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The map label for this gene is rfaL [C]

Identifier: 94311644

GI number: 94311644

Start: 2944575

End: 2945816

Strand: Reverse

Name: rfaL [C]

Synonym: Rmet_2712

Alternate gene names: 94311644

Gene position: 2945816-2944575 (Counterclockwise)

Preceding gene: 94311645

Following gene: 94311639

Centisome position: 74.99

GC content: 61.76

Gene sequence:

>1242_bases
ATGACCGATAGCAACAAGCTCCTGTCGAGGATGGCTACCGTCCTCGTCTTCGCCTTTCCCGTGTTGATCCTGTGCGTGCC
GCGAGGCGCGGGCGTGTTCCTGGCGGGGGTCGGCGTACTGGCACTGCTCGGCTGGCGCGGCATGGGGCGAGCTTGGCGCG
AGTATTCCAAGGTCATGACACCGCTGGCCATTGCCGTGCTGGCCTTCATGCTTGTCTACGTCGGCTCGAAGCTTTACTTC
CACACACCGTGGAACGTTATCGACAATCCTTCGCGAACGCTGCTGGCCATTCTGACGTGCTGGGTGATCGTGCGCGCGGC
GCCCAATCCCGCATGGCTCTGGCGAGGGATCACAGTGGGGCTGTTTCTGGCGCTGTTGATCGTTGGTTATCAGAAGTTTG
CCTTGAACATTGATCGGCCTTCGGCATGGATCCAGGCCATCGCCTTCGCGAACATGATCGCGGCACTCGCCTTGGTGGGT
TTCGCGCGCCCGGGCGATAGCCGTGGTACGCATATGGAAGCCTGGGTCAACCTTCTGCTCGGTACCATGATCCTCATGCT
GAATGGCACGCGAGGCGCTGTGGTGGCAATGCTCGTGACATCGGTGCCGATGCTGATGATCCGCTACCGGCGTTTCAGCG
TGCGGATGCTCATCGTGGCCGTTTGCGCGGTTGCAACGCTTGCCATTGGCGCGTACATGGTGCCGGATAGCCCAGTCTCC
AAACGCGTAGATGACGCCGTGTCGGAGATCCAGATGTATCGGCAAGGTAACATCGAAACGTCAGTTGGCGTGCGCCTGAA
GATCTGGCATATCGGCCTGCAGTACTTCAGCGAGCATCCCTGGACCGGAGTCGGTGTGGGGCAGTTCGCCCGGATTCTCC
ATGCCTCTGAGTTCTGCCACGAAACGAAATCGTTGGCATGCGTGCTCGAACATGCGCACAACGATATCGTGGAGGCGGCT
TCCACCACCGGTATCCCCGGGTTGATGGTCATGCTTGGCTTGTTCCTGGTGCCGGCAGTGCTGTTTGCCCGAGCCTTGCG
GGCGGCCCGCTCCCTGGGCAATCCGCAAGGCGTGAGTCTGGGCGGAGCTGGATTGGGCGTGGTGATGGCGTCCCTGATCA
GCGGCCTCACCCAGGTAACAATGGCCCACCAGGCCAACGTCGTTTTCTACGCGGGGCTCATCGGCCTGCTGTTGGGGATG
GCCGGGCGCGAGGCGCATTCGGCGCGGACCGACGCCGTCTGA

Upstream 100 bases:

>100_bases
GGCGCCTGCTGAGGGGCGGGGCGCCTGATCAGATAGAATCCGGCCTGATTTCAGAAGCGCCACGGCACAGTGGCGATACC
GGCGCATCAAGTATCCCACT

Downstream 100 bases:

>100_bases
CCTTGCCGGCGGTCAGGACCGTGGCGTAACACCCTGAGCCATGCTTTCACGTCGGCCGCGTTCACCGCGTGCCGGCTTGT
GCGCGGGCATGGCACCCACT

Product: putative cell surface polysaccharide polymerase/ligase

Products: NA

Alternate protein names: Lipopolysaccharide O-Antigen Ligase Transmembrane Protein; O-Antigen Ligase; Cell Surface Polysaccharide Polymerase/Ligase; O-Antigen Polymerase Protein

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MTDSNKLLSRMATVLVFAFPVLILCVPRGAGVFLAGVGVLALLGWRGMGRAWREYSKVMTPLAIAVLAFMLVYVGSKLYF
HTPWNVIDNPSRTLLAILTCWVIVRAAPNPAWLWRGITVGLFLALLIVGYQKFALNIDRPSAWIQAIAFANMIAALALVG
FARPGDSRGTHMEAWVNLLLGTMILMLNGTRGAVVAMLVTSVPMLMIRYRRFSVRMLIVAVCAVATLAIGAYMVPDSPVS
KRVDDAVSEIQMYRQGNIETSVGVRLKIWHIGLQYFSEHPWTGVGVGQFARILHASEFCHETKSLACVLEHAHNDIVEAA
STTGIPGLMVMLGLFLVPAVLFARALRAARSLGNPQGVSLGGAGLGVVMASLISGLTQVTMAHQANVVFYAGLIGLLLGM
AGREAHSARTDAV

Sequences:

>Translated_413_residues
MTDSNKLLSRMATVLVFAFPVLILCVPRGAGVFLAGVGVLALLGWRGMGRAWREYSKVMTPLAIAVLAFMLVYVGSKLYF
HTPWNVIDNPSRTLLAILTCWVIVRAAPNPAWLWRGITVGLFLALLIVGYQKFALNIDRPSAWIQAIAFANMIAALALVG
FARPGDSRGTHMEAWVNLLLGTMILMLNGTRGAVVAMLVTSVPMLMIRYRRFSVRMLIVAVCAVATLAIGAYMVPDSPVS
KRVDDAVSEIQMYRQGNIETSVGVRLKIWHIGLQYFSEHPWTGVGVGQFARILHASEFCHETKSLACVLEHAHNDIVEAA
STTGIPGLMVMLGLFLVPAVLFARALRAARSLGNPQGVSLGGAGLGVVMASLISGLTQVTMAHQANVVFYAGLIGLLLGM
AGREAHSARTDAV
>Mature_412_residues
TDSNKLLSRMATVLVFAFPVLILCVPRGAGVFLAGVGVLALLGWRGMGRAWREYSKVMTPLAIAVLAFMLVYVGSKLYFH
TPWNVIDNPSRTLLAILTCWVIVRAAPNPAWLWRGITVGLFLALLIVGYQKFALNIDRPSAWIQAIAFANMIAALALVGF
ARPGDSRGTHMEAWVNLLLGTMILMLNGTRGAVVAMLVTSVPMLMIRYRRFSVRMLIVAVCAVATLAIGAYMVPDSPVSK
RVDDAVSEIQMYRQGNIETSVGVRLKIWHIGLQYFSEHPWTGVGVGQFARILHASEFCHETKSLACVLEHAHNDIVEAAS
TTGIPGLMVMLGLFLVPAVLFARALRAARSLGNPQGVSLGGAGLGVVMASLISGLTQVTMAHQANVVFYAGLIGLLLGMA
GREAHSARTDAV

Specific function: Adds The O-Antigen On The Glucose Group Of Lps. [C]

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44496; Mature: 44364

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSNKLLSRMATVLVFAFPVLILCVPRGAGVFLAGVGVLALLGWRGMGRAWREYSKVMT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
PLAIAVLAFMLVYVGSKLYFHTPWNVIDNPSRTLLAILTCWVIVRAAPNPAWLWRGITVG
HHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LFLALLIVGYQKFALNIDRPSAWIQAIAFANMIAALALVGFARPGDSRGTHMEAWVNLLL
HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
GTMILMLNGTRGAVVAMLVTSVPMLMIRYRRFSVRMLIVAVCAVATLAIGAYMVPDSPVS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHH
KRVDDAVSEIQMYRQGNIETSVGVRLKIWHIGLQYFSEHPWTGVGVGQFARILHASEFCH
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ETKSLACVLEHAHNDIVEAASTTGIPGLMVMLGLFLVPAVLFARALRAARSLGNPQGVSL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GGAGLGVVMASLISGLTQVTMAHQANVVFYAGLIGLLLGMAGREAHSARTDAV
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure 
TDSNKLLSRMATVLVFAFPVLILCVPRGAGVFLAGVGVLALLGWRGMGRAWREYSKVMT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
PLAIAVLAFMLVYVGSKLYFHTPWNVIDNPSRTLLAILTCWVIVRAAPNPAWLWRGITVG
HHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LFLALLIVGYQKFALNIDRPSAWIQAIAFANMIAALALVGFARPGDSRGTHMEAWVNLLL
HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
GTMILMLNGTRGAVVAMLVTSVPMLMIRYRRFSVRMLIVAVCAVATLAIGAYMVPDSPVS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHH
KRVDDAVSEIQMYRQGNIETSVGVRLKIWHIGLQYFSEHPWTGVGVGQFARILHASEFCH
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ETKSLACVLEHAHNDIVEAASTTGIPGLMVMLGLFLVPAVLFARALRAARSLGNPQGVSL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GGAGLGVVMASLISGLTQVTMAHQANVVFYAGLIGLLLGMAGREAHSARTDAV
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA