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The map label for this gene is ydiF [H]

Identifier: 94311521

GI number: 94311521

Start: 2810569

End: 2812212

Strand: Reverse

Name: ydiF [H]

Synonym: Rmet_2585

Alternate gene names: 94311521

Gene position: 2812212-2810569 (Counterclockwise)

Preceding gene: 94311523

Following gene: 94311520

Centisome position: 71.59

GC content: 67.27

Gene sequence:

>1644_bases
ATGAAGGTGATCACCACCGCGCAGGCGGCCGCGCTCGTGCAGAGCGGCTGGACCGTGGCTAGCGCCGGGTTTGTCGGGGC
GGGGCACGCCGAAGGGGTGACCGAGGCGCTCGAGCAGCGCTTCTTGCGCGAGGCCCTGCCACGAGACCTGACGCTGGTGT
ATTCGGCCGGGCAGGGCGACCGGGGCGCCCGTGGTGTGAACCATTTCGGTAACGTCGGCATGACCCGCGCGGTCGTCGGC
GGTCACTGGCGCTCCGCCACGCGGCTGGCCACGCTGGCGATGACCGAGCAGTGCGAAGGCTTCAACCTGCCACAGGGCGT
GCTCACGCACCTCTATCGGGCCATCGCAGGCGGCAAGCCCGGCGTACTGACCAAGATCGGTCTGCATACGTTCGTCGATC
CTCGTGTCGAGAAGGACGCGCGTTACCACGGTGGCGCGGTCAACCAGCGTGCCCGCGATGCCATTGCCGCCGGTACGGCG
AACTGGGTAGAGGCGGTCGACTTCCGTGGCGACGAATATCTGTTCTATCCGAGCTTCCGCATCGATTGCGCGCTGATCCG
CTGCACGGCGTCCGACACGCGCGGCAATCTCAGCACGCATCGCGAGGCCTTCCACCACGAACTGCTGGCGATGGCGCAAG
CCGCGCACAACTCGGGCGGCATCGTGATCGCCCAGGTGGAGTCGGTGGTCGACTACCACGAGACCCTGCAGGCCATCCAC
GTGCCGGGCATTCTGGTGGACTACGTGGTGGTCAGTGAACAGCCAGGGCATCACCTGATGACGTTTGCCGAGGCCTACAA
CGAAGCCTATGTCAGGCCGTGGCGCGGTGAAGCCGCCGAGGCCGCGGAGCGGGCGAAGGAAGCCGAGGTGTTGCCAGATG
CGTCGGCGCAACTCGATGCGCGCACGATTGTGCAGCGGCGCGCCGTCATGGAGCTTGCGGCACGCAAACCGCGCGTGGTG
AACCTGGGTGTCGGGATGCCCGCCGCGGTTGGCGCGCTGGCGCATCAGGCCGGCCTGGGCGGTTTCACGCTGACCGTGGA
AGCCGGTCCGATCGGCGGCACGCCGGCGGATGGACTGAGCTTCGGCGCGTCGGCCTATCCCGAAGCGGTGGTCGACCAGC
CCGCGCAGTTCGACTTCTACGAAGGCGGCGGCATCGACCTTGCGATTCTCGGTCTGGCCGAACTCGACGGGCACGGCAAC
GTCAACGTGAGCAAGTTCGGGGAAGGCGAGGGCGCGTTGATCGCTGGCGTTGGCGGCTTTATCAACATCACCCAGAGCGC
ACGCGCCGTGGTGTTCATGGGCACGCTGACAGCCGGCGGCCTCGAGGTACGGGTCGAGCAGGACCAGTTGCGGATCGCGC
GCGAGGGTCGTGTGAAGAAGATCGTGCCCGAGGTATCGCACCTGAGCTTCAACGGCCCGTATGTGGCGTCGCTCGGTGTG
CCTGTGCTCTACATCACCGAACGTGCCGTGTTCGAAATGCGCGCTGACGCGCAGGGCGATGCTCGCCTGACGCTGGTCGA
GATCGCCCCCGGCGTGGACCTGCAACGCGACGTGCTCGATCAATGCGCCACGCCGGTCGCCGTGGCCGATGACCTGCGCC
TGATGGACGCGCGGTTGTTCCGGCCCGGCGTCATGAAGCTCTGA

Upstream 100 bases:

>100_bases
GTTTTCCGAACAAATGTTCGCAAAACGTGGTTCGGCGAAAACCACGATGGCAGGACAGTCCGGAAACGCCAGAAAAAACC
AGAAGAACCAGGAGACAGCG

Downstream 100 bases:

>100_bases
AACGGATTCTCAAAAACGAAAAAGCAGGCCGGCGTGTCCTGTTCGCCGGCAGCAATTGGAGGAAGCAACGTGCAATACCG
TAGTCACCGTCATCAACGTA

Product: acetyl-CoA:acetoacetyl-CoA transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MKVITTAQAAALVQSGWTVASAGFVGAGHAEGVTEALEQRFLREALPRDLTLVYSAGQGDRGARGVNHFGNVGMTRAVVG
GHWRSATRLATLAMTEQCEGFNLPQGVLTHLYRAIAGGKPGVLTKIGLHTFVDPRVEKDARYHGGAVNQRARDAIAAGTA
NWVEAVDFRGDEYLFYPSFRIDCALIRCTASDTRGNLSTHREAFHHELLAMAQAAHNSGGIVIAQVESVVDYHETLQAIH
VPGILVDYVVVSEQPGHHLMTFAEAYNEAYVRPWRGEAAEAAERAKEAEVLPDASAQLDARTIVQRRAVMELAARKPRVV
NLGVGMPAAVGALAHQAGLGGFTLTVEAGPIGGTPADGLSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGHGN
VNVSKFGEGEGALIAGVGGFINITQSARAVVFMGTLTAGGLEVRVEQDQLRIAREGRVKKIVPEVSHLSFNGPYVASLGV
PVLYITERAVFEMRADAQGDARLTLVEIAPGVDLQRDVLDQCATPVAVADDLRLMDARLFRPGVMKL

Sequences:

>Translated_547_residues
MKVITTAQAAALVQSGWTVASAGFVGAGHAEGVTEALEQRFLREALPRDLTLVYSAGQGDRGARGVNHFGNVGMTRAVVG
GHWRSATRLATLAMTEQCEGFNLPQGVLTHLYRAIAGGKPGVLTKIGLHTFVDPRVEKDARYHGGAVNQRARDAIAAGTA
NWVEAVDFRGDEYLFYPSFRIDCALIRCTASDTRGNLSTHREAFHHELLAMAQAAHNSGGIVIAQVESVVDYHETLQAIH
VPGILVDYVVVSEQPGHHLMTFAEAYNEAYVRPWRGEAAEAAERAKEAEVLPDASAQLDARTIVQRRAVMELAARKPRVV
NLGVGMPAAVGALAHQAGLGGFTLTVEAGPIGGTPADGLSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGHGN
VNVSKFGEGEGALIAGVGGFINITQSARAVVFMGTLTAGGLEVRVEQDQLRIAREGRVKKIVPEVSHLSFNGPYVASLGV
PVLYITERAVFEMRADAQGDARLTLVEIAPGVDLQRDVLDQCATPVAVADDLRLMDARLFRPGVMKL
>Mature_547_residues
MKVITTAQAAALVQSGWTVASAGFVGAGHAEGVTEALEQRFLREALPRDLTLVYSAGQGDRGARGVNHFGNVGMTRAVVG
GHWRSATRLATLAMTEQCEGFNLPQGVLTHLYRAIAGGKPGVLTKIGLHTFVDPRVEKDARYHGGAVNQRARDAIAAGTA
NWVEAVDFRGDEYLFYPSFRIDCALIRCTASDTRGNLSTHREAFHHELLAMAQAAHNSGGIVIAQVESVVDYHETLQAIH
VPGILVDYVVVSEQPGHHLMTFAEAYNEAYVRPWRGEAAEAAERAKEAEVLPDASAQLDARTIVQRRAVMELAARKPRVV
NLGVGMPAAVGALAHQAGLGGFTLTVEAGPIGGTPADGLSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGHGN
VNVSKFGEGEGALIAGVGGFINITQSARAVVFMGTLTAGGLEVRVEQDQLRIAREGRVKKIVPEVSHLSFNGPYVASLGV
PVLYITERAVFEMRADAQGDARLTLVEIAPGVDLQRDVLDQCATPVAVADDLRLMDARLFRPGVMKL

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Escherichia coli, GI1787985, Length=548, Percent_Identity=37.043795620438, Blast_Score=340, Evalue=2e-94,
Organism=Drosophila melanogaster, GI24655794, Length=546, Percent_Identity=23.6263736263736, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI21358325, Length=546, Percent_Identity=23.6263736263736, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 58153; Mature: 58153

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVITTAQAAALVQSGWTVASAGFVGAGHAEGVTEALEQRFLREALPRDLTLVYSAGQGD
CCEEEHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
RGARGVNHFGNVGMTRAVVGGHWRSATRLATLAMTEQCEGFNLPQGVLTHLYRAIAGGKP
CCCCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
GVLTKIGLHTFVDPRVEKDARYHGGAVNQRARDAIAAGTANWVEAVDFRGDEYLFYPSFR
CCEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCE
IDCALIRCTASDTRGNLSTHREAFHHELLAMAQAAHNSGGIVIAQVESVVDYHETLQAIH
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHC
VPGILVDYVVVSEQPGHHLMTFAEAYNEAYVRPWRGEAAEAAERAKEAEVLPDASAQLDA
CCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH
RTIVQRRAVMELAARKPRVVNLGVGMPAAVGALAHQAGLGGFTLTVEAGPIGGTPADGLS
HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
FGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGHGNVNVSKFGEGEGALIAGVGGF
CCCCCCCHHHHCCCCCCCEECCCCCEEEEEEEEEECCCCCEEEEECCCCCCEEEEECCCE
INITQSARAVVFMGTLTAGGLEVRVEQDQLRIAREGRVKKIVPEVSHLSFNGPYVASLGV
EEECCCCCEEEEEEEECCCCEEEEEEHHHHHHHHCCCHHHHCCHHHHCCCCCCEEEECCC
PVLYITERAVFEMRADAQGDARLTLVEIAPGVDLQRDVLDQCATPVAVADDLRLMDARLF
CEEEEECHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHC
RPGVMKL
CCCCCCC
>Mature Secondary Structure
MKVITTAQAAALVQSGWTVASAGFVGAGHAEGVTEALEQRFLREALPRDLTLVYSAGQGD
CCEEEHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
RGARGVNHFGNVGMTRAVVGGHWRSATRLATLAMTEQCEGFNLPQGVLTHLYRAIAGGKP
CCCCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
GVLTKIGLHTFVDPRVEKDARYHGGAVNQRARDAIAAGTANWVEAVDFRGDEYLFYPSFR
CCEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCE
IDCALIRCTASDTRGNLSTHREAFHHELLAMAQAAHNSGGIVIAQVESVVDYHETLQAIH
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHC
VPGILVDYVVVSEQPGHHLMTFAEAYNEAYVRPWRGEAAEAAERAKEAEVLPDASAQLDA
CCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH
RTIVQRRAVMELAARKPRVVNLGVGMPAAVGALAHQAGLGGFTLTVEAGPIGGTPADGLS
HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
FGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGHGNVNVSKFGEGEGALIAGVGGF
CCCCCCCHHHHCCCCCCCEECCCCCEEEEEEEEEECCCCCEEEEECCCCCCEEEEECCCE
INITQSARAVVFMGTLTAGGLEVRVEQDQLRIAREGRVKKIVPEVSHLSFNGPYVASLGV
EEECCCCCEEEEEEEECCCCEEEEEEHHHHHHHHCCCHHHHCCHHHHCCCCCCEEEECCC
PVLYITERAVFEMRADAQGDARLTLVEIAPGVDLQRDVLDQCATPVAVADDLRLMDARLF
CEEEEECHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHC
RPGVMKL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]