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The map label for this gene is 94311438

Identifier: 94311438

GI number: 94311438

Start: 2715562

End: 2716914

Strand: Reverse

Name: 94311438

Synonym: Rmet_2502

Alternate gene names: NA

Gene position: 2716914-2715562 (Counterclockwise)

Preceding gene: 94311439

Following gene: 335055601

Centisome position: 69.17

GC content: 62.97

Gene sequence:

>1353_bases
ATGAAAGCAAGCAAGAAAGCAACAATGATGGTGGCGGCGTCGGCGCTGCTGGCGGCGTCGGCGTGGACCATCGGTGCGTT
CGCCGATGACCGGCAGGGCGATTCGGCAACTGCCGCGCCAGTGTCGGGCGCCGATGCGCAATTGGTCGAACGAGGCCGCT
ATCTCGCGACGGTGGCCGACTGCGCGGCGTGTCACACGGCGAAGAACGGGAAGCCGTTCGCAGGCGGTCTTGGCATCGAA
TCGCCGATTGGCCGGATCTATTCGACCAATATCACGCCGGACAAAAGCTCCGGCATCGGCAAGTTCAGCTACGACGATTT
CGATCGCGCCGTGCGCCACGGCATCGCCAGGGACGGCTCCACGCTGTACCCGGCCATGCCCTATGCCTCGTATGCGAAGG
TCAAGCCGTCCGACATGCAGGCGCTATACGCGTACTTCATGCATGGTGTGCAGCCAATCGAGCGGGCCAACAAGGCGACC
GATATTCCGTGGCCGCTGTCGATGCGCTGGCCACTGCGTTTCTGGCGCATGGCTTTCGCCCCGGAGGTGGCCACCGACGA
CCCACCGGTATCCAATGACCCGGTGGCGCGCGGCCGCTATCTGGTGGAGGGGCTCGCGCACTGCGGCGCTTGTCACACGC
CTCGTGGCTGGGGATTGCAGGAGAAGGCACTGAGCGATGACGGCAAGACCTATCTCTCGGGGGGCGTGATCGATAACTTC
CTGGCGAAGAACCTACGCGGCGACCAGAAGGATGGTCTCGGCACGTGGACGCAGGACGAGATCTTCGCGTTTCTGAAGAG
CGGGCGCACTAAGCATTCGGCGGCATTCGGCGGCATGTCGGAAGTGGTCGAGAACAGCATGCAGCACGTGAACGATGCTG
ACCTGACGGCGATTGCGGCATACCTGAAGACGCTGACCTCAGTGAATCCCAGTGCGGCCGTGTTGACGGCGAACGCCAGT
GCGACGGACAAGCTGCGTGCCGGAACGGATCGCAGCAACGGCGCGCTGACTTTTGTCGACAACTGCGCAGCATGTCATCG
CACGAGTGGCAGTGGCTACGAGAGTACGTTCCCGAGGATCGCGCTCAGCTCAACCGTGAACAGCAACGATCCAACGTCGC
TGATCCACATCGTCCTGATGGGTGGTGAGATGCCGTGGACGAAGACCGGCCCGACGCACTACGGGATGCCCGGATTCGCC
AAGCGTCTGACGGATCGGGATATCGCCGATGTGCTGACGTTCGTGCGGACGAGTTGGGGGAATCAGGCGCCGCCGGTAAG
CGCGGAGCAGGTGGCGAAGGTGCGCAAGTCAGTTGGCGCAGCGTCTCAGCCAAAACGGCCTGAGAACAACTGA

Upstream 100 bases:

>100_bases
ACCGGTCTGGTAGCCGCGCTTGCCTATCACTCCGCGAAGGCTATCCGCGAGCAGTACTTGAAGCACCCGGCGCCGCTGGT
TCAGGCTTGAGGTGATGGCC

Downstream 100 bases:

>100_bases
CGAACGGGGGTAGCGGGAGGCCGGCGCCTCCCGCTGCCCGCTGTCGGGGCTCTGGTTAGCCGAAGTTCGGCTGTGTGGCC
GCGTAGCTGGGCCGTGCCCG

Product: gluconate 2-dehydrogenase cytochrome c subunit

Products: NA

Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MKASKKATMMVAASALLAASAWTIGAFADDRQGDSATAAPVSGADAQLVERGRYLATVADCAACHTAKNGKPFAGGLGIE
SPIGRIYSTNITPDKSSGIGKFSYDDFDRAVRHGIARDGSTLYPAMPYASYAKVKPSDMQALYAYFMHGVQPIERANKAT
DIPWPLSMRWPLRFWRMAFAPEVATDDPPVSNDPVARGRYLVEGLAHCGACHTPRGWGLQEKALSDDGKTYLSGGVIDNF
LAKNLRGDQKDGLGTWTQDEIFAFLKSGRTKHSAAFGGMSEVVENSMQHVNDADLTAIAAYLKTLTSVNPSAAVLTANAS
ATDKLRAGTDRSNGALTFVDNCAACHRTSGSGYESTFPRIALSSTVNSNDPTSLIHIVLMGGEMPWTKTGPTHYGMPGFA
KRLTDRDIADVLTFVRTSWGNQAPPVSAEQVAKVRKSVGAASQPKRPENN

Sequences:

>Translated_450_residues
MKASKKATMMVAASALLAASAWTIGAFADDRQGDSATAAPVSGADAQLVERGRYLATVADCAACHTAKNGKPFAGGLGIE
SPIGRIYSTNITPDKSSGIGKFSYDDFDRAVRHGIARDGSTLYPAMPYASYAKVKPSDMQALYAYFMHGVQPIERANKAT
DIPWPLSMRWPLRFWRMAFAPEVATDDPPVSNDPVARGRYLVEGLAHCGACHTPRGWGLQEKALSDDGKTYLSGGVIDNF
LAKNLRGDQKDGLGTWTQDEIFAFLKSGRTKHSAAFGGMSEVVENSMQHVNDADLTAIAAYLKTLTSVNPSAAVLTANAS
ATDKLRAGTDRSNGALTFVDNCAACHRTSGSGYESTFPRIALSSTVNSNDPTSLIHIVLMGGEMPWTKTGPTHYGMPGFA
KRLTDRDIADVLTFVRTSWGNQAPPVSAEQVAKVRKSVGAASQPKRPENN
>Mature_450_residues
MKASKKATMMVAASALLAASAWTIGAFADDRQGDSATAAPVSGADAQLVERGRYLATVADCAACHTAKNGKPFAGGLGIE
SPIGRIYSTNITPDKSSGIGKFSYDDFDRAVRHGIARDGSTLYPAMPYASYAKVKPSDMQALYAYFMHGVQPIERANKAT
DIPWPLSMRWPLRFWRMAFAPEVATDDPPVSNDPVARGRYLVEGLAHCGACHTPRGWGLQEKALSDDGKTYLSGGVIDNF
LAKNLRGDQKDGLGTWTQDEIFAFLKSGRTKHSAAFGGMSEVVENSMQHVNDADLTAIAAYLKTLTSVNPSAAVLTANAS
ATDKLRAGTDRSNGALTFVDNCAACHRTSGSGYESTFPRIALSSTVNSNDPTSLIHIVLMGGEMPWTKTGPTHYGMPGFA
KRLTDRDIADVLTFVRTSWGNQAPPVSAEQVAKVRKSVGAASQPKRPENN

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 48062; Mature: 48062

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASKKATMMVAASALLAASAWTIGAFADDRQGDSATAAPVSGADAQLVERGRYLATVAD
CCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHH
CAACHTAKNGKPFAGGLGIESPIGRIYSTNITPDKSSGIGKFSYDDFDRAVRHGIARDGS
HHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
TLYPAMPYASYAKVKPSDMQALYAYFMHGVQPIERANKATDIPWPLSMRWPLRFWRMAFA
CCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHC
PEVATDDPPVSNDPVARGRYLVEGLAHCGACHTPRGWGLQEKALSDDGKTYLSGGVIDNF
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEECCCHHHHH
LAKNLRGDQKDGLGTWTQDEIFAFLKSGRTKHSAAFGGMSEVVENSMQHVNDADLTAIAA
HHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH
YLKTLTSVNPSAAVLTANASATDKLRAGTDRSNGALTFVDNCAACHRTSGSGYESTFPRI
HHHHHHCCCCCCEEEEECCCCCHHHHCCCCCCCCCEEEECCCHHHHCCCCCCCCHHCCCE
ALSSTVNSNDPTSLIHIVLMGGEMPWTKTGPTHYGMPGFAKRLTDRDIADVLTFVRTSWG
EEECCCCCCCCHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCC
NQAPPVSAEQVAKVRKSVGAASQPKRPENN
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKASKKATMMVAASALLAASAWTIGAFADDRQGDSATAAPVSGADAQLVERGRYLATVAD
CCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHH
CAACHTAKNGKPFAGGLGIESPIGRIYSTNITPDKSSGIGKFSYDDFDRAVRHGIARDGS
HHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
TLYPAMPYASYAKVKPSDMQALYAYFMHGVQPIERANKATDIPWPLSMRWPLRFWRMAFA
CCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHC
PEVATDDPPVSNDPVARGRYLVEGLAHCGACHTPRGWGLQEKALSDDGKTYLSGGVIDNF
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEECCCHHHHH
LAKNLRGDQKDGLGTWTQDEIFAFLKSGRTKHSAAFGGMSEVVENSMQHVNDADLTAIAA
HHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH
YLKTLTSVNPSAAVLTANASATDKLRAGTDRSNGALTFVDNCAACHRTSGSGYESTFPRI
HHHHHHCCCCCCEEEEECCCCCHHHHCCCCCCCCCEEEECCCHHHHCCCCCCCCHHCCCE
ALSSTVNSNDPTSLIHIVLMGGEMPWTKTGPTHYGMPGFAKRLTDRDIADVLTFVRTSWG
EEECCCCCCCCHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCC
NQAPPVSAEQVAKVRKSVGAASQPKRPENN
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]