGFRWLHETFGTNW
RMLEMQAVIGRIQLRRMTEWTARRTEHAEAIHSACKPFSAVRVPVAPASSTHAQYKCYVYVRPDHLAEGWTRDRIIQTIV
DADVPCYQGSCSEVYLEKAFDDTGWRPAERLPIARAMGEDSLMFLVHPTLTKDEIAKTCRVLTDVLGRASR

Sequences:

>Translated_391_residues
MLNTSFSPWPSFTKEEADAVQQVLLSNKVNYWTGTECREFEKEFAAWTGTRHAIALSNGTLALDLALKGLGIGPGDEVIV
TPRTFIASASCVVNAGAIPVFADVDPESGNLSAETIARVLTPRTKAVICVHLAGWPCDMDPIMELAARHGLKVIEDCAQA
HGARYKGRSVGSIGHVGAWSFCQDKIMTTGGEGGMVTLNDEALWREMWAYKDHGKSFEAVYEREHAPGFRWLHETFGTNW
RMLEMQAVIGRIQLRRMTEWTARRTEHAEAIHSACKPFSAVRVPVAPASSTHAQYKCYVYVRPDHLAEGWTRDRIIQTIV
DADVPCYQGSCSEVYLEKAFDDTGWRPAERLPIARAMGEDSLMFLVHPTLTKDEIAKTCRVLTDVLGRASR
>Mature_391_residues
MLNTSFSPWPSFTKEEADAVQQVLLSNKVNYWTGTECREFEKEFAAWTGTRHAIALSNGTLALDLALKGLGIGPGDEVIV
TPRTFIASASCVVNAGAIPVFADVDPESGNLSAETIARVLTPRTKAVICVHLAGWPCDMDPIMELAARHGLKVIEDCAQA
HGARYKGRSVGSIGHVGAWSFCQDKIMTTGGEGGMVTLNDEALWREMWAYKDHGKSFEAVYEREHAPGFRWLHETFGTNW
RMLEMQAVIGRIQLRRMTEWTARRTEHAEAIHSACKPFSAVRVPVAPASSTHAQYKCYVYVRPDHLAEGWTRDRIIQTIV
DADVPCYQGSCSEVYLEKAFDDTGWRPAERLPIARAMGEDSLMFLVHPTLTKDEIAKTCRVLTDVLGRASR

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=323, Percent_Identity=34.0557275541796, Blast_Score=157, Evalue=8e-40,
Organism=Escherichia coli, GI2367285, Length=299, Percent_Identity=31.1036789297659, Blast_Score=144, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43388; Mature: 43388

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNTSFSPWPSFTKEEADAVQQVLLSNKVNYWTGTECREFEKEFAAWTGTRHAIALSNGT
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
LALDLALKGLGIGPGDEVIVTPRTFIASASCVVNAGAIPVFADVDPESGNLSAETIARVL
EEEEEEEECCCCCCCCCEEECCHHHHHCCHHEEECCCCEEEEECCCCCCCCCHHHHHHHH
TPRTKAVICVHLAGWPCDMDPIMELAARHGLKVIEDCAQAHGARYKGRSVGSIGHVGAWS
CCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
FCQDKIMTTGGEGGMVTLNDEALWREMWAYKDHGKSFEAVYEREHAPGFRWLHETFGTNW
HHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCE
RMLEMQAVIGRIQLRRMTEWTARRTEHAEAIHSACKPFSAVRVPVAPASSTHAQYKCYVY
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEE
VRPDHLAEGWTRDRIIQTIVDADVPCYQGSCSEVYLEKAFDDTGWRPAERLPIARAMGED
ECCHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHHCCCC
SLMFLVHPTLTKDEIAKTCRVLTDVLGRASR
CEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLNTSFSPWPSFTKEEADAVQQVLLSNKVNYWTGTECREFEKEFAAWTGTRHAIALSNGT
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
LALDLALKGLGIGPGDEVIVTPRTFIASASCVVNAGAIPVFADVDPESGNLSAETIARVL
EEEEEEEECCCCCCCCCEEECCHHHHHCCHHEEECCCCEEEEECCCCCCCCCHHHHHHHH
TPRTKAVICVHLAGWPCDMDPIMELAARHGLKVIEDCAQAHGARYKGRSVGSIGHVGAWS
CCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
FCQDKIMTTGGEGGMVTLNDEALWREMWAYKDHGKSFEAVYEREHAPGFRWLHETFGTNW
HHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCE
RMLEMQAVIGRIQLRRMTEWTARRTEHAEAIHSACKPFSAVRVPVAPASSTHAQYKCYVY
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEE
VRPDHLAEGWTRDRIIQTIVDADVPCYQGSCSEVYLEKAFDDTGWRPAERLPIARAMGED
ECCHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHHCCCC
SLMFLVHPTLTKDEIAKTCRVLTDVLGRASR
CEEEEEECCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]