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The map label for this gene is tolR [H]

Identifier: 94311609

GI number: 94311609

Start: 2911164

End: 2911601

Strand: Reverse

Name: tolR [H]

Synonym: Rmet_2677

Alternate gene names: 94311609

Gene position: 2911601-2911164 (Counterclockwise)

Preceding gene: 94311610

Following gene: 94311608

Centisome position: 74.12

GC content: 63.01

Gene sequence:

>438_bases
ATGGCAGCCATTCAGCGCCGCGGCGGATCACGCCGTCGGGCCAGTGCGGAAATCAACGTCGTGCCGTATATCGACGTGAT
GCTCGTGCTGCTCGTTATCTTCATGGTGGCAGCACCAATCGTGAACCCGGCCGTGGTGGACCTGCCGTCAGTGGCCAATG
CCACACCGCAGCAACAGACGCCGCCGATCATCGTCACCGTGCACGAGGACGGCGAGCTGACCGCGCGTGGCAAGGACAAC
GCCGGCAACGCGTTCGAGCGCAAGCTCGACAAGCGCGGCCTGATCGATTTCGTGCGCCAGCGTCAGAATGAAAATCCGGA
CCAGCCGGTGGTGATCGCCGCCGACCGCTCCGTCAAGTACGAAGCCGTGCTCGACGTGATGTCCGTGTTGAAGGCCGATG
GCGTCAAGCGCGTCGGCCTGATGGTGAAGTCCAAGTAA

Upstream 100 bases:

>100_bases
AATCGACCGTCTGGCCATCCGGTTCGAAAGCTTCATGGAAGAATTCCTGAACATCCTTCAGCGCCAGACGCGTTAAACCG
AGAGCGGGGGAGCACCAGTC

Downstream 100 bases:

>100_bases
GCGCCCCAACGTCGCAACTCAAAGTGGCCAGCCTTTCGTCCCGTCATCCGCATCAACGGCCCGCGCGCGCGGTGGAAGCC
GCCGCCTATCCGTACCAGCC

Product: membrane spanning protein in TolA-TolQ-TolR complex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MAAIQRRGGSRRRASAEINVVPYIDVMLVLLVIFMVAAPIVNPAVVDLPSVANATPQQQTPPIIVTVHEDGELTARGKDN
AGNAFERKLDKRGLIDFVRQRQNENPDQPVVIAADRSVKYEAVLDVMSVLKADGVKRVGLMVKSK

Sequences:

>Translated_145_residues
MAAIQRRGGSRRRASAEINVVPYIDVMLVLLVIFMVAAPIVNPAVVDLPSVANATPQQQTPPIIVTVHEDGELTARGKDN
AGNAFERKLDKRGLIDFVRQRQNENPDQPVVIAADRSVKYEAVLDVMSVLKADGVKRVGLMVKSK
>Mature_144_residues
AAIQRRGGSRRRASAEINVVPYIDVMLVLLVIFMVAAPIVNPAVVDLPSVANATPQQQTPPIIVTVHEDGELTARGKDNA
GNAFERKLDKRGLIDFVRQRQNENPDQPVVIAADRSVKYEAVLDVMSVLKADGVKRVGLMVKSK

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=126, Percent_Identity=34.9206349206349, Blast_Score=63, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15826; Mature: 15694

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIQRRGGSRRRASAEINVVPYIDVMLVLLVIFMVAAPIVNPAVVDLPSVANATPQQQT
CCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCC
PPIIVTVHEDGELTARGKDNAGNAFERKLDKRGLIDFVRQRQNENPDQPVVIAADRSVKY
CCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHH
EAVLDVMSVLKADGVKRVGLMVKSK
HHHHHHHHHHHHCCCCEEEEEEECC
>Mature Secondary Structure 
AAIQRRGGSRRRASAEINVVPYIDVMLVLLVIFMVAAPIVNPAVVDLPSVANATPQQQT
CCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCC
PPIIVTVHEDGELTARGKDNAGNAFERKLDKRGLIDFVRQRQNENPDQPVVIAADRSVKY
CCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHH
EAVLDVMSVLKADGVKRVGLMVKSK
HHHHHHHHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]