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The map label for this gene is yeaW [H]

Identifier: 94311554

GI number: 94311554

Start: 2848907

End: 2850010

Strand: Direct

Name: yeaW [H]

Synonym: Rmet_2618

Alternate gene names: 94311554

Gene position: 2848907-2850010 (Clockwise)

Preceding gene: 335055616

Following gene: 94311555

Centisome position: 72.53

GC content: 61.68

Gene sequence:

>1104_bases
ATGTCCAATCTCAGCACCGCGCTCAAGCTGGCGCCGGCTGATTCGCAGTTGCCCGTAAATGTCTACTTTGACGAGGCACT
GCATCAACAAGAACTGGAACTGCTGTTCAAGAATGGCCCCGGCTACGTCGGCCACGAACTGATGGTGCCGGAGACCGGCG
ACTTTCAGACGCTGGCCGCCGAGGACGAAGGCCGTATGCTGGTGCGCAACCCTGACGGCATCGAGCTGCTGTCGAACGTG
TGCCGCCATCGCCAAGCCATCATGCTCAACGGCCGCGGCAATGCCAGGAACATCGTCTGCCCGCTGCATCGCTGGACATA
CGACCTCAAGGGTGGCCTGCTCGGCGCGCCGCACTTCGAGAAGCAGCCCTGCACGCACCTGAACCGCTCGCCGCTGCAGA
ACTGGAACGGCCTGCTGTTTGAGGGCAAGCGCGACGTGCGCGCCGACCTGGCAAAGCTCGGCGTGGCGCAGGACCTGAAC
TTCGACGGTTACAAGCTCGACCACGTGGAAGTCCACGACTGTGATTACAACTGGAAGACCTTCATCGAGGTCTATCTGGA
GGACTATCACGTCGTGCCGTTCCACCCGGGCTTGGGCAGCTTTGTCTCCTGCGACGACCTCAAGTGGGAATTCGGCGACT
GGCATAGCGTGCAGACCGTGGGCCTGCATGCTGGCCTGAAGCGCCCGGGCAGCCCTACGTACGAGAAGTGGCACGAGGCT
GTGTTGCGCTTCAACAACGGGCAACTGCCGAAGCACGGCGCGATCTGGCTGACCTACTTCCCCAACATCATGGTGGAGTG
GTACCCGAATGTGCTGTGCATTTCGACGCTGCACCCGTTGGGCCCGCGCAAGACGCGCAATATCGTCGAGTTCTACTACC
CCGAGGAAATCGCGCTGTTCGAACGCGAGTTCGTCGAGGCCGAGCGCGCTGCCTATATGGAAACGTGCATCGAGGACGAC
GAGATCGCCGAGCGAATGGACGCCGGCCGCCTGGCGCTGATGAAGCGCGGTATCAGCGAGACCGGCCCCTACCAGTCTCC
GATGGAAGACGGCATGCAGCACTTCCACGAGTGGTACCGCCGCGTGATGGACTACAGCAGATAA

Upstream 100 bases:

>100_bases
CCTGGCCGGATCCGGCTCGTCTGACACGGTTTCCCAAATCGATTCATATTTCGATGGTTGGGTTGTTCACTGCTTTCGCC
TGTTATAGGGAGTGGGGATA

Downstream 100 bases:

>100_bases
CAGGCGTGCGCTGATCGCCCGTTATCGGTGGATGCCAGCAAACGGACCGCGAGAGCGGTCCGTTTGCATTGGTGCGGCCG
CCGGAGCACTGCTAGAATCC

Product: 2Fe-2S (Rieske)cluster-containing dioxygenase large terminal subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSNLSTALKLAPADSQLPVNVYFDEALHQQELELLFKNGPGYVGHELMVPETGDFQTLAAEDEGRMLVRNPDGIELLSNV
CRHRQAIMLNGRGNARNIVCPLHRWTYDLKGGLLGAPHFEKQPCTHLNRSPLQNWNGLLFEGKRDVRADLAKLGVAQDLN
FDGYKLDHVEVHDCDYNWKTFIEVYLEDYHVVPFHPGLGSFVSCDDLKWEFGDWHSVQTVGLHAGLKRPGSPTYEKWHEA
VLRFNNGQLPKHGAIWLTYFPNIMVEWYPNVLCISTLHPLGPRKTRNIVEFYYPEEIALFEREFVEAERAAYMETCIEDD
EIAERMDAGRLALMKRGISETGPYQSPMEDGMQHFHEWYRRVMDYSR

Sequences:

>Translated_367_residues
MSNLSTALKLAPADSQLPVNVYFDEALHQQELELLFKNGPGYVGHELMVPETGDFQTLAAEDEGRMLVRNPDGIELLSNV
CRHRQAIMLNGRGNARNIVCPLHRWTYDLKGGLLGAPHFEKQPCTHLNRSPLQNWNGLLFEGKRDVRADLAKLGVAQDLN
FDGYKLDHVEVHDCDYNWKTFIEVYLEDYHVVPFHPGLGSFVSCDDLKWEFGDWHSVQTVGLHAGLKRPGSPTYEKWHEA
VLRFNNGQLPKHGAIWLTYFPNIMVEWYPNVLCISTLHPLGPRKTRNIVEFYYPEEIALFEREFVEAERAAYMETCIEDD
EIAERMDAGRLALMKRGISETGPYQSPMEDGMQHFHEWYRRVMDYSR
>Mature_366_residues
SNLSTALKLAPADSQLPVNVYFDEALHQQELELLFKNGPGYVGHELMVPETGDFQTLAAEDEGRMLVRNPDGIELLSNVC
RHRQAIMLNGRGNARNIVCPLHRWTYDLKGGLLGAPHFEKQPCTHLNRSPLQNWNGLLFEGKRDVRADLAKLGVAQDLNF
DGYKLDHVEVHDCDYNWKTFIEVYLEDYHVVPFHPGLGSFVSCDDLKWEFGDWHSVQTVGLHAGLKRPGSPTYEKWHEAV
LRFNNGQLPKHGAIWLTYFPNIMVEWYPNVLCISTLHPLGPRKTRNIVEFYYPEEIALFEREFVEAERAAYMETCIEDDE
IAERMDAGRLALMKRGISETGPYQSPMEDGMQHFHEWYRRVMDYSR

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=396, Percent_Identity=25.2525252525253, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788888, Length=225, Percent_Identity=27.1111111111111, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 42324; Mature: 42193

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLSTALKLAPADSQLPVNVYFDEALHQQELELLFKNGPGYVGHELMVPETGDFQTLAA
CCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEE
EDEGRMLVRNPDGIELLSNVCRHRQAIMLNGRGNARNIVCPLHRWTYDLKGGLLGAPHFE
CCCCCEEEECCCHHHHHHHHHHCCEEEEEECCCCCCCEEECHHHCEEECCCCEECCCCCC
KQPCTHLNRSPLQNWNGLLFEGKRDVRADLAKLGVAQDLNFDGYKLDHVEVHDCDYNWKT
CCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCEEECEEEEECCCCCHHH
FIEVYLEDYHVVPFHPGLGSFVSCDDLKWEFGDWHSVQTVGLHAGLKRPGSPTYEKWHEA
HHHEEECCEEEEECCCCCCCCEECCCCCCCCCCCCCEEEEEHHHCCCCCCCCCHHHHHHH
VLRFNNGQLPKHGAIWLTYFPNIMVEWYPNVLCISTLHPLGPRKTRNIVEFYYPEEIALF
HHCCCCCCCCCCCCEEEEECCCHHEECCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHH
EREFVEAERAAYMETCIEDDEIAERMDAGRLALMKRGISETGPYQSPMEDGMQHFHEWYR
HHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
RVMDYSR
HHHCCCC
>Mature Secondary Structure 
SNLSTALKLAPADSQLPVNVYFDEALHQQELELLFKNGPGYVGHELMVPETGDFQTLAA
CCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEE
EDEGRMLVRNPDGIELLSNVCRHRQAIMLNGRGNARNIVCPLHRWTYDLKGGLLGAPHFE
CCCCCEEEECCCHHHHHHHHHHCCEEEEEECCCCCCCEEECHHHCEEECCCCEECCCCCC
KQPCTHLNRSPLQNWNGLLFEGKRDVRADLAKLGVAQDLNFDGYKLDHVEVHDCDYNWKT
CCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCEEECEEEEECCCCCHHH
FIEVYLEDYHVVPFHPGLGSFVSCDDLKWEFGDWHSVQTVGLHAGLKRPGSPTYEKWHEA
HHHEEECCEEEEECCCCCCCCEECCCCCCCCCCCCCEEEEEHHHCCCCCCCCCHHHHHHH
VLRFNNGQLPKHGAIWLTYFPNIMVEWYPNVLCISTLHPLGPRKTRNIVEFYYPEEIALF
HHCCCCCCCCCCCCEEEEECCCHHEECCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHH
EREFVEAERAAYMETCIEDDEIAERMDAGRLALMKRGISETGPYQSPMEDGMQHFHEWYR
HHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
RVMDYSR
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]