| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is sseA [H]
Identifier: 94311556
GI number: 94311556
Start: 2851183
End: 2852040
Strand: Direct
Name: sseA [H]
Synonym: Rmet_2620
Alternate gene names: 94311556
Gene position: 2851183-2852040 (Clockwise)
Preceding gene: 94311555
Following gene: 94311561
Centisome position: 72.58
GC content: 67.37
Gene sequence:
>858_bases ATGCCGACTCCGCTGATCACCGCCACCGAACTCGACCAACTGCGCGCCGCCGGCAAGCCGCGCGTAGTCGTCTTCGACTG CTCGTTCGACCTGACCAACCCCGCCGCCGGCCGCGATAGCTATCAACAAGGCCATATCCCCGGCGCGTATTACCTCCACC TCGACAACGAACTCTCCGGACCGAAGACGGGCCTCAGCGGTCGCCACCCGCTGCCTGATGCCGAACTGTTCGCAGCGCGC CTGCGCGTGCTGGGCGTCGATGACGATACGCTGGTCGTGGCCTATGACGGACAAGGCAGCATGTATGCCGCACGGCTCTG GTGGATGCTGCGCTGGATCGGCCATGCCGCGGCGCTCGTGCTCGATGGCGGACGCAATGCGTGGGTGGCGGCCGGGTTGC CGCTGGAGCATGGCGCAACGGCCGAGCCGGAGATCGGCGGTAACCTGATGCGCCGTGCGTCGCTGGTGAAGACCGTGGAT GCCGACGCGCTGGTGGCGAACCTGAGCCAGCCTTCGCTGCTGGTCGTCGATGCCCGCGCCGCGGACCGCTTCCGCGGCGA AAACGAAACGCTCGACCCGGTGGGCGGCCATATTCCCGGCGCCGCCAATCGTTTCTTCAAGGACAACCTGACGGCTGACG GCTACTTCAAGCCGGCCGATCAATTGCGCGCCGACTTCGGACAGGTGTTCACGGGCAAGGCCCCGGCGCAGACGGTGATG CAGTGCGGCTCGGGCGTCACGGCCTGCCACAATCTTCTGGCATTGGAAGTCGCCGGCCTGACCGGCGCGGCGCTCTATCC GGGCTCATGGAGCGAGTGGTGCGCTGACCCGAAGCGGCCAGTCGCCACCGGCAGCTAA
Upstream 100 bases:
>100_bases GCCACCCCGGTCAAGTCACTCGAGGCCGAGGTGCATCCGGAGGTGTAGGCCGGTGTAGCATTGGCGGCATGTTCCGACAC GCAACGCAGACAGGACTTTC
Downstream 100 bases:
>100_bases GCCGGAATTCCCGCCAGCGACATCAGTTCGATGTCACCCCGGCGGCGGTGCGCGAGTGGCGATGCCCGTGTTGCTCGTGC ACGCCATTCGTGATGAAAAC
Product: Rhodanese-related sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MPTPLITATELDQLRAAGKPRVVVFDCSFDLTNPAAGRDSYQQGHIPGAYYLHLDNELSGPKTGLSGRHPLPDAELFAAR LRVLGVDDDTLVVAYDGQGSMYAARLWWMLRWIGHAAALVLDGGRNAWVAAGLPLEHGATAEPEIGGNLMRRASLVKTVD ADALVANLSQPSLLVVDARAADRFRGENETLDPVGGHIPGAANRFFKDNLTADGYFKPADQLRADFGQVFTGKAPAQTVM QCGSGVTACHNLLALEVAGLTGAALYPGSWSEWCADPKRPVATGS
Sequences:
>Translated_285_residues MPTPLITATELDQLRAAGKPRVVVFDCSFDLTNPAAGRDSYQQGHIPGAYYLHLDNELSGPKTGLSGRHPLPDAELFAAR LRVLGVDDDTLVVAYDGQGSMYAARLWWMLRWIGHAAALVLDGGRNAWVAAGLPLEHGATAEPEIGGNLMRRASLVKTVD ADALVANLSQPSLLVVDARAADRFRGENETLDPVGGHIPGAANRFFKDNLTADGYFKPADQLRADFGQVFTGKAPAQTVM QCGSGVTACHNLLALEVAGLTGAALYPGSWSEWCADPKRPVATGS >Mature_284_residues PTPLITATELDQLRAAGKPRVVVFDCSFDLTNPAAGRDSYQQGHIPGAYYLHLDNELSGPKTGLSGRHPLPDAELFAARL RVLGVDDDTLVVAYDGQGSMYAARLWWMLRWIGHAAALVLDGGRNAWVAAGLPLEHGATAEPEIGGNLMRRASLVKTVDA DALVANLSQPSLLVVDARAADRFRGENETLDPVGGHIPGAANRFFKDNLTADGYFKPADQLRADFGQVFTGKAPAQTVMQ CGSGVTACHNLLALEVAGLTGAALYPGSWSEWCADPKRPVATGS
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI17402865, Length=293, Percent_Identity=35.1535836177474, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI194473668, Length=273, Percent_Identity=37.3626373626374, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI61835204, Length=273, Percent_Identity=37.7289377289377, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI194473681, Length=273, Percent_Identity=37.7289377289377, Blast_Score=132, Evalue=3e-31, Organism=Escherichia coli, GI87082121, Length=246, Percent_Identity=38.2113821138211, Blast_Score=121, Evalue=6e-29, Organism=Escherichia coli, GI87081967, Length=259, Percent_Identity=29.3436293436293, Blast_Score=85, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71997283, Length=273, Percent_Identity=29.3040293040293, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17561888, Length=252, Percent_Identity=29.3650793650794, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324825, Length=260, Percent_Identity=24.6153846153846, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 30289; Mature: 30158
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00380 RHODANESE_1 ; PS00683 RHODANESE_2 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPLITATELDQLRAAGKPRVVVFDCSFDLTNPAAGRDSYQQGHIPGAYYLHLDNELSG CCCCCEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC PKTGLSGRHPLPDAELFAARLRVLGVDDDTLVVAYDGQGSMYAARLWWMLRWIGHAAALV CCCCCCCCCCCCHHHHHHHHHHEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEE LDGGRNAWVAAGLPLEHGATAEPEIGGNLMRRASLVKTVDADALVANLSQPSLLVVDARA EECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCH ADRFRGENETLDPVGGHIPGAANRFFKDNLTADGYFKPADQLRADFGQVFTGKAPAQTVM HHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH QCGSGVTACHNLLALEVAGLTGAALYPGSWSEWCADPKRPVATGS HHCCCHHHHHHHHHEEECCCCCCEECCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure PTPLITATELDQLRAAGKPRVVVFDCSFDLTNPAAGRDSYQQGHIPGAYYLHLDNELSG CCCCEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC PKTGLSGRHPLPDAELFAARLRVLGVDDDTLVVAYDGQGSMYAARLWWMLRWIGHAAALV CCCCCCCCCCCCHHHHHHHHHHEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEE LDGGRNAWVAAGLPLEHGATAEPEIGGNLMRRASLVKTVDADALVANLSQPSLLVVDARA EECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCH ADRFRGENETLDPVGGHIPGAANRFFKDNLTADGYFKPADQLRADFGQVFTGKAPAQTVM HHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH QCGSGVTACHNLLALEVAGLTGAALYPGSWSEWCADPKRPVATGS HHCCCHHHHHHHHHEEECCCCCCEECCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]