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The map label for this gene is rfaB [C]

Identifier: 94311653

GI number: 94311653

Start: 2955739

End: 2956833

Strand: Direct

Name: rfaB [C]

Synonym: Rmet_2721

Alternate gene names: 94311653

Gene position: 2955739-2956833 (Clockwise)

Preceding gene: 94311652

Following gene: 94311654

Centisome position: 75.25

GC content: 61.19

Gene sequence:

>1095_bases
ATGAGTACGCCGCTGCCGACCGTCTGCTTCCTGACCGGGACGCTGAATGCTTTTGCTGGCGCGGAACGCATGACCGCGGT
CATCGCCAATGCGCTCGCAGAACGCGGCTATCGCGTGCTCGTGCTGAGCCTGTGGGACCGGACCAGCGTGTTCCCGCTGC
ATGAGGGCGTGGAGCACCACGCGTTGTTCGAGCAGCGACCGTCGTTCAAGCGTGCCTACGTTTCCACCGTGCTCGGAATT
CGACGCTTCGTACGGGAACAAGGTATCGACGTGCTGATCGAGGTCGACACCATGCTCACCCTATTCACGCTGCCGGCGAC
GTCAGGCATGAAGGTGCGAAGGATTGCATGGGAACACTGTCACTTTGATGAGGATCTGGGGAGAAAGGCGCGAAGGGTGG
CGCGGTGGTTGGCGGCTAAGACGAGCAGCGCCGTTGTGGTGTTGACGGAGCGGGACAGGCAGCGATGGCTAAATGCTCTC
GGTCAGCACTGTCGGATTGCAACCATTGGCAATCCGTTGCCTTTTGCATTTCCCGCGGAGCCCGCTCAACGCGGAAGCCG
GATTGTGCTGGCGGTAGGCCGGCTCGTGCGGGCGAAAGGCTTCGATGTTCTACTCGATGCCTGGGCCCGCGTGGCACCGG
CGCACCCGGATTGGCGACTGGTCATCGTCGGGGAAGGCGAAGAACGGGACGCACTGGAGGCGCAGATAAGAAGCCTTGCG
CTCGGCCATTGCGTCGACTTGCCCGGCGCCAGCTCGGAGATCGCCAGCTACTATGGCGAAGCCTCGATCTTCTGTCTCAG
TTCGCGCTATGAAGGATTCGGCCTGGTGCTCATGGAAGCGATGGCATTTGGATTGCCAGTGGTGTCGACGAATTGCGAAG
CCGGGCCCAAGGCGTTGATTCGGGACGGAGTGAATGGACTTCAGGTACCGGCTGAAGACGCGCTAGCGCTCGGTGCGGCA
TTATCGCGACTGATGCAGGAGAAGCATCTGTGCGAGGCGCTTTCGTCGCGGGCTCGGGATGATGCACGCCGCTACGAAAT
CGACGCCATTTGCCCGCTGTGGCAAAACCTGCTGGGTGATATACAGACTGTGTAA

Upstream 100 bases:

>100_bases
GGGGAGCGATCGCGGGCTATGCATTGGGCAACGGCGTGGCCGTGCTGGTCGGCCTGACCCTGTGGTGGCGGCACCGACCG
GCGCCCGAGGTGGCATCCAT

Downstream 100 bases:

>100_bases
CTATTGGTAGCATTTCAAAACATGACCGCCGAGGGGTTGGCGGCAGTAGTCGCGCTAGAATGGTGAAACTCTAAGAGTCC
CCCACTGCACGCCACAAATG

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSTPLPTVCFLTGTLNAFAGAERMTAVIANALAERGYRVLVLSLWDRTSVFPLHEGVEHHALFEQRPSFKRAYVSTVLGI
RRFVREQGIDVLIEVDTMLTLFTLPATSGMKVRRIAWEHCHFDEDLGRKARRVARWLAAKTSSAVVVLTERDRQRWLNAL
GQHCRIATIGNPLPFAFPAEPAQRGSRIVLAVGRLVRAKGFDVLLDAWARVAPAHPDWRLVIVGEGEERDALEAQIRSLA
LGHCVDLPGASSEIASYYGEASIFCLSSRYEGFGLVLMEAMAFGLPVVSTNCEAGPKALIRDGVNGLQVPAEDALALGAA
LSRLMQEKHLCEALSSRARDDARRYEIDAICPLWQNLLGDIQTV

Sequences:

>Translated_364_residues
MSTPLPTVCFLTGTLNAFAGAERMTAVIANALAERGYRVLVLSLWDRTSVFPLHEGVEHHALFEQRPSFKRAYVSTVLGI
RRFVREQGIDVLIEVDTMLTLFTLPATSGMKVRRIAWEHCHFDEDLGRKARRVARWLAAKTSSAVVVLTERDRQRWLNAL
GQHCRIATIGNPLPFAFPAEPAQRGSRIVLAVGRLVRAKGFDVLLDAWARVAPAHPDWRLVIVGEGEERDALEAQIRSLA
LGHCVDLPGASSEIASYYGEASIFCLSSRYEGFGLVLMEAMAFGLPVVSTNCEAGPKALIRDGVNGLQVPAEDALALGAA
LSRLMQEKHLCEALSSRARDDARRYEIDAICPLWQNLLGDIQTV
>Mature_363_residues
STPLPTVCFLTGTLNAFAGAERMTAVIANALAERGYRVLVLSLWDRTSVFPLHEGVEHHALFEQRPSFKRAYVSTVLGIR
RFVREQGIDVLIEVDTMLTLFTLPATSGMKVRRIAWEHCHFDEDLGRKARRVARWLAAKTSSAVVVLTERDRQRWLNALG
QHCRIATIGNPLPFAFPAEPAQRGSRIVLAVGRLVRAKGFDVLLDAWARVAPAHPDWRLVIVGEGEERDALEAQIRSLAL
GHCVDLPGASSEIASYYGEASIFCLSSRYEGFGLVLMEAMAFGLPVVSTNCEAGPKALIRDGVNGLQVPAEDALALGAAL
SRLMQEKHLCEALSSRARDDARRYEIDAICPLWQNLLGDIQTV

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=262, Percent_Identity=24.0458015267176, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788357, Length=151, Percent_Identity=31.7880794701987, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 40112; Mature: 39981

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPLPTVCFLTGTLNAFAGAERMTAVIANALAERGYRVLVLSLWDRTSVFPLHEGVEHH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHCCHHH
ALFEQRPSFKRAYVSTVLGIRRFVREQGIDVLIEVDTMLTLFTLPATSGMKVRRIAWEHC
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHC
HFDEDLGRKARRVARWLAAKTSSAVVVLTERDRQRWLNALGQHCRIATIGNPLPFAFPAE
CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCEEEEECCCCCCCCCCCC
PAQRGSRIVLAVGRLVRAKGFDVLLDAWARVAPAHPDWRLVIVGEGEERDALEAQIRSLA
HHHCCCEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHH
LGHCVDLPGASSEIASYYGEASIFCLSSRYEGFGLVLMEAMAFGLPVVSTNCEAGPKALI
HHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHH
RDGVNGLQVPAEDALALGAALSRLMQEKHLCEALSSRARDDARRYEIDAICPLWQNLLGD
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
IQTV
HCCC
>Mature Secondary Structure 
STPLPTVCFLTGTLNAFAGAERMTAVIANALAERGYRVLVLSLWDRTSVFPLHEGVEHH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHCCHHH
ALFEQRPSFKRAYVSTVLGIRRFVREQGIDVLIEVDTMLTLFTLPATSGMKVRRIAWEHC
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHC
HFDEDLGRKARRVARWLAAKTSSAVVVLTERDRQRWLNALGQHCRIATIGNPLPFAFPAE
CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCEEEEECCCCCCCCCCCC
PAQRGSRIVLAVGRLVRAKGFDVLLDAWARVAPAHPDWRLVIVGEGEERDALEAQIRSLA
HHHCCCEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHH
LGHCVDLPGASSEIASYYGEASIFCLSSRYEGFGLVLMEAMAFGLPVVSTNCEAGPKALI
HHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHH
RDGVNGLQVPAEDALALGAALSRLMQEKHLCEALSSRARDDARRYEIDAICPLWQNLLGD
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
IQTV
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]