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The map label for this gene is ybgF [C]

Identifier: 94311605

GI number: 94311605

Start: 2907198

End: 2907956

Strand: Reverse

Name: ybgF [C]

Synonym: Rmet_2673

Alternate gene names: 94311605

Gene position: 2907956-2907198 (Counterclockwise)

Preceding gene: 94311606

Following gene: 94311604

Centisome position: 74.03

GC content: 62.98

Gene sequence:

>759_bases
ATGAATGCTCGCGTTTCCACGCTGCTATGGCTTGCCGCTGTATCCGGCGGTGGCCTGCTGGCAGCCATTCCCGCGCACGC
CGGCGTCTTTGACGACGACGAGGCGCGCCGTGCGGTGATCCAGATCCGGGACCAGTTCAACGGTTTCCAGGCCACGGCAT
CCCAGCGCATCGACCAGAACAGCCGGACCCTGCTCGACGCGCAGAACCAGCTCGAAGGTCTGCGCCAAGAGGTCGCCCGA
CTGCGCGGTCAGAATGAAGTGCTGCAAAACACGGTGGATACGCTGCAGAAGCAGCAGAAGGATTACTACGCTGACCTGGA
TGCGCGCCTGAAGAAATTCGAGCCGCAGCAGGTGACCGTGGAAGGGCGCGAGGGCATCGCCCAGCCGACCGAGAAGCCGG
AGTACGACGCTGCGCTGAAGCAGTTCCAGTCGGGCGACTTCAAGGGCGCGGGCAATGCCTTCTCGGCGTTTGCGAAGAAG
TATCCGCAAAGCCCGTACTTGCCGCTGGCGCAGTTCTGGCTCGGCAATTCGCTCTACGCGCAGCGCGACTACAAGGGGTC
GACCTACGTGCTGGATACCATGGTGAAGAACTTCCCGACGCACCCGAAGGCGCCGGACGCCATGATCGCCATCGCCAACA
ACCAGTTCGAGTCTGGCCAGAAGGCCGCGGCCAAGAAGACACTGGAAGCCGTGGTGGCGAAATATCCGGGGACTGAAGGC
GCCCAGGCCGCGAGCAACCGGCTGAAGACGCTGAAGTAA

Upstream 100 bases:

>100_bases
GCCTGGGCAAGGAAAAGCCGAAGGCAACCGGTCACGATGATGCCTCGTGGGCCGAGAACCGTCGCGCCGATATCGTTTAC
TGATCCACGGATAATTCTTC

Downstream 100 bases:

>100_bases
CCGATACCGGTATGTAGTCCAGGAAAGGGTCCGCGCGAGCGGGCCTTTTTCTTTGGGCTGCCGCATATCAATCGCCGTGG
GATTCAGGCCATCAGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNARVSTLLWLAAVSGGGLLAAIPAHAGVFDDDEARRAVIQIRDQFNGFQATASQRIDQNSRTLLDAQNQLEGLRQEVAR
LRGQNEVLQNTVDTLQKQQKDYYADLDARLKKFEPQQVTVEGREGIAQPTEKPEYDAALKQFQSGDFKGAGNAFSAFAKK
YPQSPYLPLAQFWLGNSLYAQRDYKGSTYVLDTMVKNFPTHPKAPDAMIAIANNQFESGQKAAAKKTLEAVVAKYPGTEG
AQAASNRLKTLK

Sequences:

>Translated_252_residues
MNARVSTLLWLAAVSGGGLLAAIPAHAGVFDDDEARRAVIQIRDQFNGFQATASQRIDQNSRTLLDAQNQLEGLRQEVAR
LRGQNEVLQNTVDTLQKQQKDYYADLDARLKKFEPQQVTVEGREGIAQPTEKPEYDAALKQFQSGDFKGAGNAFSAFAKK
YPQSPYLPLAQFWLGNSLYAQRDYKGSTYVLDTMVKNFPTHPKAPDAMIAIANNQFESGQKAAAKKTLEAVVAKYPGTEG
AQAASNRLKTLK
>Mature_252_residues
MNARVSTLLWLAAVSGGGLLAAIPAHAGVFDDDEARRAVIQIRDQFNGFQATASQRIDQNSRTLLDAQNQLEGLRQEVAR
LRGQNEVLQNTVDTLQKQQKDYYADLDARLKKFEPQQVTVEGREGIAQPTEKPEYDAALKQFQSGDFKGAGNAFSAFAKK
YPQSPYLPLAQFWLGNSLYAQRDYKGSTYVLDTMVKNFPTHPKAPDAMIAIANNQFESGQKAAAKKTLEAVVAKYPGTEG
AQAASNRLKTLK

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybgF [H]

Homologues:

Organism=Escherichia coli, GI1786963, Length=99, Percent_Identity=41.4141414141414, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27756; Mature: 27756

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARVSTLLWLAAVSGGGLLAAIPAHAGVFDDDEARRAVIQIRDQFNGFQATASQRIDQN
CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCC
SRTLLDAQNQLEGLRQEVARLRGQNEVLQNTVDTLQKQQKDYYADLDARLKKFEPQQVTV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
EGREGIAQPTEKPEYDAALKQFQSGDFKGAGNAFSAFAKKYPQSPYLPLAQFWLGNSLYA
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCEE
QRDYKGSTYVLDTMVKNFPTHPKAPDAMIAIANNQFESGQKAAAKKTLEAVVAKYPGTEG
CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC
AQAASNRLKTLK
HHHHHHHHHCCC
>Mature Secondary Structure
MNARVSTLLWLAAVSGGGLLAAIPAHAGVFDDDEARRAVIQIRDQFNGFQATASQRIDQN
CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCC
SRTLLDAQNQLEGLRQEVARLRGQNEVLQNTVDTLQKQQKDYYADLDARLKKFEPQQVTV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
EGREGIAQPTEKPEYDAALKQFQSGDFKGAGNAFSAFAKKYPQSPYLPLAQFWLGNSLYA
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCEE
QRDYKGSTYVLDTMVKNFPTHPKAPDAMIAIANNQFESGQKAAAKKTLEAVVAKYPGTEG
CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC
AQAASNRLKTLK
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]