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The map label for this gene is speE [H]

Identifier: 94311433

GI number: 94311433

Start: 2711585

End: 2712517

Strand: Reverse

Name: speE [H]

Synonym: Rmet_2497

Alternate gene names: 94311433

Gene position: 2712517-2711585 (Counterclockwise)

Preceding gene: 94311434

Following gene: 94311431

Centisome position: 69.05

GC content: 65.17

Gene sequence:

>933_bases
ATGATCCGCGCCTTGAGCGCGTTGTATTCCTCCATGACGCTTTTGAAACGCAAATCTATCGAGGCCGTGGCCTCGCGCCG
CCCCGCGCGCGGCGAACGTGAAACCTCGCGCAGGAAGCTGTCCGGCGACGCCGGCGATGTCGACAATGCCGGCGAGAAGC
GCATGACGCCGCGCTTCGCGCCGGTGACGTTCTCGGAAATGGATGGCGTGCGCTATCTCCATTTCGGCACCGAGTGGGTG
CAGGGCGCGATGCGCCTGCGCAAGCCCGATGCCATCGAACTCGAGTACGCCCAGCAGATGATGGCCTGGCTGCTGTTCCT
GTCGCCGTCGGCTGCGGATTTCCACGTGGCGCAACTGGGCCTGGGCGCCGCCGCGCTGACCAAGTTCTGCCATCGCCAAT
TCGCCCGTGCGAAGGTAACGGCCGTCGAGTTGAATCCCGCCGTGATCGTGGCCGGCCGCAGCATGTTCGGCCTGCGCGAG
GACGATGCGCGCCTGTCCGTGCGCGAGCAGGATGCATGGGACTTCGTGATGGATGGCGCGCAGACAGCGTCGATCGACGC
GTTGCAGGTCGACCTGTACGACGCCACCGCGCGTGGCCCGGTCCTCGATACCACGGCGTTCTATCGTGCCTGCCGTCGCG
TGCTCAAGGCGCCTGGCGTGATGACGATCAACCTGTTCGGAGACCACGAGAGTTTCCCGAAGAACATCGTGCGTATCTGC
GACGCGTTCGACAATCGCGTGCTGGTGTTCCCCGAAGTGCATGACGGCAACATCATCGCGCTGGCGTTCAACGGGCCGGC
GATCGACGTGTCTTGGGAAACGCTGGAGGCGAGGGCGGAAGTGGTGGAGGCCACCACGAAGCTGCCGGCGAAGGACTGGG
TGAAGAAGCTGCGCGCGGCGAATGCGCGGCAGGAAGAGCGGCTGGCGATCTGA

Upstream 100 bases:

>100_bases
CGCTGTACTCGGAAATTGTTCACGACGCGCGCCACTGGCCGCGTCACGCCCGCGAGCACAATCGCGAATGGCTCCAGCGC
GCGCAGGTCGCGCTGGGCCA

Downstream 100 bases:

>100_bases
CGTCGCGCTTTATCCCCTCTCCCACCAGGTGGGAGAGGGGAGCCAGGCCAGCATCATTCCTTATGGAAGAACTGCGCCAG
CGACCACTCGTCGGTGCGCG

Product: spermidine synthase-like protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MIRALSALYSSMTLLKRKSIEAVASRRPARGERETSRRKLSGDAGDVDNAGEKRMTPRFAPVTFSEMDGVRYLHFGTEWV
QGAMRLRKPDAIELEYAQQMMAWLLFLSPSAADFHVAQLGLGAAALTKFCHRQFARAKVTAVELNPAVIVAGRSMFGLRE
DDARLSVREQDAWDFVMDGAQTASIDALQVDLYDATARGPVLDTTAFYRACRRVLKAPGVMTINLFGDHESFPKNIVRIC
DAFDNRVLVFPEVHDGNIIALAFNGPAIDVSWETLEARAEVVEATTKLPAKDWVKKLRAANARQEERLAI

Sequences:

>Translated_310_residues
MIRALSALYSSMTLLKRKSIEAVASRRPARGERETSRRKLSGDAGDVDNAGEKRMTPRFAPVTFSEMDGVRYLHFGTEWV
QGAMRLRKPDAIELEYAQQMMAWLLFLSPSAADFHVAQLGLGAAALTKFCHRQFARAKVTAVELNPAVIVAGRSMFGLRE
DDARLSVREQDAWDFVMDGAQTASIDALQVDLYDATARGPVLDTTAFYRACRRVLKAPGVMTINLFGDHESFPKNIVRIC
DAFDNRVLVFPEVHDGNIIALAFNGPAIDVSWETLEARAEVVEATTKLPAKDWVKKLRAANARQEERLAI
>Mature_310_residues
MIRALSALYSSMTLLKRKSIEAVASRRPARGERETSRRKLSGDAGDVDNAGEKRMTPRFAPVTFSEMDGVRYLHFGTEWV
QGAMRLRKPDAIELEYAQQMMAWLLFLSPSAADFHVAQLGLGAAALTKFCHRQFARAKVTAVELNPAVIVAGRSMFGLRE
DDARLSVREQDAWDFVMDGAQTASIDALQVDLYDATARGPVLDTTAFYRACRRVLKAPGVMTINLFGDHESFPKNIVRIC
DAFDNRVLVFPEVHDGNIIALAFNGPAIDVSWETLEARAEVVEATTKLPAKDWVKKLRAANARQEERLAI

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 34474; Mature: 34474

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRALSALYSSMTLLKRKSIEAVASRRPARGERETSRRKLSGDAGDVDNAGEKRMTPRFA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PVTFSEMDGVRYLHFGTEWVQGAMRLRKPDAIELEYAQQMMAWLLFLSPSAADFHVAQLG
CCCHHHCCCEEEEECCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCEEHHHHC
LGAAALTKFCHRQFARAKVTAVELNPAVIVAGRSMFGLREDDARLSVREQDAWDFVMDGA
CCHHHHHHHHHHHHHHHEEEEEEECCEEEEECCHHCCCCCCCCEEEEECCCCHHHHHCCC
QTASIDALQVDLYDATARGPVLDTTAFYRACRRVLKAPGVMTINLFGDHESFPKNIVRIC
CCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH
DAFDNRVLVFPEVHDGNIIALAFNGPAIDVSWETLEARAEVVEATTKLPAKDWVKKLRAA
HHCCCCEEEEEEECCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
NARQEERLAI
CCCCHHCCCC
>Mature Secondary Structure
MIRALSALYSSMTLLKRKSIEAVASRRPARGERETSRRKLSGDAGDVDNAGEKRMTPRFA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PVTFSEMDGVRYLHFGTEWVQGAMRLRKPDAIELEYAQQMMAWLLFLSPSAADFHVAQLG
CCCHHHCCCEEEEECCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCEEHHHHC
LGAAALTKFCHRQFARAKVTAVELNPAVIVAGRSMFGLREDDARLSVREQDAWDFVMDGA
CCHHHHHHHHHHHHHHHEEEEEEECCEEEEECCHHCCCCCCCCEEEEECCCCHHHHHCCC
QTASIDALQVDLYDATARGPVLDTTAFYRACRRVLKAPGVMTINLFGDHESFPKNIVRIC
CCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH
DAFDNRVLVFPEVHDGNIIALAFNGPAIDVSWETLEARAEVVEATTKLPAKDWVKKLRAA
HHCCCCEEEEEEECCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
NARQEERLAI
CCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]