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The map label for this gene is fdxA [H]

Identifier: 94311387

GI number: 94311387

Start: 2662904

End: 2663227

Strand: Direct

Name: fdxA [H]

Synonym: Rmet_2451

Alternate gene names: 94311387

Gene position: 2662904-2663227 (Clockwise)

Preceding gene: 335055600

Following gene: 94311388

Centisome position: 67.79

GC content: 60.19

Gene sequence:

>324_bases
ATGACTCACGTTGTCACCGAATCCTGCATCCGTTGCCGCTATACCGACTGCGTTGATGTGTGTCCGGTCGATTGTTTCCG
CGAAGGCCCGAACTTCCTGTCCATCGACCCGGACGAATGCATCGACTGCGCCGTGTGCGTGGCCGAGTGCCCGGTCAACG
CGATCTACGCCGAGGAAGACGTGCCGGGCGATCAGCAACAGTTCATCGAACTGAATGCCGAACTCTCCCGGATCTGGCCG
TCCATCACCAAGACCAAGGCCCCGCTGGCCGAAGCCGAGGAATGGAAGGACGCCACCGACAAGCTGCAATACCTGCAGCG
CTAA

Upstream 100 bases:

>100_bases
CTGCGCTTGACGCATGTCGGGTGACTGGCGGGAACGCCGGGCAAGAATGCGGCCTTGGACCTCCCCCATTTGAAGACCGA
TCCGTTTTTCTGGAACCGAA

Downstream 100 bases:

>100_bases
AAAAATACAGAGAGCCGTCCCCCGCGCTTTCTAGCAATGCCGGGCACATGTGTGCCCACAACGTATCAGGACGAATATGG
ACTTGAGCATTCCTAACCCC

Product: Ferredoxin

Products: NA

Alternate protein names: Ferredoxin I; FdI [H]

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTHVVTESCIRCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEEDVPGDQQQFIELNAELSRIWP
SITKTKAPLAEAEEWKDATDKLQYLQR

Sequences:

>Translated_107_residues
MTHVVTESCIRCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEEDVPGDQQQFIELNAELSRIWP
SITKTKAPLAEAEEWKDATDKLQYLQR
>Mature_106_residues
THVVTESCIRCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEEDVPGDQQQFIELNAELSRIWPS
ITKTKAPLAEAEEWKDATDKLQYLQR

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin could play a role in regulating gene expression by interacting directly with DNA [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813
- InterPro:   IPR022569 [H]

Pfam domain/function: PF11953 DUF3470 [H]

EC number: NA

Molecular weight: Translated: 12118; Mature: 11986

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
8.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHVVTESCIRCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEED
CCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCEECCCC
VPGDQQQFIELNAELSRIWPSITKTKAPLAEAEEWKDATDKLQYLQR
CCCCHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
THVVTESCIRCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEED
CCCHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCEECCCC
VPGDQQQFIELNAELSRIWPSITKTKAPLAEAEEWKDATDKLQYLQR
CCCCHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2826477; 8244942; 6848518; 7120409; 3422475; 2926817; 9600844; 10387068; 10593945; 1855590; 2153958; 1657971; 8132582 [H]